RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 C3orf84H3BNL1 204 aa6.14□□□□□ -1.43
CTNNA1-223ENST00000520520 ODF3L2Q3SX64 289 aa6.14□□□□□ -1.43
CTNNA1-223ENST00000520520 CASC10Q5T4H9 136 aa6.14□□□□□ -1.43
CTNNA1-223ENST00000520520 C9orf66Q5T8R8 295 aa6.14□□□□□ -1.43
CTNNA1-223ENST00000520520 MUC7Q8TAX7 377 aa6.14□□□□□ -1.43
CTNNA1-223ENST00000520520 CLEC2BQ92478 149 aa6.14□□□□□ -1.43
CTNNA1-223ENST00000520520 FAM110AQ9BQ89 295 aa6.14□□□□□ -1.43
CTNNA1-223ENST00000520520 IMUPQ9GZP8 106 aa6.14□□□□□ -1.43
CTNNA1-223ENST00000520520 XCL2Q9UBD3 114 aa6.14□□□□□ -1.43
CTNNA1-223ENST00000520520 GAGE12JA6NER3 117 aa6.13□□□□□ -1.43
CTNNA1-223ENST00000520520 GAGE7O76087 117 aa6.13□□□□□ -1.43
CTNNA1-223ENST00000520520 GAGE12FP0CL80 117 aa6.13□□□□□ -1.43
CTNNA1-223ENST00000520520 GAGE12GP0CL81 117 aa6.13□□□□□ -1.43
CTNNA1-223ENST00000520520 GAGE12IP0CL82 117 aa6.13□□□□□ -1.43
CTNNA1-223ENST00000520520 GAGE4Q13068 117 aa6.13□□□□□ -1.43
CTNNA1-223ENST00000520520 HUWE1Q7Z6Z7 4374 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-223ENST00000520520 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
CTNNA1-223ENST00000520520 TRBV7-7A0A0K0K1E9 115 aa6.12□□□□□ -1.43
CTNNA1-223ENST00000520520 TRBV6-4A0A1B0GX49 114 aa6.12□□□□□ -1.43
CTNNA1-223ENST00000520520 ATP5G1P05496 136 aa6.12□□□□□ -1.43
CTNNA1-223ENST00000520520 C1orf158Q8N1D5 194 aa6.12□□□□□ -1.43
CTNNA1-223ENST00000520520 DAND5Q8N907 189 aa6.12□□□□□ -1.43
CTNNA1-223ENST00000520520 ZNF625Q96I27 306 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-223ENST00000520520 CDC42SE2Q9NRR3 84 aa6.12□□□□□ -1.43
CTNNA1-223ENST00000520520 STARD9Q9P2P6 4700 aa6.12□□□□□ -1.43
CTNNA1-223ENST00000520520 TENM2Q9NT68 2774 aa6.11□□□□□ -1.43
CTNNA1-223ENST00000520520 TRGV2A0A075B6R0 118 aa6.11□□□□□ -1.43
CTNNA1-223ENST00000520520 DNAL4O96015 105 aa6.11□□□□□ -1.43
CTNNA1-223ENST00000520520 COX7B2Q8TF08 81 aa6.11□□□□□ -1.43
CTNNA1-223ENST00000520520 DYNC2H1Q8NCM8 4307 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 DNAH7Q8WXX0 4024 aa6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 HYDINQ4G0P3 5121 aa6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 TRGV4A0A0C4DH28 118 aa6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 A8MZ25 164 aa6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 F5H768 121 aa6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 H0YGX0 51 aa6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 RPL28P46779 137 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 COX6A2Q02221 97 aa6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 LYSTQ99698 3801 aa6.1□□□□□ -1.43
CTNNA1-223ENST00000520520 CSMD3Q7Z407 3707 aa6.09□□□□□ -1.43
CTNNA1-223ENST00000520520 IBA57-AS1B1ANH7 110 aa6.09□□□□□ -1.43
CTNNA1-223ENST00000520520 Q6ZTI0 123 aa6.09□□□□□ -1.43
CTNNA1-223ENST00000520520 NACAE9PAV3 2078 aa6.09□□□□□ -1.43
CTNNA1-223ENST00000520520 LINC00694P0DN24 101 aa6.08□□□□□ -1.44
CTNNA1-223ENST00000520520 CXCL5P42830 114 aa6.08□□□□□ -1.44
CTNNA1-223ENST00000520520 SND1-IT1Q9HBX3 110 aa6.08□□□□□ -1.44
CTNNA1-223ENST00000520520 NOP10Q9NPE3 64 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-223ENST00000520520 LCE6AA0A183 80 aa6.07□□□□□ -1.44
CTNNA1-223ENST00000520520 PRM2P04554 102 aa6.07□□□□□ -1.44
CTNNA1-223ENST00000520520 BAALC-AS2P0C853 105 aa6.07□□□□□ -1.44
CTNNA1-223ENST00000520520 NTM-AS1Q6ZSK4 140 aa6.07□□□□□ -1.44
CTNNA1-223ENST00000520520 LINC01561Q8N1V8 128 aa6.07□□□□□ -1.44
CTNNA1-223ENST00000520520 Q9UF83 564 aa6.07□□□□□ -1.44
CTNNA1-223ENST00000520520 A0A0U1RRA0 63 aa6.06□□□□□ -1.44
CTNNA1-223ENST00000520520 H3BS24 57 aa6.06□□□□□ -1.44
CTNNA1-223ENST00000520520 MALP21145 153 aa6.06□□□□□ -1.44
CTNNA1-223ENST00000520520 LINC00158P58513 81 aa6.06□□□□□ -1.44
CTNNA1-223ENST00000520520 SOSTDC1Q6X4U4 206 aa6.06□□□□□ -1.44
CTNNA1-223ENST00000520520 MIR7-3HGQ8N6C7 128 aa6.06□□□□□ -1.44
CTNNA1-223ENST00000520520 CHCHD5Q9BSY4 110 aa6.06□□□□□ -1.44
CTNNA1-223ENST00000520520 TMEM126AQ9H061 195 aa6.06□□□□□ -1.44
CTNNA1-223ENST00000520520 A0A087WZ39 114 aa6.05□□□□□ -1.44
CTNNA1-223ENST00000520520 TRBV6-8A0A0A6YYG3 113 aa6.05□□□□□ -1.44
CTNNA1-223ENST00000520520 B5MCH6 92 aa6.05□□□□□ -1.44
CTNNA1-223ENST00000520520 Q8N3U1 123 aa6.05□□□□□ -1.44
CTNNA1-223ENST00000520520 TOMM7Q9P0U1 55 aa6.05□□□□□ -1.44
CTNNA1-223ENST00000520520 STAB2Q8WWQ8 2551 aa6.05□□□□□ -1.44
CTNNA1-223ENST00000520520 A0A1B0GX51 115 aa6.04□□□□□ -1.44
CTNNA1-223ENST00000520520 IGLV1-51P01701 117 aa6.04□□□□□ -1.44
CTNNA1-223ENST00000520520 SS18Q15532 418 aa6.04□□□□□ -1.44
CTNNA1-223ENST00000520520 S100A7L2Q5SY68 101 aa6.04□□□□□ -1.44
CTNNA1-223ENST00000520520 FAM236AA0A1B0GUQ0 79 aa6.03□□□□□ -1.44
CTNNA1-223ENST00000520520 FAM236BA0A1B0GV22 79 aa6.03□□□□□ -1.44
CTNNA1-223ENST00000520520 IGHV4-30-4P0DP06 118 aa6.03□□□□□ -1.44
CTNNA1-223ENST00000520520 RPL35AP18077 110 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-223ENST00000520520 SDIM1Q6ZPB5 146 aa6.03□□□□□ -1.44
CTNNA1-223ENST00000520520 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
CTNNA1-223ENST00000520520 KIR2DL5BQ8NHK3 375 aa6.03□□□□□ -1.44
CTNNA1-223ENST00000520520 SS18L2Q9UHA2 77 aa6.03□□□□□ -1.44
CTNNA1-223ENST00000520520 PLECQ15149 4684 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-223ENST00000520520 PLAC8L1A1L4L8 177 aa6.02□□□□□ -1.45
CTNNA1-223ENST00000520520 SMIM9A6NGZ8 99 aa6.02□□□□□ -1.45
CTNNA1-223ENST00000520520 ATOX1O00244 68 aa6.02□□□□□ -1.45
CTNNA1-223ENST00000520520 PAX4O43316 350 aa6.02□□□□□ -1.45
CTNNA1-223ENST00000520520 GAGE2AQ6NT46 116 aa6.02□□□□□ -1.45
CTNNA1-223ENST00000520520 Q8IZM0 81 aa6.02□□□□□ -1.45
CTNNA1-223ENST00000520520 RETNQ9HD89 108 aa6.02□□□□□ -1.45
CTNNA1-223ENST00000520520 DNAH1Q9P2D7 4330 aa6.02□□□□□ -1.45
CTNNA1-223ENST00000520520 IGHV3OR16-9A0A0B4J2B5 98 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 CCDC179H3BU77 68 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 CCL18P55774 89 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 FHL2Q14192 279 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 C6orf226Q5I0X4 101 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 CFAP161Q6P656 301 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 LINC00337Q8N6G1 96 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 SMIM11BQ8TCY0 68 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 TM2D3Q9BRN9 247 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 ORMDL1Q9P0S3 153 aa6.01□□□□□ -1.45
CTNNA1-223ENST00000520520 SORL1Q92673 2214 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms