RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 PRSS2P07478 247 aa3.65□□□□□ -1.83
SCARNA20.4-201ENST00000516969 VAMP3Q15836 100 aa3.65□□□□□ -1.83
SCARNA20.4-201ENST00000516969 C6orf226Q5I0X4 101 aa3.65□□□□□ -1.83
SCARNA20.4-201ENST00000516969 LINC00308Q8TCZ7 52 aa3.65□□□□□ -1.83
SCARNA20.4-201ENST00000516969 TOMM7Q9P0U1 55 aa3.65□□□□□ -1.83
SCARNA20.4-201ENST00000516969 LINC00588Q9Y4M8 146 aa3.65□□□□□ -1.83
SCARNA20.4-201ENST00000516969 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 APOMO95445 188 aa3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 CXCL5P42830 114 aa3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 SOSTDC1Q6X4U4 206 aa3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 DAND5Q8N907 189 aa3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 COPS9Q8WXC6 57 aa3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 UBE2WQ96B02 151 aa3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 NAA38Q9BRA0 125 aaKnown RBP3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 UPK3BQ9BT76 320 aa3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 PRO1854Q9UHT4 67 aa3.64□□□□□ -1.83
SCARNA20.4-201ENST00000516969 CSMD3Q7Z407 3707 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 LOC107984156A0A0G2JMH3 177 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 GAGE10A6NGK3 116 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 K7EP34 96 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 TSPAN13O95857 204 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 CRPP02741 224 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 FABP2P12104 132 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 MALP21145 153 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 CCL18P55774 89 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 MEIG1Q5JSS6 88 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 C2orf82Q6UX34 121 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 ARL17AQ8IVW1 177 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 PGPEP1Q9NXJ5 209 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 APLNQ9ULZ1 77 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 TENM2Q9NT68 2774 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 DNAH1Q9P2D7 4330 aa3.63□□□□□ -1.83
SCARNA20.4-201ENST00000516969 GVQW2A0A096LPI5 108 aaPredicted RBP3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 A0A0U1RRA0 63 aa3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 LINC00158P58513 81 aa3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 CKS1BP61024 79 aa3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 NPC2P61916 151 aa3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 COX17Q14061 63 aa3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 GTF2H5Q6ZYL4 71 aa3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 MIR7-3HGQ8N6C7 128 aa3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 NTN5Q8WTR8 489 aaPredicted RBP3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 ERG28Q9UKR5 140 aa3.62□□□□□ -1.83
SCARNA20.4-201ENST00000516969 DNHD1Q96M86 4753 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 TRBV30A0A0K0K1B3 111 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 PFN2P35080 140 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 SPAG11BQ08648 103 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 C10orf25Q5T742 122 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 CFAP161Q6P656 301 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 UNQ6190/PRO20217Q6UXQ8 127 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 C6orf223Q8N319 242 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 MUC7Q8TAX7 377 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 SPCS1Q9Y6A9 102 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 MEGF8Q7Z7M0 2845 aa3.61□□□□□ -1.83
SCARNA20.4-201ENST00000516969 IGKV2-28A0A075B6P5 120 aa3.6□□□□□ -1.83
SCARNA20.4-201ENST00000516969 F8WDY8 70 aa3.6□□□□□ -1.83
SCARNA20.4-201ENST00000516969 IGKV2D-28P01615 120 aa3.6□□□□□ -1.83
SCARNA20.4-201ENST00000516969 C15orf56Q8N910 161 aa3.6□□□□□ -1.83
SCARNA20.4-201ENST00000516969 LYSTQ99698 3801 aa3.6□□□□□ -1.83
SCARNA20.4-201ENST00000516969 C1orf43Q9BWL3 253 aa3.6□□□□□ -1.83
SCARNA20.4-201ENST00000516969 SND1-IT1Q9HBX3 110 aa3.6□□□□□ -1.83
SCARNA20.4-201ENST00000516969 TRBV20-1A0A075B6N2 111 aa3.59□□□□□ -1.83
SCARNA20.4-201ENST00000516969 IGKV2D-24A0A075B6R9 120 aa3.59□□□□□ -1.83
SCARNA20.4-201ENST00000516969 NUPR2A6NF83 97 aa3.59□□□□□ -1.83
SCARNA20.4-201ENST00000516969 C9orf116Q5BN46 136 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.4-201ENST00000516969 LYRM7Q5U5X0 104 aa3.59□□□□□ -1.83
SCARNA20.4-201ENST00000516969 LINC00526Q96FQ7 95 aa3.59□□□□□ -1.83
SCARNA20.4-201ENST00000516969 C2orf48Q96LS8 159 aa3.59□□□□□ -1.83
SCARNA20.4-201ENST00000516969 PRO0461Q9UI25 63 aa3.59□□□□□ -1.83
SCARNA20.4-201ENST00000516969 TRAV13-2A0A0B4J235 113 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 F8W1H4 67 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 H3BMG7 143 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 H7C2G1 150 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 ZNF561-AS1K7EIQ3 104 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 TRIAP1O43715 76 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 NDUFC2O95298 119 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 TCL1BO95988 128 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 RPL13AP40429 203 aaKnown RBP3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 LINC00337Q8N6G1 96 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 RMI2Q96E14 147 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 C6orf48Q9UBA6 75 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 VPS13DQ5THJ4 4388 aa3.58□□□□□ -1.84
SCARNA20.4-201ENST00000516969 SCGB1C2P0DMR2 95 aa3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 RPL28P46779 137 aaKnown RBP3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 PSMB2P49721 201 aa3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 HIGD2BQ4VC39 106 aa3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 CASC10Q5T4H9 136 aa3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 Q6ZRU5 148 aa3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 CAMK2N2Q96S95 79 aa3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 KRTAP1-5Q9BYS1 174 aa3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 Q9HAA7 133 aa3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 FBN3Q75N90 2809 aa3.57□□□□□ -1.84
SCARNA20.4-201ENST00000516969 USP17L23D6RBM5 183 aa3.56□□□□□ -1.84
SCARNA20.4-201ENST00000516969 SLPIP03973 132 aa3.56□□□□□ -1.84
SCARNA20.4-201ENST00000516969 COX6CP09669 75 aa3.56□□□□□ -1.84
SCARNA20.4-201ENST00000516969 SMCPP49901 116 aaPredicted RBP3.56□□□□□ -1.84
SCARNA20.4-201ENST00000516969 WFDC2Q14508 124 aa3.56□□□□□ -1.84
SCARNA20.4-201ENST00000516969 Q1RN00 199 aa3.56□□□□□ -1.84
SCARNA20.4-201ENST00000516969 RNF151Q2KHN1 245 aa3.56□□□□□ -1.84
SCARNA20.4-201ENST00000516969 Q8NDZ9 215 aa3.56□□□□□ -1.84
SCARNA20.4-201ENST00000516969 LINC01600Q96MT4 127 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms