RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SPAG11AQ6PDA7 123 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 C4orf3Q8WVX3 66 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZNF625Q96I27 306 aaPredicted RBP1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 TTTY10Q9BZA0 68 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 KCNQ1DNQ9H478 68 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZNRD1Q9P1U0 126 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ANKRD12Q6UB98 2062 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGHV3-64A0A075B6Q5 118 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 CLPSL1A2RUU4 121 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 C17orf98A8MV24 154 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 NDUFA1O15239 70 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 MRPL33O75394 65 aaKnown RBP1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV1-17P01599 117 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGLV3-19P01714 112 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 CCL18P55774 89 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 COX17Q14061 63 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 LINC00483Q53H64 154 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 SPATA8Q6RVD6 105 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 Q6ZS52 159 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 NTM-AS1Q6ZSK4 140 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 DEFB106AQ8N104 65 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 MIR7-3HGQ8N6C7 128 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 Q8NAQ8 132 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 WFDC9Q8NEX5 89 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 C16orf74Q96GX8 76 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 C20orf166-AS1Q96NR2 134 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 WFDC10AQ9H1F0 79 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 PCNX2A6NKB5 2137 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 ETDCA0A1B0GVM5 59 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 NUPR2A6NF83 97 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 NDUFA4O00483 81 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGHV3-53P01767 116 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 CCL3L1P16619 93 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 KRTAP25-1Q3LHN0 102 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 CSAG1Q6PB30 78 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 ADM2Q7Z4H4 148 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 LINC00308Q8TCZ7 52 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 SPRR4Q96PI1 79 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 TTTY12Q9BZ98 90 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 MYOFQ9NZM1 2061 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 NUP214P35658 2090 aaPredicted RBP1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 MDC1Q14676 2089 aaKnown RBP1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 CEP192Q8TEP8 1941 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 DSCAMO60469 2012 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZFHX3Q15911 3703 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 TRGV2A0A075B6R0 118 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV1D-37A0A075B6S9 117 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV1OR2-108A0A075B7D4 117 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 TRGV4A0A0C4DH28 118 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 SPRR5A0A1B0GTR4 108 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGLV7-43P04211 117 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 DEFA4P12838 97 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 HAMPP81172 84 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 PRCDQ00LT1 54 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 Q8TAT8 98 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 CIRBP-AS1Q8TBR5 109 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 GAFA1Q96PS6 74 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 ATG2BQ96BY7 2078 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 HIVEP2P31629 2446 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV3-7A0A075B6H7 116 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV2-28A0A075B6P5 120 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV3D-11A0A0A0MRZ8 115 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV2-29A2NJV5 120 aaPredicted RBP1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 A8MUU9 505 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 CCL22O00626 93 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 NCR3O14931 201 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 INSP01308 110 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV2D-28P01615 120 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV4-1P06312 121 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 P0C880 135 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 TLX1NBP0CAT3 122 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 PRB4P10163 310 aaPredicted RBP1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 COX7BP24311 80 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 CRIP1P50238 77 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 POLR2KP53803 58 aaKnown RBP1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 Q5W150 140 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 DEFB132Q7Z7B7 95 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 COA5Q86WW8 74 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 FDCSPQ8NFU4 85 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 SNRNP200O75643 2136 aaKnown RBP1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 TET1Q8NFU7 2136 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 MPDZO75970 2070 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 MYO9BQ13459 2157 aa1.15□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV2D-24A0A075B6R9 120 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 DEFB131BA0A096LNP1 70 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 A0A1B0GU33 70 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 LRCOL1A6NCL2 159 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 SPINK7P58062 85 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 DEFB113Q30KQ7 82 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 C9orf163Q8N9P6 203 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 HEATR1Q9H583 2144 aaKnown RBP1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 IGLV4-60A0A075B6I1 120 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 TRBV6-4A0A1B0GX49 114 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 TFF1P04155 84 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 RPS27P42677 84 aaKnown RBP1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 DEFB112Q30KQ8 113 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 PIGYQ3MUY2 71 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms