RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 KRTAP10-3P60369 221 aa11.52□□□□□ -0.57
COL6A1-206ENST00000498614 TMEM243Q9BU79 118 aa11.52□□□□□ -0.57
COL6A1-206ENST00000498614 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
COL6A1-206ENST00000498614 UBE2L6O14933 153 aa11.51□□□□□ -0.57
COL6A1-206ENST00000498614 INAFM2P0DMQ5 153 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 CSNK1G2-AS1Q8NCQ2 148 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 COX7B2Q8TF08 81 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 TMEM126AQ9H061 195 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 PF4P02776 101 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 SND1-IT1Q9HBX3 110 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 TOMM7Q9P0U1 55 aa11.5□□□□□ -0.57
COL6A1-206ENST00000498614 A0A087WYN8 130 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 C5orf38Q86SI9 138 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 VWFP04275 2813 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 TRGV4A0A0C4DH28 118 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 IGKV3OR2-268A0A0C4DH90 116 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 C9orf129Q5T035 196 aaKnown RBP11.49□□□□□ -0.57
COL6A1-206ENST00000498614 C3orf22Q8N5N4 141 aa11.49□□□□□ -0.57
COL6A1-206ENST00000498614 SMIM11BQ8TCY0 68 aa11.48□□□□□ -0.57
COL6A1-206ENST00000498614 C9orf153Q5TBE3 101 aa11.48□□□□□ -0.57
COL6A1-206ENST00000498614 CXCL5P42830 114 aa11.47□□□□□ -0.57
COL6A1-206ENST00000498614 LINC00158P58513 81 aa11.47□□□□□ -0.57
COL6A1-206ENST00000498614 OVOL2Q9BRP0 275 aa11.47□□□□□ -0.57
COL6A1-206ENST00000498614 TRBV6-4A0A1B0GX49 114 aa11.46□□□□□ -0.57
COL6A1-206ENST00000498614 CCL18P55774 89 aa11.46□□□□□ -0.58
COL6A1-206ENST00000498614 IGLV4-60A0A075B6I1 120 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 UQCRQO14949 82 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 DNAL4O96015 105 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 C14orf132Q9NPU4 83 aa11.45□□□□□ -0.58
COL6A1-206ENST00000498614 ATP5G1P05496 136 aa11.44□□□□□ -0.58
COL6A1-206ENST00000498614 FHL2Q14192 279 aa11.44□□□□□ -0.58
COL6A1-206ENST00000498614 STAB1Q9NY15 2570 aa11.43□□□□□ -0.58
COL6A1-206ENST00000498614 LINC00526Q96FQ7 95 aa11.43□□□□□ -0.58
COL6A1-206ENST00000498614 COL6A5A8TX70 2615 aa11.43□□□□□ -0.58
COL6A1-206ENST00000498614 DEFB130BP0DP73 79 aa11.42□□□□□ -0.58
COL6A1-206ENST00000498614 DEFB130AP0DP74 79 aa11.42□□□□□ -0.58
COL6A1-206ENST00000498614 PFN2P35080 140 aa11.42□□□□□ -0.58
COL6A1-206ENST00000498614 IGHV3OR16-9A0A0B4J2B5 98 aa11.41□□□□□ -0.58
COL6A1-206ENST00000498614 HIST1H4AP62805 103 aaKnown RBP11.41□□□□□ -0.58
COL6A1-206ENST00000498614 KLK5Q9Y337 293 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-206ENST00000498614 LECT2O14960 151 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 C2orf48Q96LS8 159 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 H0YGX0 51 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 COX7CP15954 63 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 OBSCN-AS1Q96MR7 158 aa11.4□□□□□ -0.58
COL6A1-206ENST00000498614 IGKV3D-7A0A0C4DH55 119 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 PAX4O43316 350 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 SLPIP03973 132 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 LINC00846Q9NV44 126 aa11.39□□□□□ -0.59
COL6A1-206ENST00000498614 NCR3O14931 201 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 A0A087WZ39 114 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 LINC00482Q8N8I6 264 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 OR13C6PQ8NH95 151 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 SPATA3Q8NHX4 192 aa11.38□□□□□ -0.59
COL6A1-206ENST00000498614 C11orf68Q9H3H3 251 aaKnown RBP11.38□□□□□ -0.59
COL6A1-206ENST00000498614 ATOX1O00244 68 aa11.35□□□□□ -0.59
COL6A1-206ENST00000498614 Q6JHZ5 121 aa11.34□□□□□ -0.59
COL6A1-206ENST00000498614 GYPEP15421 78 aa11.34□□□□□ -0.59
COL6A1-206ENST00000498614 KIR2DL5BQ8NHK3 375 aa11.34□□□□□ -0.59
COL6A1-206ENST00000498614 A0A087WVE0 104 aa11.33□□□□□ -0.6
COL6A1-206ENST00000498614 RPL18AQ02543 176 aaKnown RBP11.33□□□□□ -0.6
COL6A1-206ENST00000498614 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
COL6A1-206ENST00000498614 CRYGAP11844 174 aa11.33□□□□□ -0.6
COL6A1-206ENST00000498614 X6R8D5 127 aa11.33□□□□□ -0.6
COL6A1-206ENST00000498614 LOC107984640A0A0U1RRK4 108 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 SS18Q15532 418 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 C6orf226Q5I0X4 101 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 CYSTM1Q9H1C7 97 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 A0A096LPF7 62 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 hADV29S1A0JD25 119 aa11.32□□□□□ -0.6
COL6A1-206ENST00000498614 LINC00612Q8N6U2 182 aa11.31□□□□□ -0.6
COL6A1-206ENST00000498614 NBEAL2Q6ZNJ1 2754 aa11.31□□□□□ -0.6
COL6A1-206ENST00000498614 A0A1B0GX51 115 aa11.31□□□□□ -0.6
COL6A1-206ENST00000498614 PKD1L1Q8TDX9 2849 aa11.31□□□□□ -0.6
COL6A1-206ENST00000498614 XCL1P47992 114 aa11.3□□□□□ -0.6
COL6A1-206ENST00000498614 ORMDL1Q9P0S3 153 aa11.3□□□□□ -0.6
COL6A1-206ENST00000498614 LINC01561Q8N1V8 128 aa11.3□□□□□ -0.6
COL6A1-206ENST00000498614 DEFB4AO15263 64 aa11.28□□□□□ -0.6
COL6A1-206ENST00000498614 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
COL6A1-206ENST00000498614 CLPSL2Q6UWE3 100 aa11.28□□□□□ -0.6
COL6A1-206ENST00000498614 NANOS2P60321 138 aaKnown RBP11.27□□□□□ -0.6
COL6A1-206ENST00000498614 PRO0255Q9UI72 69 aa11.27□□□□□ -0.61
COL6A1-206ENST00000498614 CCKP06307 115 aa11.26□□□□□ -0.61
COL6A1-206ENST00000498614 DEFB135Q30KP9 77 aa11.26□□□□□ -0.61
COL6A1-206ENST00000498614 USP17L23D6RBM5 183 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 LINC00167Q96N53 147 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 SERP2Q8N6R1 65 aa11.25□□□□□ -0.61
COL6A1-206ENST00000498614 CMYA5Q8N3K9 4069 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 J3KT08 172 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 Q8IZM0 81 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 MDFIQ99750 246 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
COL6A1-206ENST00000498614 Q8N814 137 aa11.23□□□□□ -0.61
COL6A1-206ENST00000498614 A0A1B0GUV1 79 aa11.22□□□□□ -0.61
COL6A1-206ENST00000498614 LYRM9A8MSI8 78 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms