RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
ATP2C1-208ENST00000504948 DEFB116Q30KQ4 102 aa5.66□□□□□ -1.5
ATP2C1-208ENST00000504948 HIGD2BQ4VC39 106 aa5.66□□□□□ -1.5
ATP2C1-208ENST00000504948 C1orf158Q8N1D5 194 aa5.66□□□□□ -1.5
ATP2C1-208ENST00000504948 FHL2Q14192 279 aa5.66□□□□□ -1.5
ATP2C1-208ENST00000504948 LINC00337Q8N6G1 96 aa5.66□□□□□ -1.5
ATP2C1-208ENST00000504948 IGHV4-30-2A0A087WSY4 118 aa5.66□□□□□ -1.5
ATP2C1-208ENST00000504948 LINC00242Q5T6M2 205 aa5.66□□□□□ -1.5
ATP2C1-208ENST00000504948 ZANQ9Y493 2812 aa5.65□□□□□ -1.5
ATP2C1-208ENST00000504948 TRBV10-1A0A0K0K1A3 114 aa5.65□□□□□ -1.5
ATP2C1-208ENST00000504948 NDUFC2O95298 119 aa5.65□□□□□ -1.5
ATP2C1-208ENST00000504948 RPL28P46779 137 aaKnown RBP5.65□□□□□ -1.5
ATP2C1-208ENST00000504948 C9orf129Q5T035 196 aaKnown RBP5.65□□□□□ -1.5
ATP2C1-208ENST00000504948 CR1P17927 2039 aa5.65□□□□□ -1.5
ATP2C1-208ENST00000504948 VPS13CQ709C8 3753 aa5.65□□□□□ -1.5
ATP2C1-208ENST00000504948 FAM30AQ9NZY2 134 aa5.65□□□□□ -1.5
ATP2C1-208ENST00000504948 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.65□□□□□ -1.51
ATP2C1-208ENST00000504948 UBE2D4Q9Y2X8 147 aa5.65□□□□□ -1.51
ATP2C1-208ENST00000504948 LINC01619G3V211 115 aa5.65□□□□□ -1.51
ATP2C1-208ENST00000504948 C2orf48Q96LS8 159 aa5.65□□□□□ -1.51
ATP2C1-208ENST00000504948 NDUFA1O15239 70 aa5.64□□□□□ -1.51
ATP2C1-208ENST00000504948 FUSP35637 526 aaKnown RBP eCLIP5.64□□□□□ -1.51
ATP2C1-208ENST00000504948 PDZD2O15018 2839 aa5.64□□□□□ -1.51
ATP2C1-208ENST00000504948 Q8N3U1 123 aa5.64□□□□□ -1.51
ATP2C1-208ENST00000504948 ZNF561-AS1K7EIQ3 104 aa5.64□□□□□ -1.51
ATP2C1-208ENST00000504948 SEC61GP60059 68 aa5.64□□□□□ -1.51
ATP2C1-208ENST00000504948 ZNF843Q8N446 348 aa5.64□□□□□ -1.51
ATP2C1-208ENST00000504948 KLK12Q9UKR0 248 aa5.64□□□□□ -1.51
ATP2C1-208ENST00000504948 HELZ2Q9BYK8 2649 aaKnown RBP5.63□□□□□ -1.51
ATP2C1-208ENST00000504948 NDUFC2-KCTD14E9PQ53 114 aa5.63□□□□□ -1.51
ATP2C1-208ENST00000504948 K7EQD1 137 aa5.63□□□□□ -1.51
ATP2C1-208ENST00000504948 IMUPQ9GZP8 106 aa5.63□□□□□ -1.51
ATP2C1-208ENST00000504948 LY6LH3BQJ8 138 aa5.63□□□□□ -1.51
ATP2C1-208ENST00000504948 MSMBP08118 114 aa5.63□□□□□ -1.51
ATP2C1-208ENST00000504948 IL17DQ8TAD2 202 aa5.63□□□□□ -1.51
ATP2C1-208ENST00000504948 TEP1Q99973 2627 aaKnown RBP5.63□□□□□ -1.51
ATP2C1-208ENST00000504948 SMIM1B2RUZ4 78 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 MRPS36P82909 103 aaKnown RBP5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 FLNAP21333 2647 aaKnown RBP5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 TRBV7-7A0A0K0K1E9 115 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 NSD1Q96L73 2696 aaPredicted RBP5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 CMYA5Q8N3K9 4069 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 CCKP06307 115 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 NF1P21359 2839 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 FAM240AA0A1B0GVK7 77 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 TMEM256-PLSCR3K7ERE1 68 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 PMAIP1Q13794 54 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 WFDC13Q8IUB5 93 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 PSMG3-AS1Q96PY0 264 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 FBN2P35556 2912 aa5.62□□□□□ -1.51
ATP2C1-208ENST00000504948 IGKV2-28A0A075B6P5 120 aa5.61□□□□□ -1.51
ATP2C1-208ENST00000504948 DNAJC9-AS1A6NH13 148 aa5.61□□□□□ -1.51
ATP2C1-208ENST00000504948 JMJD7-PLA2G4BH0Y9G9 81 aa5.61□□□□□ -1.51
ATP2C1-208ENST00000504948 IGKV2D-28P01615 120 aa5.61□□□□□ -1.51
ATP2C1-208ENST00000504948 UCNP55089 124 aa5.61□□□□□ -1.51
ATP2C1-208ENST00000504948 WFDC10BQ8IUB3 73 aa5.61□□□□□ -1.51
ATP2C1-208ENST00000504948 SPANXDQ9BXN6 97 aa5.61□□□□□ -1.51
ATP2C1-208ENST00000504948 IGLV4-60A0A075B6I1 120 aa5.61□□□□□ -1.51
ATP2C1-208ENST00000504948 BPY2O14599 106 aa5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 NDUFS5O43920 106 aa5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 B4DSR2 109 aa5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 IGFL3Q6UXB1 125 aa5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 ANK3Q12955 4377 aaKnown RBP5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 DMBT1Q9UGM3 2413 aaPredicted RBP5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 TRAV10A0A0B4J240 114 aa5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 SPAG11BQ08648 103 aa5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 TRBV7-6A0A0J9YX20 115 aa5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 MIFP14174 115 aa5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 LINC00315P59091 139 aa5.6□□□□□ -1.51
ATP2C1-208ENST00000504948 Q8NA96 180 aa5.59□□□□□ -1.51
ATP2C1-208ENST00000504948 ODF3BA8MYP8 253 aa5.59□□□□□ -1.51
ATP2C1-208ENST00000504948 KLLNB2CW77 178 aa5.59□□□□□ -1.51
ATP2C1-208ENST00000504948 SBSPONQ8IVN8 264 aa5.59□□□□□ -1.51
ATP2C1-208ENST00000504948 SMIM26A0A096LP01 95 aa5.59□□□□□ -1.51
ATP2C1-208ENST00000504948 K7EQG2 157 aa5.59□□□□□ -1.51
ATP2C1-208ENST00000504948 NKAPP1Q8N9T2 125 aa5.59□□□□□ -1.51
ATP2C1-208ENST00000504948 FLNCQ14315 2725 aa5.59□□□□□ -1.52
ATP2C1-208ENST00000504948 UBE2BP63146 152 aa5.59□□□□□ -1.52
ATP2C1-208ENST00000504948 LINC01561Q8N1V8 128 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 AMELXQ99217 191 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 CHCHD7Q9BUK0 85 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 KIF25-AS1Q9Y6Z4 181 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 Q6JHZ5 121 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 IGKV2D-24A0A075B6R9 120 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 EBI3Q14213 229 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 DEFB135Q30KP9 77 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 CAMK2N2Q96S95 79 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 PRO0628Q9UI54 55 aa5.58□□□□□ -1.52
ATP2C1-208ENST00000504948 CRYGAP11844 174 aa5.57□□□□□ -1.52
ATP2C1-208ENST00000504948 TM2D3Q9BRN9 247 aa5.57□□□□□ -1.52
ATP2C1-208ENST00000504948 LMO4P61968 165 aa5.57□□□□□ -1.52
ATP2C1-208ENST00000504948 MAP6D1Q9H9H5 199 aa5.57□□□□□ -1.52
ATP2C1-208ENST00000504948 A0A1W2PPR1 153 aa5.57□□□□□ -1.52
ATP2C1-208ENST00000504948 MED14OSP0DP75 135 aa5.57□□□□□ -1.52
ATP2C1-208ENST00000504948 NTM-AS1Q6ZSK4 140 aa5.57□□□□□ -1.52
ATP2C1-208ENST00000504948 C6orf223Q8N319 242 aa5.57□□□□□ -1.52
ATP2C1-208ENST00000504948 HIVEP1P15822 2718 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms