RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
TRAPPC12-223ENST00000497597 CDC42SE2Q9NRR3 84 aa7.55□□□□□ -1.2
TRAPPC12-223ENST00000497597 PF4P02776 101 aa7.54□□□□□ -1.2
TRAPPC12-223ENST00000497597 CCKP06307 115 aa7.54□□□□□ -1.2
TRAPPC12-223ENST00000497597 DEFB112Q30KQ8 113 aa7.54□□□□□ -1.2
TRAPPC12-223ENST00000497597 NOTCH2Q04721 2471 aa7.54□□□□□ -1.2
TRAPPC12-223ENST00000497597 LRCOL1A6NCL2 159 aa7.54□□□□□ -1.2
TRAPPC12-223ENST00000497597 A6NDX4 124 aa7.54□□□□□ -1.2
TRAPPC12-223ENST00000497597 K7EQD1 137 aa7.54□□□□□ -1.2
TRAPPC12-223ENST00000497597 DEFB130BP0DP73 79 aa7.53□□□□□ -1.2
TRAPPC12-223ENST00000497597 DEFB130AP0DP74 79 aa7.53□□□□□ -1.2
TRAPPC12-223ENST00000497597 C11orf72Q8NBR9 251 aa7.53□□□□□ -1.2
TRAPPC12-223ENST00000497597 PLA2G2AP14555 144 aa7.53□□□□□ -1.2
TRAPPC12-223ENST00000497597 C6orf99Q4VX62 202 aa7.53□□□□□ -1.2
TRAPPC12-223ENST00000497597 IGLV4-60A0A075B6I1 120 aa7.52□□□□□ -1.21
TRAPPC12-223ENST00000497597 H3BUA1 57 aa7.52□□□□□ -1.21
TRAPPC12-223ENST00000497597 TRAV10A0A0B4J240 114 aa7.52□□□□□ -1.21
TRAPPC12-223ENST00000497597 GCN1Q92616 2671 aaKnown RBP7.52□□□□□ -1.21
TRAPPC12-223ENST00000497597 IGLV5-45A0A087WSX0 123 aa7.52□□□□□ -1.21
TRAPPC12-223ENST00000497597 AVPP01185 164 aa7.52□□□□□ -1.21
TRAPPC12-223ENST00000497597 WIPF1O43516 503 aa7.51□□□□□ -1.21
TRAPPC12-223ENST00000497597 IGLV1-40P01703 118 aa7.51□□□□□ -1.21
TRAPPC12-223ENST00000497597 C9orf116Q5BN46 136 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC12-223ENST00000497597 PRO0628Q9UI54 55 aa7.51□□□□□ -1.21
TRAPPC12-223ENST00000497597 ACANP16112 2415 aa7.51□□□□□ -1.21
TRAPPC12-223ENST00000497597 IGHV4-30-2A0A087WSY4 118 aa7.51□□□□□ -1.21
TRAPPC12-223ENST00000497597 JMJD7-PLA2G4BH0Y9G9 81 aa7.51□□□□□ -1.21
TRAPPC12-223ENST00000497597 MAP6D1Q9H9H5 199 aa7.5□□□□□ -1.21
TRAPPC12-223ENST00000497597 NF1P21359 2839 aa7.5□□□□□ -1.21
TRAPPC12-223ENST00000497597 APCP25054 2843 aa7.5□□□□□ -1.21
TRAPPC12-223ENST00000497597 UCNP55089 124 aa7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 SS18Q15532 418 aa7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 CCL19Q99731 98 aa7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 ESM1Q9NQ30 184 aa7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 SERP1Q9Y6X1 66 aa7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 TMEM256-PLSCR3K7ERE1 68 aa7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 MSMBP08118 114 aa7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 ZNF462Q96JM2 2506 aa7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 Q8N9L7 120 aa7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 ANKRD17O75179 2603 aaKnown RBP7.49□□□□□ -1.21
TRAPPC12-223ENST00000497597 UTP20O75691 2785 aaKnown RBP7.48□□□□□ -1.21
TRAPPC12-223ENST00000497597 M0R2N4 97 aa7.48□□□□□ -1.21
TRAPPC12-223ENST00000497597 TRBV6-4A0A1B0GX49 114 aa7.47□□□□□ -1.21
TRAPPC12-223ENST00000497597 C1orf195Q5TG92 126 aa7.47□□□□□ -1.21
TRAPPC12-223ENST00000497597 Q8N3U1 123 aa7.47□□□□□ -1.21
TRAPPC12-223ENST00000497597 ZNF843Q8N446 348 aa7.47□□□□□ -1.21
TRAPPC12-223ENST00000497597 Q8N814 137 aa7.47□□□□□ -1.21
TRAPPC12-223ENST00000497597 SMIM26A0A096LP01 95 aa7.47□□□□□ -1.21
TRAPPC12-223ENST00000497597 LINC00269Q8N2A0 174 aa7.47□□□□□ -1.21
TRAPPC12-223ENST00000497597 WFDC10AQ9H1F0 79 aa7.47□□□□□ -1.21
TRAPPC12-223ENST00000497597 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.21
TRAPPC12-223ENST00000497597 TMEM89A2RUT3 159 aa7.46□□□□□ -1.21
TRAPPC12-223ENST00000497597 IBA57-AS1B1ANH7 110 aa7.46□□□□□ -1.21
TRAPPC12-223ENST00000497597 H7BZZ5 65 aa7.46□□□□□ -1.21
TRAPPC12-223ENST00000497597 TRAV7A0A075B6U4 112 aa7.46□□□□□ -1.22
TRAPPC12-223ENST00000497597 TRBV7-6A0A0J9YX20 115 aa7.46□□□□□ -1.22
TRAPPC12-223ENST00000497597 FBXL19-AS1Q494R0 122 aa7.46□□□□□ -1.22
TRAPPC12-223ENST00000497597 Q6ZQY7 126 aa7.46□□□□□ -1.22
TRAPPC12-223ENST00000497597 TM2D3Q9BRN9 247 aa7.46□□□□□ -1.22
TRAPPC12-223ENST00000497597 CR1P17927 2039 aa7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 V9GYY9 64 aa7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 AKAP9Q99996 3911 aa7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 PRR4Q16378 134 aa7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 KLK9Q2XQG4 91 aa7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 MXRA5Q9NR99 2828 aa7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 IGHV4-28A0A0C4DH34 117 aa7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 NDUFC2-KCTD14E9PQ53 114 aa7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 K7ENP7 123 aa7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 LINC01547P58512 204 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC12-223ENST00000497597 CFAP46Q8IYW2 2715 aa7.44□□□□□ -1.22
TRAPPC12-223ENST00000497597 A0A087WZ39 114 aa7.44□□□□□ -1.22
TRAPPC12-223ENST00000497597 ATP5EP2Q5VTU8 51 aa7.44□□□□□ -1.22
TRAPPC12-223ENST00000497597 Q6ZVQ6 151 aa7.44□□□□□ -1.22
TRAPPC12-223ENST00000497597 HTN3P15516 51 aa7.43□□□□□ -1.22
TRAPPC12-223ENST00000497597 C1orf158Q8N1D5 194 aa7.43□□□□□ -1.22
TRAPPC12-223ENST00000497597 FP248Q71RG6 208 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC12-223ENST00000497597 MIFP14174 115 aa7.42□□□□□ -1.22
TRAPPC12-223ENST00000497597 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
TRAPPC12-223ENST00000497597 FLNCQ14315 2725 aa7.42□□□□□ -1.22
TRAPPC12-223ENST00000497597 XAGE1AQ9HD64 81 aa7.42□□□□□ -1.22
TRAPPC12-223ENST00000497597 IGHV3OR16-9A0A0B4J2B5 98 aa7.41□□□□□ -1.22
TRAPPC12-223ENST00000497597 B4DSR2 109 aa7.41□□□□□ -1.22
TRAPPC12-223ENST00000497597 ANGP03950 147 aaKnown RBP7.41□□□□□ -1.22
TRAPPC12-223ENST00000497597 GNLYP22749 145 aa7.41□□□□□ -1.22
TRAPPC12-223ENST00000497597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC12-223ENST00000497597 CELA1Q9UNI1 258 aa7.41□□□□□ -1.22
TRAPPC12-223ENST00000497597 LINC00959A0A1B0GUT2 108 aa7.4□□□□□ -1.22
TRAPPC12-223ENST00000497597 SPATA3Q8NHX4 192 aa7.4□□□□□ -1.22
TRAPPC12-223ENST00000497597 GYPEP15421 78 aa7.4□□□□□ -1.22
TRAPPC12-223ENST00000497597 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.23
TRAPPC12-223ENST00000497597 SEC61GP60059 68 aa7.4□□□□□ -1.23
TRAPPC12-223ENST00000497597 DEFB105AQ8NG35 78 aa7.4□□□□□ -1.23
TRAPPC12-223ENST00000497597 TEX15Q9BXT5 2789 aa7.39□□□□□ -1.23
TRAPPC12-223ENST00000497597 NREPQ16612 68 aa7.39□□□□□ -1.23
TRAPPC12-223ENST00000497597 ODF3L2Q3SX64 289 aa7.39□□□□□ -1.23
TRAPPC12-223ENST00000497597 C3orf84H3BNL1 204 aa7.39□□□□□ -1.23
TRAPPC12-223ENST00000497597 NANOS2P60321 138 aaKnown RBP7.39□□□□□ -1.23
TRAPPC12-223ENST00000497597 DEFB4AO15263 64 aa7.39□□□□□ -1.23
TRAPPC12-223ENST00000497597 DEFB114Q30KQ6 69 aa7.38□□□□□ -1.23
TRAPPC12-223ENST00000497597 FAM229BQ4G0N7 80 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms