RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 SHISA2Q6UWI4 295 aa9.55□□□□□ -0.88
LDLRAD3-202ENST00000524419 TOMM7Q9P0U1 55 aa9.55□□□□□ -0.88
LDLRAD3-202ENST00000524419 A0A087WZ39 114 aa9.54□□□□□ -0.88
LDLRAD3-202ENST00000524419 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
LDLRAD3-202ENST00000524419 COX7A2LO14548 114 aa9.54□□□□□ -0.88
LDLRAD3-202ENST00000524419 SS18Q15532 418 aa9.54□□□□□ -0.88
LDLRAD3-202ENST00000524419 CKS1BP61024 79 aa9.54□□□□□ -0.88
LDLRAD3-202ENST00000524419 TRAV26-1A0A087WT03 109 aa9.53□□□□□ -0.88
LDLRAD3-202ENST00000524419 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
LDLRAD3-202ENST00000524419 C5orf38Q86SI9 138 aa9.52□□□□□ -0.89
LDLRAD3-202ENST00000524419 HTN3P15516 51 aa9.52□□□□□ -0.89
LDLRAD3-202ENST00000524419 KRTAP24-1Q3LI83 254 aa9.52□□□□□ -0.89
LDLRAD3-202ENST00000524419 XCL1P47992 114 aa9.51□□□□□ -0.89
LDLRAD3-202ENST00000524419 COL6A5A8TX70 2615 aa9.51□□□□□ -0.89
LDLRAD3-202ENST00000524419 CLPSL2Q6UWE3 100 aa9.5□□□□□ -0.89
LDLRAD3-202ENST00000524419 TRAV13-2A0A0B4J235 113 aa9.5□□□□□ -0.89
LDLRAD3-202ENST00000524419 MRPL23Q16540 153 aaKnown RBP9.5□□□□□ -0.89
LDLRAD3-202ENST00000524419 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
LDLRAD3-202ENST00000524419 TRRAPQ9Y4A5 3859 aa9.49□□□□□ -0.89
LDLRAD3-202ENST00000524419 FAM240AA0A1B0GVK7 77 aa9.49□□□□□ -0.89
LDLRAD3-202ENST00000524419 TRACP01848 142 aa9.49□□□□□ -0.89
LDLRAD3-202ENST00000524419 SNCGO76070 127 aa9.48□□□□□ -0.89
LDLRAD3-202ENST00000524419 KRTAP10-11P60412 298 aa9.48□□□□□ -0.89
LDLRAD3-202ENST00000524419 LINC01561Q8N1V8 128 aa9.48□□□□□ -0.89
LDLRAD3-202ENST00000524419 C3orf56Q8N813 242 aa9.48□□□□□ -0.89
LDLRAD3-202ENST00000524419 LINC00269Q8N2A0 174 aa9.48□□□□□ -0.89
LDLRAD3-202ENST00000524419 MIR7-3HGQ8N6C7 128 aa9.48□□□□□ -0.89
LDLRAD3-202ENST00000524419 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
LDLRAD3-202ENST00000524419 ANGP03950 147 aaKnown RBP9.47□□□□□ -0.89
LDLRAD3-202ENST00000524419 LINC00158P58513 81 aa9.47□□□□□ -0.89
LDLRAD3-202ENST00000524419 CRPP02741 224 aa9.46□□□□□ -0.89
LDLRAD3-202ENST00000524419 RPL28P46779 137 aaKnown RBP9.46□□□□□ -0.89
LDLRAD3-202ENST00000524419 EGFEM1PQ0D2K5 195 aa9.46□□□□□ -0.9
LDLRAD3-202ENST00000524419 C6orf226Q5I0X4 101 aa9.46□□□□□ -0.9
LDLRAD3-202ENST00000524419 LELP1Q5T871 98 aa9.46□□□□□ -0.9
LDLRAD3-202ENST00000524419 Q6Q795 121 aa9.46□□□□□ -0.9
LDLRAD3-202ENST00000524419 Q8IZM0 81 aa9.46□□□□□ -0.9
LDLRAD3-202ENST00000524419 C11orf68Q9H3H3 251 aaKnown RBP9.46□□□□□ -0.9
LDLRAD3-202ENST00000524419 SND1-IT1Q9HBX3 110 aa9.46□□□□□ -0.9
LDLRAD3-202ENST00000524419 GAGE2BQ13066 116 aa9.45□□□□□ -0.9
LDLRAD3-202ENST00000524419 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
LDLRAD3-202ENST00000524419 CD164L2Q6UWJ8 174 aa9.45□□□□□ -0.9
LDLRAD3-202ENST00000524419 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
LDLRAD3-202ENST00000524419 REG3AQ06141 175 aa9.44□□□□□ -0.9
LDLRAD3-202ENST00000524419 C15orf53Q8NAA6 179 aa9.44□□□□□ -0.9
LDLRAD3-202ENST00000524419 RETNQ9HD89 108 aa9.44□□□□□ -0.9
LDLRAD3-202ENST00000524419 STAB1Q9NY15 2570 aa9.44□□□□□ -0.9
LDLRAD3-202ENST00000524419 IGKV2-28A0A075B6P5 120 aa9.44□□□□□ -0.9
LDLRAD3-202ENST00000524419 IGKV2D-28P01615 120 aa9.44□□□□□ -0.9
LDLRAD3-202ENST00000524419 Q8N3U1 123 aa9.44□□□□□ -0.9
LDLRAD3-202ENST00000524419 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
LDLRAD3-202ENST00000524419 FBN1P35555 2871 aaKnown RBP9.44□□□□□ -0.9
LDLRAD3-202ENST00000524419 LINC00337Q8N6G1 96 aa9.43□□□□□ -0.9
LDLRAD3-202ENST00000524419 ACYP1P07311 99 aa9.43□□□□□ -0.9
LDLRAD3-202ENST00000524419 PFN2P35080 140 aa9.43□□□□□ -0.9
LDLRAD3-202ENST00000524419 BAALC-AS2P0C853 105 aa9.42□□□□□ -0.9
LDLRAD3-202ENST00000524419 CCL18P55774 89 aa9.42□□□□□ -0.9
LDLRAD3-202ENST00000524419 IGLV10-54A0A075B6I4 117 aa9.41□□□□□ -0.9
LDLRAD3-202ENST00000524419 CFAP161Q6P656 301 aa9.41□□□□□ -0.9
LDLRAD3-202ENST00000524419 FAM218AQ96MZ4 157 aa9.41□□□□□ -0.9
LDLRAD3-202ENST00000524419 CMYA5Q8N3K9 4069 aa9.41□□□□□ -0.9
LDLRAD3-202ENST00000524419 MALP21145 153 aa9.41□□□□□ -0.9
LDLRAD3-202ENST00000524419 ANAPC13Q9BS18 74 aa9.41□□□□□ -0.9
LDLRAD3-202ENST00000524419 CXCL5P42830 114 aa9.4□□□□□ -0.9
LDLRAD3-202ENST00000524419 H0YGX0 51 aa9.39□□□□□ -0.91
LDLRAD3-202ENST00000524419 SMIM11BQ8TCY0 68 aa9.39□□□□□ -0.91
LDLRAD3-202ENST00000524419 LYPD5Q6UWN5 251 aa9.39□□□□□ -0.91
LDLRAD3-202ENST00000524419 H3BNG1 76 aa9.38□□□□□ -0.91
LDLRAD3-202ENST00000524419 KIAA0087Q14695 138 aa9.37□□□□□ -0.91
LDLRAD3-202ENST00000524419 TTC32Q5I0X7 151 aa9.37□□□□□ -0.91
LDLRAD3-202ENST00000524419 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
LDLRAD3-202ENST00000524419 PKD1L1Q8TDX9 2849 aa9.37□□□□□ -0.91
LDLRAD3-202ENST00000524419 NDUFV3P56181 108 aaKnown RBP9.37□□□□□ -0.91
LDLRAD3-202ENST00000524419 KPRPQ5T749 579 aaPredicted RBP9.37□□□□□ -0.91
LDLRAD3-202ENST00000524419 KLK12Q9UKR0 248 aa9.37□□□□□ -0.91
LDLRAD3-202ENST00000524419 Q6ZTC4 211 aa9.36□□□□□ -0.91
LDLRAD3-202ENST00000524419 PRR34Q9NV39 138 aa9.36□□□□□ -0.91
LDLRAD3-202ENST00000524419 INAFM2P0DMQ5 153 aa9.35□□□□□ -0.91
LDLRAD3-202ENST00000524419 DNAH3Q8TD57 4116 aa9.35□□□□□ -0.91
LDLRAD3-202ENST00000524419 TRBV7-7A0A0K0K1E9 115 aa9.35□□□□□ -0.91
LDLRAD3-202ENST00000524419 COX17Q14061 63 aa9.35□□□□□ -0.91
LDLRAD3-202ENST00000524419 DNAL4O96015 105 aa9.34□□□□□ -0.91
LDLRAD3-202ENST00000524419 NHLRC4P0CG21 123 aaPredicted RBP9.34□□□□□ -0.91
LDLRAD3-202ENST00000524419 Q9HAA7 133 aa9.34□□□□□ -0.91
LDLRAD3-202ENST00000524419 KLK5Q9Y337 293 aaPredicted RBP9.34□□□□□ -0.91
LDLRAD3-202ENST00000524419 A0A0J9YWU9 116 aa9.33□□□□□ -0.92
LDLRAD3-202ENST00000524419 SPAG11BQ08648 103 aa9.33□□□□□ -0.92
LDLRAD3-202ENST00000524419 A0A087WYN8 130 aa9.33□□□□□ -0.92
LDLRAD3-202ENST00000524419 ENHOQ6UWT2 76 aa9.33□□□□□ -0.92
LDLRAD3-202ENST00000524419 OR13C6PQ8NH95 151 aa9.33□□□□□ -0.92
LDLRAD3-202ENST00000524419 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
LDLRAD3-202ENST00000524419 ANK2Q01484 3957 aa9.32□□□□□ -0.92
LDLRAD3-202ENST00000524419 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
LDLRAD3-202ENST00000524419 LINC00643Q86TS7 51 aa9.31□□□□□ -0.92
LDLRAD3-202ENST00000524419 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
LDLRAD3-202ENST00000524419 NDUFC2O95298 119 aa9.3□□□□□ -0.92
LDLRAD3-202ENST00000524419 NANOS2P60321 138 aaKnown RBP9.3□□□□□ -0.92
LDLRAD3-202ENST00000524419 C11orf45Q8TAV5 145 aa9.3□□□□□ -0.92
LDLRAD3-202ENST00000524419 DEFB131BA0A096LNP1 70 aa9.29□□□□□ -0.92
LDLRAD3-202ENST00000524419 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms