RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 TEX15Q9BXT5 2789 aa2.58□□□□□ -2
CAST-242ENST00000515063 IGHV3OR16-12A0A075B7B8 117 aa2.58□□□□□ -2
CAST-242ENST00000515063 IGHV3-73A0A0B4J1V6 119 aa2.58□□□□□ -2
CAST-242ENST00000515063 H3BT86 120 aa2.58□□□□□ -2
CAST-242ENST00000515063 TCL1BO95988 128 aa2.58□□□□□ -2
CAST-242ENST00000515063 RPL13AP40429 203 aaKnown RBP2.58□□□□□ -2
CAST-242ENST00000515063 MIAQ16674 131 aa2.58□□□□□ -2
CAST-242ENST00000515063 SFTA2Q6UW10 78 aa2.58□□□□□ -2
CAST-242ENST00000515063 Q6ZUT4 128 aa2.58□□□□□ -2
CAST-242ENST00000515063 MTURNQ8N3F0 131 aa2.58□□□□□ -2
CAST-242ENST00000515063 KIR2DL5BQ8NHK3 375 aa2.58□□□□□ -2
CAST-242ENST00000515063 ZNF418Q8TF45 676 aaPredicted RBP2.58□□□□□ -2
CAST-242ENST00000515063 CITED1Q99966 193 aa2.58□□□□□ -2
CAST-242ENST00000515063 XCL2Q9UBD3 114 aa2.58□□□□□ -2
CAST-242ENST00000515063 NOTCH2Q04721 2471 aa2.58□□□□□ -2
CAST-242ENST00000515063 CSMD1Q96PZ7 3565 aa2.57□□□□□ -2
CAST-242ENST00000515063 USP9YO00507 2555 aaPredicted RBP2.57□□□□□ -2
CAST-242ENST00000515063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.57□□□□□ -2
CAST-242ENST00000515063 TRGV1A0A0A0MS02 117 aa2.57□□□□□ -2
CAST-242ENST00000515063 TRBV10-2A0A0K0K1G8 114 aa2.57□□□□□ -2
CAST-242ENST00000515063 IGKV2-29A2NJV5 120 aaPredicted RBP2.57□□□□□ -2
CAST-242ENST00000515063 SMIM9A6NGZ8 99 aa2.57□□□□□ -2
CAST-242ENST00000515063 SLC25A20O43772 301 aa2.57□□□□□ -2
CAST-242ENST00000515063 HTN1P15515 57 aa2.57□□□□□ -2
CAST-242ENST00000515063 SEC61GP60059 68 aa2.57□□□□□ -2
CAST-242ENST00000515063 MRPL23Q16540 153 aaKnown RBP2.57□□□□□ -2
CAST-242ENST00000515063 Q1RN00 199 aa2.57□□□□□ -2
CAST-242ENST00000515063 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CAST-242ENST00000515063 LINC00242Q5T6M2 205 aa2.57□□□□□ -2
CAST-242ENST00000515063 LINC01561Q8N1V8 128 aa2.57□□□□□ -2
CAST-242ENST00000515063 ANKRD29Q8N6D5 301 aa2.57□□□□□ -2
CAST-242ENST00000515063 LINC01006Q8NI28 216 aa2.57□□□□□ -2
CAST-242ENST00000515063 TMEM101Q96IK0 257 aa2.57□□□□□ -2
CAST-242ENST00000515063 CARD19Q96LW7 228 aa2.57□□□□□ -2
CAST-242ENST00000515063 TMEM243Q9BU79 118 aa2.57□□□□□ -2
CAST-242ENST00000515063 ESM1Q9NQ30 184 aa2.57□□□□□ -2
CAST-242ENST00000515063 CDC42SE2Q9NRR3 84 aa2.57□□□□□ -2
CAST-242ENST00000515063 UTP20O75691 2785 aaKnown RBP2.57□□□□□ -2
CAST-242ENST00000515063 TENM4Q6N022 2769 aa2.57□□□□□ -2
CAST-242ENST00000515063 POLQO75417 2590 aa2.56□□□□□ -2
CAST-242ENST00000515063 ZFHX3Q15911 3703 aa2.56□□□□□ -2
CAST-242ENST00000515063 TRAV8-3A0A0A6YYJ7 113 aa2.56□□□□□ -2
CAST-242ENST00000515063 PLAC8L1A1L4L8 177 aa2.56□□□□□ -2
CAST-242ENST00000515063 C9JAW5 83 aa2.56□□□□□ -2
CAST-242ENST00000515063 F5H768 121 aa2.56□□□□□ -2
CAST-242ENST00000515063 LST1O00453 97 aa2.56□□□□□ -2
CAST-242ENST00000515063 UBE2L6O14933 153 aa2.56□□□□□ -2
CAST-242ENST00000515063 GIG44P09565 113 aaPredicted RBP2.56□□□□□ -2
CAST-242ENST00000515063 SPINK8P0C7L1 97 aa2.56□□□□□ -2
CAST-242ENST00000515063 LINC00694P0DN24 101 aa2.56□□□□□ -2
CAST-242ENST00000515063 INSL3P51460 131 aa2.56□□□□□ -2
CAST-242ENST00000515063 C6orf226Q5I0X4 101 aa2.56□□□□□ -2
CAST-242ENST00000515063 DEFB121Q5J5C9 76 aa2.56□□□□□ -2
CAST-242ENST00000515063 FAM222AQ5U5X8 452 aa2.56□□□□□ -2
CAST-242ENST00000515063 CEMP1Q6PRD7 247 aaPredicted RBP2.56□□□□□ -2
CAST-242ENST00000515063 Q6Q795 121 aa2.56□□□□□ -2
CAST-242ENST00000515063 NTM-AS1Q6ZSK4 140 aa2.56□□□□□ -2
CAST-242ENST00000515063 Q6ZTI0 123 aa2.56□□□□□ -2
CAST-242ENST00000515063 WFDC11Q8NEX6 87 aa2.56□□□□□ -2
CAST-242ENST00000515063 TYMSOSQ8TAI1 123 aa2.56□□□□□ -2
CAST-242ENST00000515063 LINC00308Q8TCZ7 52 aa2.56□□□□□ -2
CAST-242ENST00000515063 ZNF625Q96I27 306 aaPredicted RBP2.56□□□□□ -2
CAST-242ENST00000515063 CDKN2A-AS1Q9UH64 79 aa2.56□□□□□ -2
CAST-242ENST00000515063 ICOSQ9Y6W8 199 aa2.56□□□□□ -2
CAST-242ENST00000515063 IGHV3-64A0A075B6Q5 118 aa2.55□□□□□ -2
CAST-242ENST00000515063 A0A1B0GV72 72 aa2.55□□□□□ -2
CAST-242ENST00000515063 FAM240AA0A1B0GVK7 77 aa2.55□□□□□ -2
CAST-242ENST00000515063 TRACP01848 142 aa2.55□□□□□ -2
CAST-242ENST00000515063 PRM2P04554 102 aa2.55□□□□□ -2
CAST-242ENST00000515063 ACYP1P07311 99 aa2.55□□□□□ -2
CAST-242ENST00000515063 COX6A2Q02221 97 aa2.55□□□□□ -2
CAST-242ENST00000515063 KRTAP13-3Q3SY46 172 aa2.55□□□□□ -2
CAST-242ENST00000515063 VPS13CQ709C8 3753 aa2.55□□□□□ -2
CAST-242ENST00000515063 DEFB104AQ8WTQ1 72 aa2.55□□□□□ -2
CAST-242ENST00000515063 NOP10Q9NPE3 64 aaKnown RBP2.55□□□□□ -2
CAST-242ENST00000515063 CELSR1Q9NYQ6 3014 aa2.55□□□□□ -2
CAST-242ENST00000515063 Q9UF83 564 aa2.55□□□□□ -2
CAST-242ENST00000515063 MXRA5Q9NR99 2828 aa2.55□□□□□ -2
CAST-242ENST00000515063 LRRK2Q5S007 2527 aa2.54□□□□□ -2
CAST-242ENST00000515063 SVEP1Q4LDE5 3571 aa2.54□□□□□ -2
CAST-242ENST00000515063 FBN2P35556 2912 aa2.54□□□□□ -2
CAST-242ENST00000515063 TRGV2A0A075B6R0 118 aa2.54□□□□□ -2
CAST-242ENST00000515063 TRBV6-8A0A0A6YYG3 113 aa2.54□□□□□ -2
CAST-242ENST00000515063 TRAV13-2A0A0B4J235 113 aa2.54□□□□□ -2
CAST-242ENST00000515063 TRGV4A0A0C4DH28 118 aa2.54□□□□□ -2
CAST-242ENST00000515063 LYRM9A8MSI8 78 aa2.54□□□□□ -2
CAST-242ENST00000515063 IBA57-AS1B1ANH7 110 aa2.54□□□□□ -2
CAST-242ENST00000515063 COX7A2LO14548 114 aa2.54□□□□□ -2
CAST-242ENST00000515063 KRTAP5-9P26371 169 aa2.54□□□□□ -2
CAST-242ENST00000515063 RNASE13Q5GAN3 156 aaKnown RBP2.54□□□□□ -2
CAST-242ENST00000515063 MEIG1Q5JSS6 88 aa2.54□□□□□ -2
CAST-242ENST00000515063 MUC7Q8TAX7 377 aa2.54□□□□□ -2
CAST-242ENST00000515063 COX7B2Q8TF08 81 aa2.54□□□□□ -2
CAST-242ENST00000515063 UBE2WQ96B02 151 aa2.54□□□□□ -2
CAST-242ENST00000515063 CELSR2Q9HCU4 2923 aa2.54□□□□□ -2
CAST-242ENST00000515063 COL12A1Q99715 3063 aa2.53□□□□□ -2
CAST-242ENST00000515063 AKAP9Q99996 3911 aa2.53□□□□□ -2
CAST-242ENST00000515063 TRAV13-1A0A0B4J241 112 aa2.53□□□□□ -2
CAST-242ENST00000515063 TRAV8-4A0A0B4J246 113 aa2.53□□□□□ -2
CAST-242ENST00000515063 IGHV3OR16-9A0A0B4J2B5 98 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms