RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 SHANK2Q9UPX8 1470 aa1.16□□□□□ -2.22
AP001960.1-201ENST00000506494 ZFHX4Q86UP3 3567 aa1.16□□□□□ -2.22
AP001960.1-201ENST00000506494 DUOX2Q9NRD8 1548 aa1.15□□□□□ -2.22
AP001960.1-201ENST00000506494 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.22
AP001960.1-201ENST00000506494 ZNF236Q9UL36 1845 aa1.15□□□□□ -2.22
AP001960.1-201ENST00000506494 SNRPFP62306 86 aaKnown RBP1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 PSMG4Q5JS54 123 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 CACFD1Q9UGQ2 172 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 SPCS1Q9Y6A9 102 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 ERCC6L2Q5T890 1561 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 PLCH1Q4KWH8 1693 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 CHD8Q9HCK8 2581 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 PCNTO95613 3336 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 TARBP1Q13395 1621 aaKnown RBP1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 CLASP1Q7Z460 1538 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 SYCP2Q9BX26 1530 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 MEGF8Q7Z7M0 2845 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 KIAA1109Q2LD37 5005 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 SYS1-DBNDD2H3BUS1 97 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 PRH1P02810 166 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 FAUP35544 74 aaKnown RBP1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 SERP2Q8N6R1 65 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 SETXQ7Z333 2677 aaKnown RBP1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 MUC2Q02817 5179 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 MYO5CQ9NQX4 1742 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 IQGAP3Q86VI3 1631 aa1.13□□□□□ -2.23
AP001960.1-201ENST00000506494 EDC4Q6P2E9 1401 aaKnown RBP1.13□□□□□ -2.23
AP001960.1-201ENST00000506494 EHBP1L1Q8N3D4 1523 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 M0R3E3 92 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 ALKAL2Q6UX46 152 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 SMIM5Q71RC9 77 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 CNFNQ9BYD5 112 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 PLXNC1O60486 1568 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 CACNA1HO95180 2353 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 RGPD1P0DJD0 1748 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 FANCD2Q9BXW9 1451 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 PIK3C2BO00750 1634 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 ABCA6Q8N139 1617 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 RNF17Q9BXT8 1623 aaKnown RBP1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 RGPD2P0DJD1 1756 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 HMGXB3Q12766 1538 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 A0A087WWC5 75 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 UMAD1C9J7I0 102 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 CFDP00746 253 aaPredicted RBP1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 IGLC2P0DOY2 106 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 IGLC3P0DOY3 106 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 ATP5EP2Q5VTU8 51 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 LINC00643Q86TS7 51 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 SMR3AQ99954 134 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 MAST1Q9Y2H9 1570 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 RALGAPBQ86X10 1494 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 CICQ96RK0 1608 aaPredicted RBP1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 ALKQ9UM73 1620 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 CROCC2H7BZ55 1655 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 ASXL3Q9C0F0 2248 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 A0A1B0GWA3 101 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 SAA2P0DJI9 122 aaPredicted RBP1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 ETDBQ3ZM63 59 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 BVES-AS1Q5T3Y7 98 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 HEPN1Q6WQI6 88 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 LINC01600Q96MT4 127 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 MYH4Q9Y623 1939 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 RAPGEF6Q8TEU7 1601 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 ANKRD17O75179 2603 aaKnown RBP1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 PTPN13Q12923 2485 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 TTC28Q96AY4 2481 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 A0A087WXM4 84 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 GNGT1P63211 74 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 TMEM263Q8WUH6 116 aaKnown RBP1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 C20orf78Q9BR46 151 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 NHSQ6T4R5 1651 aa1.09□□□□□ -2.24
AP001960.1-201ENST00000506494 NUP188Q5SRE5 1749 aa1.09□□□□□ -2.24
AP001960.1-201ENST00000506494 UBR1Q8IWV7 1749 aa1.09□□□□□ -2.24
AP001960.1-201ENST00000506494 ARHGEF5Q12774 1597 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 PAPPAQ13219 1627 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 MROH2AA6NES4 1674 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 C1orf167Q5SNV9 1468 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 TRBV25-1A0A075B6N4 114 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 H3BUT2 72 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 HMGN2P05204 90 aaKnown RBP1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 SMIM13P0DJ93 91 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 PLGLAQ15195 96 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 MYO7BQ6PIF6 2116 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 C6orf201Q7Z4U5 140 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 C18orf32Q8TCD1 76 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 PRO0255Q9UI72 69 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 PKD1L3Q7Z443 1732 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 BPTFQ12830 3046 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 APCP25054 2843 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 TEP1Q99973 2627 aaKnown RBP1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 BTAF1O14981 1849 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 LRP6O75581 1613 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 A0A0C4DFX4 3053 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 ARFGEF2Q9Y6D5 1785 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 A0A0G2JND7 137 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 FAM223BA6NKX1 122 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 H7BZZ5 65 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 HMGA1P17096 107 aaKnown RBP1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 NMSQ5H8A3 153 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms