RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CFC1BP0CG36 223 aa8.61□□□□□ -1.03
PVT1-203ENST00000513868 CFC1P0CG37 223 aa8.61□□□□□ -1.03
PVT1-203ENST00000513868 CIRBPQ14011 172 aaKnown RBP8.61□□□□□ -1.03
PVT1-203ENST00000513868 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
PVT1-203ENST00000513868 A0A0U1RRA0 63 aa8.6□□□□□ -1.03
PVT1-203ENST00000513868 MALP21145 153 aa8.6□□□□□ -1.03
PVT1-203ENST00000513868 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
PVT1-203ENST00000513868 KLK5Q9Y337 293 aaPredicted RBP8.6□□□□□ -1.03
PVT1-203ENST00000513868 DNAH1Q9P2D7 4330 aa8.59□□□□□ -1.03
PVT1-203ENST00000513868 RPL24P83731 157 aaKnown RBP8.59□□□□□ -1.03
PVT1-203ENST00000513868 MEIG1Q5JSS6 88 aa8.59□□□□□ -1.03
PVT1-203ENST00000513868 NAA38Q9BRA0 125 aaKnown RBP8.59□□□□□ -1.03
PVT1-203ENST00000513868 H3BUT2 72 aa8.59□□□□□ -1.03
PVT1-203ENST00000513868 IFITM1P13164 125 aa8.59□□□□□ -1.03
PVT1-203ENST00000513868 NPC2P61916 151 aa8.59□□□□□ -1.03
PVT1-203ENST00000513868 SFTA2Q6UW10 78 aa8.59□□□□□ -1.03
PVT1-203ENST00000513868 SOSTDC1Q6X4U4 206 aa8.59□□□□□ -1.03
PVT1-203ENST00000513868 LYSTQ99698 3801 aa8.59□□□□□ -1.03
PVT1-203ENST00000513868 APOMO95445 188 aa8.58□□□□□ -1.04
PVT1-203ENST00000513868 LINC00308Q8TCZ7 52 aa8.58□□□□□ -1.04
PVT1-203ENST00000513868 FBN3Q75N90 2809 aa8.57□□□□□ -1.04
PVT1-203ENST00000513868 IBA57-AS1B1ANH7 110 aa8.57□□□□□ -1.04
PVT1-203ENST00000513868 C6orf223Q8N319 242 aa8.56□□□□□ -1.04
PVT1-203ENST00000513868 A0A0B4J2C4 111 aa8.56□□□□□ -1.04
PVT1-203ENST00000513868 CXCL5P42830 114 aa8.56□□□□□ -1.04
PVT1-203ENST00000513868 CKS1BP61024 79 aa8.56□□□□□ -1.04
PVT1-203ENST00000513868 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
PVT1-203ENST00000513868 LINC00526Q96FQ7 95 aa8.56□□□□□ -1.04
PVT1-203ENST00000513868 C1orf43Q9BWL3 253 aa8.56□□□□□ -1.04
PVT1-203ENST00000513868 PPDPFQ9H3Y8 114 aa8.56□□□□□ -1.04
PVT1-203ENST00000513868 ERG28Q9UKR5 140 aa8.56□□□□□ -1.04
PVT1-203ENST00000513868 PLECQ15149 4684 aaKnown RBP8.55□□□□□ -1.04
PVT1-203ENST00000513868 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
PVT1-203ENST00000513868 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
PVT1-203ENST00000513868 SPAG11BQ08648 103 aa8.55□□□□□ -1.04
PVT1-203ENST00000513868 CFAP161Q6P656 301 aa8.55□□□□□ -1.04
PVT1-203ENST00000513868 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
PVT1-203ENST00000513868 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.54□□□□□ -1.04
PVT1-203ENST00000513868 PFN2P35080 140 aa8.54□□□□□ -1.04
PVT1-203ENST00000513868 LINC00158P58513 81 aa8.54□□□□□ -1.04
PVT1-203ENST00000513868 VAMP3Q15836 100 aa8.54□□□□□ -1.04
PVT1-203ENST00000513868 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
PVT1-203ENST00000513868 C15orf56Q8N910 161 aa8.54□□□□□ -1.04
PVT1-203ENST00000513868 PGPEP1Q9NXJ5 209 aa8.54□□□□□ -1.04
PVT1-203ENST00000513868 PRO1854Q9UHT4 67 aa8.54□□□□□ -1.04
PVT1-203ENST00000513868 TSPAN13O95857 204 aa8.53□□□□□ -1.04
PVT1-203ENST00000513868 UNQ6190/PRO20217Q6UXQ8 127 aa8.53□□□□□ -1.04
PVT1-203ENST00000513868 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
PVT1-203ENST00000513868 Q9HAA7 133 aa8.53□□□□□ -1.04
PVT1-203ENST00000513868 STARD9Q9P2P6 4700 aa8.52□□□□□ -1.05
PVT1-203ENST00000513868 UBE2V1Q13404 147 aa8.52□□□□□ -1.05
PVT1-203ENST00000513868 C9orf116Q5BN46 136 aaPredicted RBP8.52□□□□□ -1.05
PVT1-203ENST00000513868 KRTAP1-5Q9BYS1 174 aa8.52□□□□□ -1.05
PVT1-203ENST00000513868 TGP01266 2768 aa8.51□□□□□ -1.05
PVT1-203ENST00000513868 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
PVT1-203ENST00000513868 COX17Q14061 63 aa8.5□□□□□ -1.05
PVT1-203ENST00000513868 HIGD2BQ4VC39 106 aa8.5□□□□□ -1.05
PVT1-203ENST00000513868 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
PVT1-203ENST00000513868 FABP2P12104 132 aa8.49□□□□□ -1.05
PVT1-203ENST00000513868 CASC10Q5T4H9 136 aa8.49□□□□□ -1.05
PVT1-203ENST00000513868 VPS13DQ5THJ4 4388 aa8.49□□□□□ -1.05
PVT1-203ENST00000513868 LOC107984156A0A0G2JMH3 177 aa8.49□□□□□ -1.05
PVT1-203ENST00000513868 ARL17AQ8IVW1 177 aa8.49□□□□□ -1.05
PVT1-203ENST00000513868 UBE2DNLQ8IWF7 75 aa8.49□□□□□ -1.05
PVT1-203ENST00000513868 C6orf48Q9UBA6 75 aa8.49□□□□□ -1.05
PVT1-203ENST00000513868 ZNF561-AS1K7EIQ3 104 aa8.48□□□□□ -1.05
PVT1-203ENST00000513868 K7EP34 96 aa8.48□□□□□ -1.05
PVT1-203ENST00000513868 SPCS1Q9Y6A9 102 aa8.48□□□□□ -1.05
PVT1-203ENST00000513868 GAGE10A6NGK3 116 aa8.47□□□□□ -1.05
PVT1-203ENST00000513868 C2orf48Q96LS8 159 aa8.47□□□□□ -1.05
PVT1-203ENST00000513868 SND1-IT1Q9HBX3 110 aa8.47□□□□□ -1.05
PVT1-203ENST00000513868 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.05
PVT1-203ENST00000513868 H7C2G1 150 aa8.46□□□□□ -1.05
PVT1-203ENST00000513868 IGKV2D-28P01615 120 aa8.46□□□□□ -1.05
PVT1-203ENST00000513868 Q6ZRU5 148 aa8.46□□□□□ -1.06
PVT1-203ENST00000513868 RMI2Q96E14 147 aa8.46□□□□□ -1.06
PVT1-203ENST00000513868 CAMK2N2Q96S95 79 aa8.46□□□□□ -1.06
PVT1-203ENST00000513868 DNAH10Q8IVF4 4471 aa8.45□□□□□ -1.06
PVT1-203ENST00000513868 TRBV30A0A0K0K1B3 111 aa8.45□□□□□ -1.06
PVT1-203ENST00000513868 RPL13AP40429 203 aaKnown RBP8.45□□□□□ -1.06
PVT1-203ENST00000513868 GTF2H5Q6ZYL4 71 aa8.45□□□□□ -1.06
PVT1-203ENST00000513868 USP17L23D6RBM5 183 aa8.43□□□□□ -1.06
PVT1-203ENST00000513868 F8WDY8 70 aa8.43□□□□□ -1.06
PVT1-203ENST00000513868 LINC00337Q8N6G1 96 aa8.43□□□□□ -1.06
PVT1-203ENST00000513868 MUC7Q8TAX7 377 aa8.43□□□□□ -1.06
PVT1-203ENST00000513868 TRIAP1O43715 76 aa8.43□□□□□ -1.06
PVT1-203ENST00000513868 SLPIP03973 132 aa8.43□□□□□ -1.06
PVT1-203ENST00000513868 Q8NDZ9 215 aa8.43□□□□□ -1.06
PVT1-203ENST00000513868 Q1RN00 199 aa8.42□□□□□ -1.06
PVT1-203ENST00000513868 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
PVT1-203ENST00000513868 PSMB2P49721 201 aa8.41□□□□□ -1.06
PVT1-203ENST00000513868 SYCNQ0VAF6 134 aa8.41□□□□□ -1.06
PVT1-203ENST00000513868 TRAV13-2A0A0B4J235 113 aa8.4□□□□□ -1.06
PVT1-203ENST00000513868 NBDYA0A0U1RRE5 68 aa8.4□□□□□ -1.06
PVT1-203ENST00000513868 H3BMG7 143 aa8.4□□□□□ -1.06
PVT1-203ENST00000513868 NDUFC2O95298 119 aa8.4□□□□□ -1.06
PVT1-203ENST00000513868 TCL1BO95988 128 aa8.4□□□□□ -1.06
PVT1-203ENST00000513868 PRR3P79522 188 aaKnown RBP8.4□□□□□ -1.06
PVT1-203ENST00000513868 LECT2O14960 151 aa8.4□□□□□ -1.07
PVT1-203ENST00000513868 WFDC2Q14508 124 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms