RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 LINC00846Q9NV44 126 aa10.85□□□□□ -0.67
C4A-259ENST00000498271 SMCPP49901 116 aaPredicted RBP10.84□□□□□ -0.67
C4A-259ENST00000498271 SBSPONQ8IVN8 264 aa10.84□□□□□ -0.67
C4A-259ENST00000498271 CXCL6P80162 114 aa10.84□□□□□ -0.67
C4A-259ENST00000498271 IGKV2-24A0A0C4DH68 120 aa10.84□□□□□ -0.67
C4A-259ENST00000498271 LINC00482Q8N8I6 264 aa10.83□□□□□ -0.68
C4A-259ENST00000498271 BRI3O95415 125 aa10.82□□□□□ -0.68
C4A-259ENST00000498271 PRM2P04554 102 aa10.82□□□□□ -0.68
C4A-259ENST00000498271 ANKRD11Q6UB99 2663 aaPredicted RBP10.82□□□□□ -0.68
C4A-259ENST00000498271 ESRGQ1W209 222 aa10.82□□□□□ -0.68
C4A-259ENST00000498271 C2CD3Q4AC94 2353 aa10.82□□□□□ -0.68
C4A-259ENST00000498271 BBC3Q96PG8 261 aaPredicted RBP10.82□□□□□ -0.68
C4A-259ENST00000498271 CELA1Q9UNI1 258 aa10.82□□□□□ -0.68
C4A-259ENST00000498271 MYO9AB2RTY4 2548 aa10.81□□□□□ -0.68
C4A-259ENST00000498271 COX6A2Q02221 97 aa10.81□□□□□ -0.68
C4A-259ENST00000498271 LINC01561Q8N1V8 128 aa10.81□□□□□ -0.68
C4A-259ENST00000498271 IGKV2-28A0A075B6P5 120 aa10.8□□□□□ -0.68
C4A-259ENST00000498271 IGKV2D-28P01615 120 aa10.8□□□□□ -0.68
C4A-259ENST00000498271 TET2Q6N021 2002 aaPredicted RBP10.8□□□□□ -0.68
C4A-259ENST00000498271 Q6ZVQ6 151 aa10.8□□□□□ -0.68
C4A-259ENST00000498271 ZNF706Q9Y5V0 76 aaPredicted RBP10.8□□□□□ -0.68
C4A-259ENST00000498271 EGFEM1PQ0D2K5 195 aa10.79□□□□□ -0.68
C4A-259ENST00000498271 CYSRT1A8MQ03 144 aa10.79□□□□□ -0.68
C4A-259ENST00000498271 LINC00208Q96KT6 92 aa10.79□□□□□ -0.68
C4A-259ENST00000498271 LOC100131303A0A0U1RQF7 123 aa10.79□□□□□ -0.68
C4A-259ENST00000498271 LINC01547P58512 204 aaPredicted RBP10.78□□□□□ -0.68
C4A-259ENST00000498271 C1orf137Q5JT78 98 aa10.78□□□□□ -0.68
C4A-259ENST00000498271 A0A096LNI7 61 aa10.77□□□□□ -0.68
C4A-259ENST00000498271 ZNF580Q9UK33 172 aa10.77□□□□□ -0.69
C4A-259ENST00000498271 A0A0J9YWU9 116 aa10.76□□□□□ -0.69
C4A-259ENST00000498271 LRCOL1A6NCL2 159 aa10.76□□□□□ -0.69
C4A-259ENST00000498271 BEAN1Q3B7T3 259 aa10.76□□□□□ -0.69
C4A-259ENST00000498271 RETNQ9HD89 108 aa10.76□□□□□ -0.69
C4A-259ENST00000498271 hDV103S1A0JD37 113 aa10.75□□□□□ -0.69
C4A-259ENST00000498271 LINC00575Q6W349 94 aa10.75□□□□□ -0.69
C4A-259ENST00000498271 LINC00474Q9P2X8 69 aa10.74□□□□□ -0.69
C4A-259ENST00000498271 F8WDY8 70 aa10.74□□□□□ -0.69
C4A-259ENST00000498271 PSPHP1O15172 72 aa10.74□□□□□ -0.69
C4A-259ENST00000498271 LIMD2Q9BT23 127 aa10.74□□□□□ -0.69
C4A-259ENST00000498271 KRTAP10-9P60411 292 aa10.74□□□□□ -0.69
C4A-259ENST00000498271 PCSK5Q92824 1860 aa10.74□□□□□ -0.69
C4A-259ENST00000498271 IGLV5-39A0A0G2JS06 123 aa10.73□□□□□ -0.69
C4A-259ENST00000498271 CHD7Q9P2D1 2997 aa10.73□□□□□ -0.69
C4A-259ENST00000498271 KIF25-AS1Q9Y6Z4 181 aa10.73□□□□□ -0.69
C4A-259ENST00000498271 BPTFQ12830 3046 aa10.73□□□□□ -0.69
C4A-259ENST00000498271 PRRC2AP48634 2157 aaKnown RBP10.73□□□□□ -0.69
C4A-259ENST00000498271 ABCA2Q9BZC7 2435 aa10.73□□□□□ -0.69
C4A-259ENST00000498271 DOPEY1Q5JWR5 2465 aa10.73□□□□□ -0.69
C4A-259ENST00000498271 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
C4A-259ENST00000498271 HTTP42858 3142 aa10.72□□□□□ -0.69
C4A-259ENST00000498271 ODF3L2Q3SX64 289 aa10.71□□□□□ -0.69
C4A-259ENST00000498271 LINC00337Q8N6G1 96 aa10.71□□□□□ -0.69
C4A-259ENST00000498271 C16orf95Q9H693 158 aa10.71□□□□□ -0.69
C4A-259ENST00000498271 A0A1B0GUV1 79 aa10.7□□□□□ -0.7
C4A-259ENST00000498271 C10orf25Q5T742 122 aa10.69□□□□□ -0.7
C4A-259ENST00000498271 C5orf42Q9H799 3197 aa10.69□□□□□ -0.7
C4A-259ENST00000498271 C4orf26Q17RF5 130 aa10.69□□□□□ -0.7
C4A-259ENST00000498271 IGLV4-60A0A075B6I1 120 aa10.68□□□□□ -0.7
C4A-259ENST00000498271 LRRK2Q5S007 2527 aa10.67□□□□□ -0.7
C4A-259ENST00000498271 RPL37AP8A6NKH3 93 aa10.67□□□□□ -0.7
C4A-259ENST00000498271 KPRPQ5T749 579 aaPredicted RBP10.67□□□□□ -0.7
C4A-259ENST00000498271 PRR3P79522 188 aaKnown RBP10.66□□□□□ -0.7
C4A-259ENST00000498271 USP9XQ93008 2570 aaPredicted RBP10.66□□□□□ -0.7
C4A-259ENST00000498271 A0A1B0GW54 56 aa10.66□□□□□ -0.7
C4A-259ENST00000498271 HCG22E2RYF7 251 aa10.66□□□□□ -0.7
C4A-259ENST00000498271 H0Y9P7 68 aa10.66□□□□□ -0.7
C4A-259ENST00000498271 ZNF462Q96JM2 2506 aa10.65□□□□□ -0.7
C4A-259ENST00000498271 PLAC8L1A1L4L8 177 aa10.65□□□□□ -0.7
C4A-259ENST00000498271 C9orf116Q5BN46 136 aaPredicted RBP10.65□□□□□ -0.7
C4A-259ENST00000498271 NANOS2P60321 138 aaKnown RBP10.64□□□□□ -0.71
C4A-259ENST00000498271 IGLV5-45A0A087WSX0 123 aa10.64□□□□□ -0.71
C4A-259ENST00000498271 OXLD1Q5BKU9 147 aa10.64□□□□□ -0.71
C4A-259ENST00000498271 TLN2Q9Y4G6 2542 aa10.63□□□□□ -0.71
C4A-259ENST00000498271 FHL2Q14192 279 aa10.63□□□□□ -0.71
C4A-259ENST00000498271 IGHV4-30-4P0DP06 118 aa10.62□□□□□ -0.71
C4A-259ENST00000498271 C2orf48Q96LS8 159 aa10.62□□□□□ -0.71
C4A-259ENST00000498271 USP9YO00507 2555 aaPredicted RBP10.62□□□□□ -0.71
C4A-259ENST00000498271 SPTBN4Q9H254 2564 aa10.62□□□□□ -0.71
C4A-259ENST00000498271 LINC00315P59091 139 aa10.62□□□□□ -0.71
C4A-259ENST00000498271 REG3GQ6UW15 175 aa10.62□□□□□ -0.71
C4A-259ENST00000498271 Q6ZSN1 163 aa10.61□□□□□ -0.71
C4A-259ENST00000498271 ZFYVE26Q68DK2 2539 aa10.6□□□□□ -0.71
C4A-259ENST00000498271 SPINK6Q6UWN8 80 aa10.6□□□□□ -0.71
C4A-259ENST00000498271 IGLV1-51P01701 117 aa10.59□□□□□ -0.71
C4A-259ENST00000498271 PRRC2CQ9Y520 2896 aaKnown RBP10.59□□□□□ -0.71
C4A-259ENST00000498271 AGRNO00468 2067 aa10.59□□□□□ -0.71
C4A-259ENST00000498271 JMJD1CQ15652 2540 aa10.59□□□□□ -0.71
C4A-259ENST00000498271 LOC110117498A0A087WWA1 95 aa10.58□□□□□ -0.72
C4A-259ENST00000498271 Q8N2B8 174 aa10.58□□□□□ -0.72
C4A-259ENST00000498271 SPATA3Q8NHX4 192 aa10.58□□□□□ -0.72
C4A-259ENST00000498271 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
C4A-259ENST00000498271 SMR3AQ99954 134 aa10.58□□□□□ -0.72
C4A-259ENST00000498271 C1orf134Q5TEV5 83 aa10.58□□□□□ -0.72
C4A-259ENST00000498271 M0R2N4 97 aa10.57□□□□□ -0.72
C4A-259ENST00000498271 ABCA12Q86UK0 2595 aa10.57□□□□□ -0.72
C4A-259ENST00000498271 H3BPC8 53 aa10.57□□□□□ -0.72
C4A-259ENST00000498271 PTPRBP23467 1997 aa10.56□□□□□ -0.72
C4A-259ENST00000498271 CHD9Q3L8U1 2897 aa10.56□□□□□ -0.72
C4A-259ENST00000498271 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.55□□□□□ -0.72
C4A-259ENST00000498271 FAM218AQ96MZ4 157 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms