RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 C15orf56Q8N910 161 aa6.18□□□□□ -1.42
SDCBP-212ENST00000523483 LINC00158P58513 81 aa6.18□□□□□ -1.42
SDCBP-212ENST00000523483 SRSF9Q13242 221 aaKnown RBP eCLIP6.18□□□□□ -1.42
SDCBP-212ENST00000523483 C10orf25Q5T742 122 aa6.18□□□□□ -1.42
SDCBP-212ENST00000523483 BOD1L2Q8IYS8 172 aa6.17□□□□□ -1.42
SDCBP-212ENST00000523483 Q8IZM0 81 aa6.17□□□□□ -1.42
SDCBP-212ENST00000523483 MIEN1Q9BRT3 115 aa6.17□□□□□ -1.42
SDCBP-212ENST00000523483 LINC01620Q4KN68 170 aa6.17□□□□□ -1.42
SDCBP-212ENST00000523483 VPS13DQ5THJ4 4388 aa6.17□□□□□ -1.42
SDCBP-212ENST00000523483 SMIM13P0DJ93 91 aa6.16□□□□□ -1.42
SDCBP-212ENST00000523483 HIST1H4GQ99525 98 aa6.16□□□□□ -1.42
SDCBP-212ENST00000523483 A0A0J9YXY3 114 aa6.16□□□□□ -1.42
SDCBP-212ENST00000523483 NDUFA1O15239 70 aa6.16□□□□□ -1.42
SDCBP-212ENST00000523483 DDTP30046 118 aa6.16□□□□□ -1.42
SDCBP-212ENST00000523483 CTAG1AP78358 180 aa6.16□□□□□ -1.42
SDCBP-212ENST00000523483 Q6ZR54 194 aa6.16□□□□□ -1.42
SDCBP-212ENST00000523483 KIAA0087Q14695 138 aa6.16□□□□□ -1.42
SDCBP-212ENST00000523483 Q6ZRU5 148 aa6.16□□□□□ -1.42
SDCBP-212ENST00000523483 GCSHP23434 173 aa6.15□□□□□ -1.43
SDCBP-212ENST00000523483 SYCNQ0VAF6 134 aa6.15□□□□□ -1.43
SDCBP-212ENST00000523483 CIRBPQ14011 172 aaKnown RBP6.15□□□□□ -1.43
SDCBP-212ENST00000523483 GAGE2EQ4V326 116 aa6.15□□□□□ -1.43
SDCBP-212ENST00000523483 GAGE2DQ9UEU5 116 aa6.15□□□□□ -1.43
SDCBP-212ENST00000523483 LCE6AA0A183 80 aa6.14□□□□□ -1.43
SDCBP-212ENST00000523483 HINT1P49773 126 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-212ENST00000523483 RPL18AQ02543 176 aaKnown RBP6.14□□□□□ -1.43
SDCBP-212ENST00000523483 ERG28Q9UKR5 140 aa6.14□□□□□ -1.43
SDCBP-212ENST00000523483 HYDINQ4G0P3 5121 aa6.14□□□□□ -1.43
SDCBP-212ENST00000523483 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
SDCBP-212ENST00000523483 TNP2Q05952 138 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 C2orf91Q6ZV80 131 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 MIR7-3HGQ8N6C7 128 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 NTN5Q8WTR8 489 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-212ENST00000523483 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 ADAMTSL4-AS1Q5T5F5 129 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-212ENST00000523483 XAGE1AQ9HD64 81 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 GVQW2A0A096LPI5 108 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-212ENST00000523483 TMEM238C9JI98 176 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 CXCL5P42830 114 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 PTTG1IPP53801 180 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 C6orf48Q9UBA6 75 aa6.13□□□□□ -1.43
SDCBP-212ENST00000523483 IGKV2-24A0A0C4DH68 120 aa6.12□□□□□ -1.43
SDCBP-212ENST00000523483 HERV-K104P63124 156 aa6.12□□□□□ -1.43
SDCBP-212ENST00000523483 LINC01561Q8N1V8 128 aa6.12□□□□□ -1.43
SDCBP-212ENST00000523483 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-212ENST00000523483 SLPIP03973 132 aa6.12□□□□□ -1.43
SDCBP-212ENST00000523483 A0A087WTM6 91 aa6.12□□□□□ -1.43
SDCBP-212ENST00000523483 GAGE2BQ13066 116 aa6.12□□□□□ -1.43
SDCBP-212ENST00000523483 DPH3Q96FX2 82 aa6.12□□□□□ -1.43
SDCBP-212ENST00000523483 EREGO14944 169 aa6.11□□□□□ -1.43
SDCBP-212ENST00000523483 DLEU1O43261 78 aa6.11□□□□□ -1.43
SDCBP-212ENST00000523483 C14orf177Q52M58 125 aa6.11□□□□□ -1.43
SDCBP-212ENST00000523483 DNAH2Q9P225 4427 aa6.1□□□□□ -1.43
SDCBP-212ENST00000523483 LRCOL1A6NCL2 159 aa6.1□□□□□ -1.43
SDCBP-212ENST00000523483 RTL8CO15255 209 aa6.1□□□□□ -1.43
SDCBP-212ENST00000523483 LINC00587B1AMM8 73 aa6.1□□□□□ -1.43
SDCBP-212ENST00000523483 EIF4EBP3O60516 100 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-212ENST00000523483 MUSTN1Q8IVN3 82 aa6.1□□□□□ -1.43
SDCBP-212ENST00000523483 C2orf48Q96LS8 159 aa6.1□□□□□ -1.43
SDCBP-212ENST00000523483 SFTA2Q6UW10 78 aa6.09□□□□□ -1.43
SDCBP-212ENST00000523483 Q8N814 137 aa6.09□□□□□ -1.43
SDCBP-212ENST00000523483 SACSQ9NZJ4 4579 aa6.09□□□□□ -1.43
SDCBP-212ENST00000523483 HSD52Q0P140 79 aa6.08□□□□□ -1.44
SDCBP-212ENST00000523483 H7C2G1 150 aa6.08□□□□□ -1.44
SDCBP-212ENST00000523483 FXYD2P54710 66 aa6.08□□□□□ -1.44
SDCBP-212ENST00000523483 IGLV5-52A0A0A0MRZ9 124 aa6.07□□□□□ -1.44
SDCBP-212ENST00000523483 TRBV30A0A0K0K1B3 111 aa6.07□□□□□ -1.44
SDCBP-212ENST00000523483 LITAFQ99732 161 aa6.07□□□□□ -1.44
SDCBP-212ENST00000523483 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
SDCBP-212ENST00000523483 Q6ZRP5 223 aa6.07□□□□□ -1.44
SDCBP-212ENST00000523483 HIGD1BQ9P298 99 aa6.07□□□□□ -1.44
SDCBP-212ENST00000523483 ALMS1Q8TCU4 4167 aa6.07□□□□□ -1.44
SDCBP-212ENST00000523483 CHTF8P0CG12 524 aa6.07□□□□□ -1.44
SDCBP-212ENST00000523483 PRR3P79522 188 aaKnown RBP6.07□□□□□ -1.44
SDCBP-212ENST00000523483 LINC00308Q8TCZ7 52 aa6.07□□□□□ -1.44
SDCBP-212ENST00000523483 SND1-IT1Q9HBX3 110 aa6.07□□□□□ -1.44
SDCBP-212ENST00000523483 A4D1N5 150 aa6.06□□□□□ -1.44
SDCBP-212ENST00000523483 NDUFC2-KCTD14E9PQ53 114 aa6.06□□□□□ -1.44
SDCBP-212ENST00000523483 K7ERJ3 54 aa6.06□□□□□ -1.44
SDCBP-212ENST00000523483 CEND1Q8N111 149 aa6.06□□□□□ -1.44
SDCBP-212ENST00000523483 RAB37Q96AX2 223 aa6.06□□□□□ -1.44
SDCBP-212ENST00000523483 SOSTDC1Q6X4U4 206 aa6.06□□□□□ -1.44
SDCBP-212ENST00000523483 M0R143 59 aa6.05□□□□□ -1.44
SDCBP-212ENST00000523483 OR13C6PQ8NH95 151 aa6.05□□□□□ -1.44
SDCBP-212ENST00000523483 RPL24P83731 157 aaKnown RBP6.05□□□□□ -1.44
SDCBP-212ENST00000523483 GAGE10A6NGK3 116 aa6.05□□□□□ -1.44
SDCBP-212ENST00000523483 NCR3O14931 201 aa6.05□□□□□ -1.44
SDCBP-212ENST00000523483 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
SDCBP-212ENST00000523483 BVES-AS1Q5T3Y7 98 aa6.05□□□□□ -1.44
SDCBP-212ENST00000523483 A6NDN8 102 aa6.04□□□□□ -1.44
SDCBP-212ENST00000523483 COX17Q14061 63 aa6.04□□□□□ -1.44
SDCBP-212ENST00000523483 FAM19A5Q7Z5A7 132 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-212ENST00000523483 TIMM17BO60830 172 aa6.04□□□□□ -1.44
SDCBP-212ENST00000523483 SPANXB1Q9NS25 103 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-212ENST00000523483 FRAS1Q86XX4 4008 aa6.04□□□□□ -1.44
SDCBP-212ENST00000523483 A0A096LNI7 61 aa6.03□□□□□ -1.44
SDCBP-212ENST00000523483 LOC107984640A0A0U1RRK4 108 aa6.03□□□□□ -1.44
SDCBP-212ENST00000523483 NAA38Q9BRA0 125 aaKnown RBP6.03□□□□□ -1.44
SDCBP-212ENST00000523483 SPANXDQ9BXN6 97 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms