RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PPIP5K1Q6PFW1 1433 aa-0.73□□□□□ -2.53
SMC4-227ENST00000497984 C10orf71Q711Q0 1435 aa-0.73□□□□□ -2.53
SMC4-227ENST00000497984 ATP10BO94823 1461 aa-0.73□□□□□ -2.53
SMC4-227ENST00000497984 I3L2K1 104 aa-0.74□□□□□ -2.53
SMC4-227ENST00000497984 K7ERU9 68 aa-0.74□□□□□ -2.53
SMC4-227ENST00000497984 SCIMPQ6UWF3 145 aa-0.74□□□□□ -2.53
SMC4-227ENST00000497984 TTTY10Q9BZA0 68 aa-0.74□□□□□ -2.53
SMC4-227ENST00000497984 TP53AIP1Q9HCN2 124 aa-0.74□□□□□ -2.53
SMC4-227ENST00000497984 GSKIPQ9P0R6 139 aa-0.74□□□□□ -2.53
SMC4-227ENST00000497984 ANKRD30AQ9BXX3 1397 aa-0.74□□□□□ -2.53
SMC4-227ENST00000497984 MYO7BQ6PIF6 2116 aa-0.74□□□□□ -2.53
SMC4-227ENST00000497984 LRRC37A3O60309 1634 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 IFT172Q9UG01 1749 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 BCORQ6W2J9 1755 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 PLXNB2O15031 1838 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 CDK5RAP2Q96SN8 1893 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 C20orf202A1L168 122 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 H3BNG1 76 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 PPP1R17O96001 155 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 S100A3P33764 101 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 DCDP81605 110 aaKnown RBP-0.75□□□□□ -2.53
SMC4-227ENST00000497984 PYDC1Q8WXC3 89 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 SEC11CQ9BY50 192 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 ARHGAP35Q9NRY4 1499 aa-0.75□□□□□ -2.53
SMC4-227ENST00000497984 ZC3H13Q5T200 1668 aaKnown RBP-0.75□□□□□ -2.53
SMC4-227ENST00000497984 M0R135 149 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 SIX6O95475 246 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 ALX1Q15699 326 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 DEFB136Q30KP8 78 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 FDCSPQ8NFU4 85 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 R4GMQ9 66 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 FHAD1B1AJZ9 1412 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 IFT140Q96RY7 1462 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 ARHGEF12Q9NZN5 1544 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 ZNF831Q5JPB2 1677 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 RGPD8O14715 1765 aaPredicted RBP-0.76□□□□□ -2.53
SMC4-227ENST00000497984 RGPD5Q99666 1765 aa-0.76□□□□□ -2.53
SMC4-227ENST00000497984 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.77□□□□□ -2.53
SMC4-227ENST00000497984 PRDM15P57071 1507 aaPredicted RBP-0.77□□□□□ -2.53
SMC4-227ENST00000497984 MRC1P22897 1456 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 PXDNQ92626 1479 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 FXYD6-FXYD2A0A087WZ82 144 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 HCG22E2RYF7 251 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 SPINK4O60575 86 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 GUCA1AP43080 201 aaPredicted RBP-0.77□□□□□ -2.53
SMC4-227ENST00000497984 DEFB110Q30KQ9 67 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 SPAG11AQ6PDA7 123 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 CLPSL2Q6UWE3 100 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 AKAP14Q86UN6 197 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 TSTD1Q8NFU3 115 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 SDF2Q99470 211 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 DPH3P1Q9H4G8 78 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 DOCK11Q5JSL3 2073 aa-0.77□□□□□ -2.53
SMC4-227ENST00000497984 CHD1O14646 1710 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 PLXNC1O60486 1568 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 KIAA0586Q9BVV6 1533 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 ZNF518AQ6AHZ1 1483 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 A0A087WVE0 104 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 CTXND1A0A1B0GTU2 59 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 C9orf92A6NGG3 77 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 KCNRGQ8N5I3 272 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 SMIM4Q8WVI0 70 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 CUL7Q14999 1698 aa-0.78□□□□□ -2.53
SMC4-227ENST00000497984 ARFGEF1Q9Y6D6 1849 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 TRBV6-1A0A0K0K1D8 114 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 SSSCA1O60232 199 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 RPS25P62851 125 aaKnown RBP-0.79□□□□□ -2.54
SMC4-227ENST00000497984 DEFB135Q30KP9 77 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 PIGYQ3MUY2 71 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 DEFB121Q5J5C9 76 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 LZICQ8WZA0 190 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 CRIPTQ9P021 101 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 PARP4Q9UKK3 1724 aaKnown RBP-0.79□□□□□ -2.54
SMC4-227ENST00000497984 CROCC2H7BZ55 1655 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 NRXN3Q9Y4C0 1643 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 ERCC6L2Q5T890 1561 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 MAST1Q9Y2H9 1570 aa-0.79□□□□□ -2.54
SMC4-227ENST00000497984 ANKRD50Q9ULJ7 1429 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 QRICH2Q9H0J4 1663 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 TRAV13-2A0A0B4J235 113 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 COX6B1P14854 86 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 SPRR1BP22528 89 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 DR1Q01658 176 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 C10orf128Q5T292 105 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 AMELXQ99217 191 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 LINC00472Q9H8W2 130 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 TPT1P8Q9HAU6 139 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 APLNQ9ULZ1 77 aa-0.8□□□□□ -2.54
SMC4-227ENST00000497984 NCOA3Q9Y6Q9 1424 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 CRYBG1Q9Y4K1 1723 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 PREX2Q70Z35 1606 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 COPZ1P61923 177 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 PRLHP81277 87 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 DEFB123Q8N688 67 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 COPZ2Q9P299 210 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 ERVK-7P63135 1459 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 NCOA2Q15596 1464 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 MRC2Q9UBG0 1479 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 WDR7Q9Y4E6 1490 aa-0.81□□□□□ -2.54
SMC4-227ENST00000497984 RIMS1Q86UR5 1692 aaKnown RBP-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms