RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 AKAP9Q99996 3911 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 CSMD2Q7Z408 3487 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 NDUFB6O95139 128 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 IFNGP01579 166 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 UQCRHP07919 91 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 BTG2P78543 158 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 TCEAL7Q9BRU2 100 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 RERGLQ9H628 205 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 UNC13CQ8NB66 2214 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 MXRA5Q9NR99 2828 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 NBEAL2Q6ZNJ1 2754 aa1.36□□□□□ -2.19
TRAPPC13-208ENST00000505553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 TEX49A0A1B0GTD5 131 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 A6NIN4 97 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 SNCGO76070 127 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 EFNA4P52798 201 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 RPL7L1Q6DKI1 246 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 SLC48A1Q6P1K1 146 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 FDCSPQ8NFU4 85 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 TMEM141Q96I45 108 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 NAA60Q9H7X0 242 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 TACC2O95359 2948 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 PKD1L1Q8TDX9 2849 aa1.35□□□□□ -2.19
TRAPPC13-208ENST00000505553 MEGF8Q7Z7M0 2845 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 TGP01266 2768 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 SORL1Q92673 2214 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 F6UZH7 168 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 TNFP01375 233 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 HIST1H1DP16402 221 aaKnown RBP1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 Q6ZS92 163 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 SEC11CQ9BY50 192 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 AGPAT4-IT1Q9H0P7 198 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 MGAM2Q2M2H8 2515 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 WNK1Q9H4A3 2382 aa1.34□□□□□ -2.19
TRAPPC13-208ENST00000505553 PRRC2CQ9Y520 2896 aaKnown RBP1.34□□□□□ -2.2
TRAPPC13-208ENST00000505553 SONP18583 2426 aaKnown RBP1.34□□□□□ -2.2
TRAPPC13-208ENST00000505553 CITO14578 2027 aa1.34□□□□□ -2.2
TRAPPC13-208ENST00000505553 LOC101927531A0A1B0GV80 90 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 C10orf142B7Z368 130 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 SNAPC5O75971 98 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 AKAIN1P0CW23 69 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 CAV3P56539 151 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 FXYD3Q14802 87 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 PPP1R1CQ8WVI7 109 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 C14orf144Q96I85 54 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 CCL19Q99731 98 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 CNTRLQ7Z7A1 2325 aa1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 CHD3Q12873 2000 aaKnown RBP1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 MAP1AP78559 2803 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC13-208ENST00000505553 AKAP6Q13023 2319 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 PIGBOS1A0A0B4J2F0 54 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 TRBV30A0A0K0K1B3 111 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 NBDYA0A0U1RRE5 68 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 TCRBV3S1A0A5B6 114 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 C20orf202A1L168 122 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 SMIM6P0DI80 62 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 RBP2P50120 134 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 MRPS10P82664 201 aaKnown RBP1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 C9orf116Q5BN46 136 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 C12orf73Q69YU5 71 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 CYP2G1PQ6ZSU1 146 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 PP6455Q8WZ26 134 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 IFI27L1Q96BM0 104 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 RPRMQ9NS64 109 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 COA4Q9NYJ1 87 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 SERP1Q9Y6X1 66 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 BIRC6Q9NR09 4857 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 TCHHQ07283 1943 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 ZGRF1Q86YA3 2104 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 ANK2Q01484 3957 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 LOC100130705A0A1B0GUX0 176 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 IFNA17P01571 189 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 TFF1P04155 84 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 MYO7BQ6PIF6 2116 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 Q86TA4 180 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 C5orf56Q8N8D9 126 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 TSKUQ8WUA8 353 aa1.32□□□□□ -2.2
TRAPPC13-208ENST00000505553 DCHS2Q6V1P9 2916 aa1.31□□□□□ -2.2
TRAPPC13-208ENST00000505553 RYR3Q15413 4870 aa1.31□□□□□ -2.2
TRAPPC13-208ENST00000505553 CACNA1CQ13936 2221 aa1.31□□□□□ -2.2
TRAPPC13-208ENST00000505553 TRAV12-3A0A0B4J271 114 aa1.31□□□□□ -2.2
TRAPPC13-208ENST00000505553 CORTO00230 105 aa1.31□□□□□ -2.2
TRAPPC13-208ENST00000505553 CBLN1P23435 193 aa1.31□□□□□ -2.2
TRAPPC13-208ENST00000505553 Q56UQ5 140 aa1.31□□□□□ -2.2
TRAPPC13-208ENST00000505553 Q6AWC8 147 aa1.31□□□□□ -2.2
TRAPPC13-208ENST00000505553 SCN3BQ9NY72 215 aa1.31□□□□□ -2.2
TRAPPC13-208ENST00000505553 ZNF469Q96JG9 3925 aaPredicted RBP1.3□□□□□ -2.2
TRAPPC13-208ENST00000505553 MCRIP1C9JLW8 97 aa1.3□□□□□ -2.2
TRAPPC13-208ENST00000505553 STATHP02808 62 aa1.3□□□□□ -2.2
TRAPPC13-208ENST00000505553 S100A8P05109 93 aa1.3□□□□□ -2.2
TRAPPC13-208ENST00000505553 TFF3Q07654 80 aa1.3□□□□□ -2.2
TRAPPC13-208ENST00000505553 C10orf99Q6UWK7 81 aa1.3□□□□□ -2.2
TRAPPC13-208ENST00000505553 LINC00208Q96KT6 92 aa1.3□□□□□ -2.2
TRAPPC13-208ENST00000505553 PPP3R2Q96LZ3 170 aa1.3□□□□□ -2.2
TRAPPC13-208ENST00000505553 KMT2CQ8NEZ4 4911 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 APOC4-APOC2K7ER74 178 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 FXYD1O00168 92 aa1.29□□□□□ -2.2
TRAPPC13-208ENST00000505553 PIN1P1O15428 100 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms