RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 SHANK2Q9UPX8 1470 aa1.16□□□□□ -2.22
AP001960.1-201ENST00000506494 ZFHX4Q86UP3 3567 aa1.16□□□□□ -2.22
AP001960.1-201ENST00000506494 DUOX2Q9NRD8 1548 aa1.15□□□□□ -2.22
AP001960.1-201ENST00000506494 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.22
AP001960.1-201ENST00000506494 ZNF236Q9UL36 1845 aa1.15□□□□□ -2.22
AP001960.1-201ENST00000506494 SNRPFP62306 86 aaKnown RBP1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 PSMG4Q5JS54 123 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 CACFD1Q9UGQ2 172 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 SPCS1Q9Y6A9 102 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 ERCC6L2Q5T890 1561 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 PLCH1Q4KWH8 1693 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 CHD8Q9HCK8 2581 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 PCNTO95613 3336 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 TARBP1Q13395 1621 aaKnown RBP1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 CLASP1Q7Z460 1538 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 SYCP2Q9BX26 1530 aa1.15□□□□□ -2.23
AP001960.1-201ENST00000506494 MEGF8Q7Z7M0 2845 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 KIAA1109Q2LD37 5005 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 SYS1-DBNDD2H3BUS1 97 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 PRH1P02810 166 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 FAUP35544 74 aaKnown RBP1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 SERP2Q8N6R1 65 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 SETXQ7Z333 2677 aaKnown RBP1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 MUC2Q02817 5179 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 MYO5CQ9NQX4 1742 aa1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.14□□□□□ -2.23
AP001960.1-201ENST00000506494 IQGAP3Q86VI3 1631 aa1.13□□□□□ -2.23
AP001960.1-201ENST00000506494 EDC4Q6P2E9 1401 aaKnown RBP1.13□□□□□ -2.23
AP001960.1-201ENST00000506494 EHBP1L1Q8N3D4 1523 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 M0R3E3 92 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 ALKAL2Q6UX46 152 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 SMIM5Q71RC9 77 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 CNFNQ9BYD5 112 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 PLXNC1O60486 1568 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 CACNA1HO95180 2353 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 RGPD1P0DJD0 1748 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 FANCD2Q9BXW9 1451 aa1.12□□□□□ -2.23
AP001960.1-201ENST00000506494 PIK3C2BO00750 1634 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 ABCA6Q8N139 1617 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 RNF17Q9BXT8 1623 aaKnown RBP1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 RGPD2P0DJD1 1756 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 HMGXB3Q12766 1538 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 A0A087WWC5 75 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 UMAD1C9J7I0 102 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 CFDP00746 253 aaPredicted RBP1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 IGLC2P0DOY2 106 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 IGLC3P0DOY3 106 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 ATP5EP2Q5VTU8 51 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 LINC00643Q86TS7 51 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 SMR3AQ99954 134 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 MAST1Q9Y2H9 1570 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 RALGAPBQ86X10 1494 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 CICQ96RK0 1608 aaPredicted RBP1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 ALKQ9UM73 1620 aa1.11□□□□□ -2.23
AP001960.1-201ENST00000506494 CROCC2H7BZ55 1655 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 ASXL3Q9C0F0 2248 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 A0A1B0GWA3 101 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 SAA2P0DJI9 122 aaPredicted RBP1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 ETDBQ3ZM63 59 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 BVES-AS1Q5T3Y7 98 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 HEPN1Q6WQI6 88 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 LINC01600Q96MT4 127 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 MYH4Q9Y623 1939 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 RAPGEF6Q8TEU7 1601 aa1.1□□□□□ -2.23
AP001960.1-201ENST00000506494 ANKRD17O75179 2603 aaKnown RBP1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 PTPN13Q12923 2485 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 TTC28Q96AY4 2481 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 A0A087WXM4 84 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 GNGT1P63211 74 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 TMEM263Q8WUH6 116 aaKnown RBP1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 C20orf78Q9BR46 151 aa1.09□□□□□ -2.23
AP001960.1-201ENST00000506494 NHSQ6T4R5 1651 aa1.09□□□□□ -2.24
AP001960.1-201ENST00000506494 NUP188Q5SRE5 1749 aa1.09□□□□□ -2.24
AP001960.1-201ENST00000506494 UBR1Q8IWV7 1749 aa1.09□□□□□ -2.24
AP001960.1-201ENST00000506494 ARHGEF5Q12774 1597 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 PAPPAQ13219 1627 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 MROH2AA6NES4 1674 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 C1orf167Q5SNV9 1468 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 TRBV25-1A0A075B6N4 114 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 H3BUT2 72 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 HMGN2P05204 90 aaKnown RBP1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 SMIM13P0DJ93 91 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 PLGLAQ15195 96 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 MYO7BQ6PIF6 2116 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 C6orf201Q7Z4U5 140 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 C18orf32Q8TCD1 76 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 PRO0255Q9UI72 69 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 PKD1L3Q7Z443 1732 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 BPTFQ12830 3046 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 APCP25054 2843 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 TEP1Q99973 2627 aaKnown RBP1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 BTAF1O14981 1849 aa1.08□□□□□ -2.24
AP001960.1-201ENST00000506494 LRP6O75581 1613 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 A0A0C4DFX4 3053 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 ARFGEF2Q9Y6D5 1785 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 A0A0G2JND7 137 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 FAM223BA6NKX1 122 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 H7BZZ5 65 aa1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 HMGA1P17096 107 aaKnown RBP1.07□□□□□ -2.24
AP001960.1-201ENST00000506494 NMSQ5H8A3 153 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms