RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 E9PLD3 99 aa9.94□□□□□ -0.82
LSM1-203ENST00000520755 LINC01620Q4KN68 170 aa9.94□□□□□ -0.82
LSM1-203ENST00000520755 C2orf82Q6UX34 121 aa9.94□□□□□ -0.82
LSM1-203ENST00000520755 ZNF561-AS1K7EIQ3 104 aa9.93□□□□□ -0.82
LSM1-203ENST00000520755 LEPROTO15243 131 aa9.93□□□□□ -0.82
LSM1-203ENST00000520755 KRTAP10-1P60331 282 aa9.92□□□□□ -0.82
LSM1-203ENST00000520755 HERVK_113P61574 105 aa9.92□□□□□ -0.82
LSM1-203ENST00000520755 C10orf25Q5T742 122 aa9.92□□□□□ -0.82
LSM1-203ENST00000520755 C2orf48Q96LS8 159 aa9.92□□□□□ -0.82
LSM1-203ENST00000520755 CNBPP62633 177 aaKnown RBP9.91□□□□□ -0.82
LSM1-203ENST00000520755 Q6ZRU5 148 aa9.91□□□□□ -0.82
LSM1-203ENST00000520755 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.9□□□□□ -0.82
LSM1-203ENST00000520755 J3QQQ9 107 aa9.9□□□□□ -0.82
LSM1-203ENST00000520755 PRSS2P07478 247 aa9.9□□□□□ -0.82
LSM1-203ENST00000520755 UNQ6190/PRO20217Q6UXQ8 127 aa9.9□□□□□ -0.82
LSM1-203ENST00000520755 PLEKHB2Q96CS7 222 aa9.9□□□□□ -0.82
LSM1-203ENST00000520755 ZNF625Q96I27 306 aaPredicted RBP9.9□□□□□ -0.82
LSM1-203ENST00000520755 CAMK2N2Q96S95 79 aa9.9□□□□□ -0.82
LSM1-203ENST00000520755 TTTY13Q9BZ97 58 aa9.9□□□□□ -0.82
LSM1-203ENST00000520755 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
LSM1-203ENST00000520755 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
LSM1-203ENST00000520755 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
LSM1-203ENST00000520755 C6orf48Q9UBA6 75 aa9.89□□□□□ -0.83
LSM1-203ENST00000520755 NDUFA1O15239 70 aa9.88□□□□□ -0.83
LSM1-203ENST00000520755 CXCL5P42830 114 aa9.88□□□□□ -0.83
LSM1-203ENST00000520755 C9orf163Q8N9P6 203 aa9.88□□□□□ -0.83
LSM1-203ENST00000520755 F8WDY8 70 aa9.87□□□□□ -0.83
LSM1-203ENST00000520755 CKS1BP61024 79 aa9.87□□□□□ -0.83
LSM1-203ENST00000520755 APOBP04114 4563 aaKnown RBP9.86□□□□□ -0.83
LSM1-203ENST00000520755 NMUP48645 174 aa9.86□□□□□ -0.83
LSM1-203ENST00000520755 C9orf116Q5BN46 136 aaPredicted RBP9.86□□□□□ -0.83
LSM1-203ENST00000520755 NDUFA12Q9UI09 145 aa9.86□□□□□ -0.83
LSM1-203ENST00000520755 KIAA1109Q2LD37 5005 aa9.86□□□□□ -0.83
LSM1-203ENST00000520755 LGALS3P17931 250 aaKnown RBP9.85□□□□□ -0.83
LSM1-203ENST00000520755 PCP2Q8IVA1 136 aa9.85□□□□□ -0.83
LSM1-203ENST00000520755 VAMP8Q9BV40 100 aa9.85□□□□□ -0.83
LSM1-203ENST00000520755 TP73-AS1Q9UF72 201 aa9.85□□□□□ -0.83
LSM1-203ENST00000520755 PAM16Q9Y3D7 125 aa9.85□□□□□ -0.83
LSM1-203ENST00000520755 DNAH8Q96JB1 4490 aa9.85□□□□□ -0.83
LSM1-203ENST00000520755 TRBV30A0A0K0K1B3 111 aa9.84□□□□□ -0.83
LSM1-203ENST00000520755 HSBP1L1C9JCN9 74 aa9.84□□□□□ -0.83
LSM1-203ENST00000520755 SMIM6P0DI80 62 aa9.84□□□□□ -0.83
LSM1-203ENST00000520755 RNF151Q2KHN1 245 aa9.83□□□□□ -0.84
LSM1-203ENST00000520755 SPATA45Q537H7 98 aa9.83□□□□□ -0.84
LSM1-203ENST00000520755 FAM30AQ9NZY2 134 aa9.83□□□□□ -0.84
LSM1-203ENST00000520755 RYR1P21817 5038 aa9.82□□□□□ -0.84
LSM1-203ENST00000520755 MYMXA0A1B0GTQ4 84 aa9.81□□□□□ -0.84
LSM1-203ENST00000520755 ZNF815PA8K554 130 aa9.81□□□□□ -0.84
LSM1-203ENST00000520755 CDK2AP2O75956 126 aa9.81□□□□□ -0.84
LSM1-203ENST00000520755 HAMPP81172 84 aa9.81□□□□□ -0.84
LSM1-203ENST00000520755 SFTA2Q6UW10 78 aa9.81□□□□□ -0.84
LSM1-203ENST00000520755 SDIM1Q6ZPB5 146 aa9.81□□□□□ -0.84
LSM1-203ENST00000520755 A0A0J9YXY3 114 aa9.8□□□□□ -0.84
LSM1-203ENST00000520755 HERV-K104P63124 156 aa9.8□□□□□ -0.84
LSM1-203ENST00000520755 ERG28Q9UKR5 140 aa9.8□□□□□ -0.84
LSM1-203ENST00000520755 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
LSM1-203ENST00000520755 Q6ZSA8 131 aa9.79□□□□□ -0.84
LSM1-203ENST00000520755 A0A096LNI7 61 aa9.78□□□□□ -0.84
LSM1-203ENST00000520755 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
LSM1-203ENST00000520755 COX8AP10176 69 aa9.78□□□□□ -0.84
LSM1-203ENST00000520755 XGP55808 180 aa9.78□□□□□ -0.84
LSM1-203ENST00000520755 Q6ZRP5 223 aa9.78□□□□□ -0.84
LSM1-203ENST00000520755 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.78□□□□□ -0.84
LSM1-203ENST00000520755 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 PANO1I0J062 215 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 SMIM13P0DJ93 91 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 PFN2P35080 140 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 BOD1L2Q8IYS8 172 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 C14orf144Q96I85 54 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 LITAFQ99732 161 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 PKIGQ9Y2B9 76 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 HSPG2P98160 4391 aa9.77□□□□□ -0.85
LSM1-203ENST00000520755 RPL18AQ02543 176 aaKnown RBP9.76□□□□□ -0.85
LSM1-203ENST00000520755 MEIG1Q5JSS6 88 aa9.76□□□□□ -0.85
LSM1-203ENST00000520755 DPH3Q96FX2 82 aa9.76□□□□□ -0.85
LSM1-203ENST00000520755 A0A0U1RRA0 63 aa9.75□□□□□ -0.85
LSM1-203ENST00000520755 PTTG1IPP53801 180 aa9.75□□□□□ -0.85
LSM1-203ENST00000520755 GAGE2BQ13066 116 aa9.75□□□□□ -0.85
LSM1-203ENST00000520755 SCXQ7RTU7 201 aa9.75□□□□□ -0.85
LSM1-203ENST00000520755 DLEU1O43261 78 aa9.74□□□□□ -0.85
LSM1-203ENST00000520755 S100A12P80511 92 aa9.74□□□□□ -0.85
LSM1-203ENST00000520755 COX17Q14061 63 aa9.74□□□□□ -0.85
LSM1-203ENST00000520755 ADAMTSL4-AS1Q5T5F5 129 aa9.74□□□□□ -0.85
LSM1-203ENST00000520755 DAND5Q8N907 189 aa9.74□□□□□ -0.85
LSM1-203ENST00000520755 C12orf57Q99622 126 aa9.74□□□□□ -0.85
LSM1-203ENST00000520755 CIRBPQ14011 172 aaKnown RBP9.73□□□□□ -0.85
LSM1-203ENST00000520755 GAGE2EQ4V326 116 aa9.73□□□□□ -0.85
LSM1-203ENST00000520755 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
LSM1-203ENST00000520755 MIR7-3HGQ8N6C7 128 aa9.73□□□□□ -0.85
LSM1-203ENST00000520755 CIRBP-AS1Q8TBR5 109 aa9.73□□□□□ -0.85
LSM1-203ENST00000520755 SPACA4Q8TDM5 124 aa9.73□□□□□ -0.85
LSM1-203ENST00000520755 GAGE2DQ9UEU5 116 aa9.73□□□□□ -0.85
LSM1-203ENST00000520755 TIMM17BO60830 172 aa9.72□□□□□ -0.85
LSM1-203ENST00000520755 LINC00158P58513 81 aa9.72□□□□□ -0.85
LSM1-203ENST00000520755 SCGB1D4Q6XE38 83 aa9.72□□□□□ -0.85
LSM1-203ENST00000520755 C2orf91Q6ZV80 131 aa9.72□□□□□ -0.85
LSM1-203ENST00000520755 LINC00518Q8N0U6 118 aa9.72□□□□□ -0.85
LSM1-203ENST00000520755 XAGE1AQ9HD64 81 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms