RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 TAGLN2P37802 199 aaKnown RBP3.35□□□□□ -1.87
GYPB-208ENST00000507009 UBE2AP49459 152 aa3.35□□□□□ -1.87
GYPB-208ENST00000507009 LINC01547P58512 204 aaPredicted RBP3.35□□□□□ -1.87
GYPB-208ENST00000507009 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
GYPB-208ENST00000507009 ZC2HC1BQ5TFG8 222 aa3.35□□□□□ -1.87
GYPB-208ENST00000507009 FAM104AQ969W3 186 aa3.35□□□□□ -1.87
GYPB-208ENST00000507009 SMIM7Q9BQ49 75 aa3.35□□□□□ -1.87
GYPB-208ENST00000507009 MUC17Q685J3 4493 aa3.34□□□□□ -1.87
GYPB-208ENST00000507009 IGKV2D-26A0A0A0MRZ7 120 aa3.34□□□□□ -1.87
GYPB-208ENST00000507009 TMEM250H0YL14 139 aa3.34□□□□□ -1.87
GYPB-208ENST00000507009 IFI27P40305 119 aaPredicted RBP3.34□□□□□ -1.87
GYPB-208ENST00000507009 C6orf226Q5I0X4 101 aa3.34□□□□□ -1.87
GYPB-208ENST00000507009 FAM104BQ5XKR9 115 aa3.34□□□□□ -1.87
GYPB-208ENST00000507009 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
GYPB-208ENST00000507009 LINC01551Q86U37 167 aa3.34□□□□□ -1.87
GYPB-208ENST00000507009 SMIM2Q9BVW6 85 aa3.34□□□□□ -1.87
GYPB-208ENST00000507009 EIF5A2Q9GZV4 153 aaKnown RBP3.34□□□□□ -1.87
GYPB-208ENST00000507009 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.87
GYPB-208ENST00000507009 IGLV4-3A0A075B6K6 122 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 D6R8Y8 96 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 NPYP01303 97 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 RAB5AP20339 215 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 MRPS36P82909 103 aaKnown RBP3.33□□□□□ -1.88
GYPB-208ENST00000507009 TPRXLQ17RH7 258 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 MRPL54Q6P161 138 aaKnown RBP3.33□□□□□ -1.88
GYPB-208ENST00000507009 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 C20orf78Q9BR46 151 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 C2orf88Q9BSF0 95 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 ALKBH7Q9BT30 221 aaPredicted RBP3.33□□□□□ -1.88
GYPB-208ENST00000507009 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 OSTCQ9NRP0 149 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 NAT8BQ9UHF3 227 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 V9GYV3 84 aa3.33□□□□□ -1.88
GYPB-208ENST00000507009 IGKV2-28A0A075B6P5 120 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 LOC389332A0A1B0GUA5 103 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 LINC00862A6NCI5 91 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 SCGB1D1O95968 90 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 IGKV2D-28P01615 120 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 RAB5BP61020 215 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 RPL32P62910 135 aaKnown RBP3.32□□□□□ -1.88
GYPB-208ENST00000507009 BLOC1S1P78537 153 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 ADIRFQ15847 76 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 ALKAL2Q6UX46 152 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 Q6ZN92 141 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 TEX43Q6ZNM6 134 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 SLC51BQ86UW2 128 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 LINC00337Q8N6G1 96 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 TMEM141Q96I45 108 aa3.32□□□□□ -1.88
GYPB-208ENST00000507009 PRSS47A8MTI9 375 aa3.31□□□□□ -1.88
GYPB-208ENST00000507009 SCO1O75880 301 aa3.31□□□□□ -1.88
GYPB-208ENST00000507009 PRLHP81277 87 aa3.31□□□□□ -1.88
GYPB-208ENST00000507009 FAM74A3Q4VXF1 159 aa3.31□□□□□ -1.88
GYPB-208ENST00000507009 C3orf22Q8N5N4 141 aa3.31□□□□□ -1.88
GYPB-208ENST00000507009 NKAPP1Q8N9T2 125 aa3.31□□□□□ -1.88
GYPB-208ENST00000507009 TRBV24-1A0A075B6N3 115 aa3.3□□□□□ -1.88
GYPB-208ENST00000507009 F8VRH5 84 aa3.3□□□□□ -1.88
GYPB-208ENST00000507009 F8W036 122 aa3.3□□□□□ -1.88
GYPB-208ENST00000507009 PCP4P48539 62 aa3.3□□□□□ -1.88
GYPB-208ENST00000507009 PNRC1Q12796 327 aaPredicted RBP3.3□□□□□ -1.88
GYPB-208ENST00000507009 FAM19A1Q7Z5A9 133 aa3.3□□□□□ -1.88
GYPB-208ENST00000507009 Q8IZM0 81 aa3.3□□□□□ -1.88
GYPB-208ENST00000507009 PRELID3AQ96N28 172 aa3.3□□□□□ -1.88
GYPB-208ENST00000507009 VCX2Q9H322 139 aa3.3□□□□□ -1.88
GYPB-208ENST00000507009 TP73-AS1Q9UF72 201 aa3.3□□□□□ -1.88
GYPB-208ENST00000507009 SMIM27A0A1W2PRY6 76 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 SRP19P09132 144 aaKnown RBP3.29□□□□□ -1.88
GYPB-208ENST00000507009 RPL23P62829 140 aaKnown RBP3.29□□□□□ -1.88
GYPB-208ENST00000507009 FAM229BQ4G0N7 80 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 C2orf66Q6UXQ4 117 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 TMEM136Q6ZRR5 245 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 ORMDL3Q8N138 153 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 LINC01561Q8N1V8 128 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 KRTAP4-1Q9BYQ7 146 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 GEMIN7Q9H840 131 aaKnown RBP3.29□□□□□ -1.88
GYPB-208ENST00000507009 CDKN2A-AS1Q9UH64 79 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 CYSLTR1Q9Y271 337 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 PYGO1Q9Y3Y4 419 aa3.29□□□□□ -1.88
GYPB-208ENST00000507009 A0A1B0GW15 77 aa3.28□□□□□ -1.88
GYPB-208ENST00000507009 TMEM238C9JI98 176 aa3.28□□□□□ -1.88
GYPB-208ENST00000507009 PPBPP02775 128 aa3.28□□□□□ -1.88
GYPB-208ENST00000507009 S100A8P05109 93 aa3.28□□□□□ -1.88
GYPB-208ENST00000507009 HIGD2AQ9BW72 106 aa3.28□□□□□ -1.88
GYPB-208ENST00000507009 MAP1LC3AQ9H492 121 aa3.28□□□□□ -1.88
GYPB-208ENST00000507009 PFN2P35080 140 aa3.27□□□□□ -1.89
GYPB-208ENST00000507009 HERVK_113P63121 156 aa3.27□□□□□ -1.89
GYPB-208ENST00000507009 KRTAP13-1Q8IUC0 172 aa3.27□□□□□ -1.89
GYPB-208ENST00000507009 CBLN2Q8IUK8 224 aa3.27□□□□□ -1.89
GYPB-208ENST00000507009 DAND5Q8N907 189 aa3.27□□□□□ -1.89
GYPB-208ENST00000507009 COX7B2Q8TF08 81 aa3.27□□□□□ -1.89
GYPB-208ENST00000507009 AMELXQ99217 191 aa3.27□□□□□ -1.89
GYPB-208ENST00000507009 A0A1B0GXF2 115 aa3.26□□□□□ -1.89
GYPB-208ENST00000507009 SMIM1B2RUZ4 78 aa3.26□□□□□ -1.89
GYPB-208ENST00000507009 SPINK8P0C7L1 97 aa3.26□□□□□ -1.89
GYPB-208ENST00000507009 CXCL5P42830 114 aa3.26□□□□□ -1.89
GYPB-208ENST00000507009 SEC61BP60468 96 aaKnown RBP3.26□□□□□ -1.89
GYPB-208ENST00000507009 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
GYPB-208ENST00000507009 ASB16-AS1Q495Z4 193 aa3.26□□□□□ -1.89
GYPB-208ENST00000507009 TCTE3Q8IZS6 198 aa3.26□□□□□ -1.89
GYPB-208ENST00000507009 TMEM126AQ9H061 195 aa3.26□□□□□ -1.89
GYPB-208ENST00000507009 NAT8Q9UHE5 227 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms