RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 DNAH10Q8IVF4 4471 aa9.38□□□□□ -0.91
SMPD4-219ENST00000491128 PRSS2P07478 247 aa9.37□□□□□ -0.91
SMPD4-219ENST00000491128 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
SMPD4-219ENST00000491128 DNAH1Q9P2D7 4330 aa9.37□□□□□ -0.91
SMPD4-219ENST00000491128 DYNC2H1Q8NCM8 4307 aaKnown RBP9.37□□□□□ -0.91
SMPD4-219ENST00000491128 MALP21145 153 aa9.37□□□□□ -0.91
SMPD4-219ENST00000491128 NHP2Q9NX24 153 aaKnown RBP9.37□□□□□ -0.91
SMPD4-219ENST00000491128 COX7A2LO14548 114 aa9.36□□□□□ -0.91
SMPD4-219ENST00000491128 C6orf223Q8N319 242 aa9.36□□□□□ -0.91
SMPD4-219ENST00000491128 FABP2P12104 132 aa9.35□□□□□ -0.91
SMPD4-219ENST00000491128 C6orf226Q5I0X4 101 aa9.35□□□□□ -0.91
SMPD4-219ENST00000491128 LITAFQ99732 161 aa9.35□□□□□ -0.91
SMPD4-219ENST00000491128 NDUFA1O15239 70 aa9.35□□□□□ -0.91
SMPD4-219ENST00000491128 LINC01556Q5JQF7 62 aa9.35□□□□□ -0.91
SMPD4-219ENST00000491128 APLNQ9ULZ1 77 aa9.35□□□□□ -0.91
SMPD4-219ENST00000491128 IGKV2D-24A0A075B6R9 120 aa9.34□□□□□ -0.91
SMPD4-219ENST00000491128 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
SMPD4-219ENST00000491128 MEIG1Q5JSS6 88 aa9.34□□□□□ -0.91
SMPD4-219ENST00000491128 A0A1B0GV72 72 aa9.34□□□□□ -0.91
SMPD4-219ENST00000491128 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
SMPD4-219ENST00000491128 MUSTN1Q8IVN3 82 aa9.34□□□□□ -0.91
SMPD4-219ENST00000491128 PFN2P35080 140 aa9.33□□□□□ -0.92
SMPD4-219ENST00000491128 SIGMAR1Q99720 223 aa9.33□□□□□ -0.92
SMPD4-219ENST00000491128 TM2D2Q9BX73 214 aa9.33□□□□□ -0.92
SMPD4-219ENST00000491128 DNAH10OSP0CZ25 163 aa9.32□□□□□ -0.92
SMPD4-219ENST00000491128 HIGD2BQ4VC39 106 aa9.32□□□□□ -0.92
SMPD4-219ENST00000491128 C9orf116Q5BN46 136 aaPredicted RBP9.32□□□□□ -0.92
SMPD4-219ENST00000491128 APOMO95445 188 aa9.32□□□□□ -0.92
SMPD4-219ENST00000491128 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
SMPD4-219ENST00000491128 UBE2DNLQ8IWF7 75 aa9.32□□□□□ -0.92
SMPD4-219ENST00000491128 KRTAP1-5Q9BYS1 174 aa9.31□□□□□ -0.92
SMPD4-219ENST00000491128 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
SMPD4-219ENST00000491128 MIAQ16674 131 aa9.3□□□□□ -0.92
SMPD4-219ENST00000491128 KRTAP26-1Q6PEX3 210 aa9.3□□□□□ -0.92
SMPD4-219ENST00000491128 KMT2AQ03164 3969 aa9.3□□□□□ -0.92
SMPD4-219ENST00000491128 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
SMPD4-219ENST00000491128 SFTA2Q6UW10 78 aa9.3□□□□□ -0.92
SMPD4-219ENST00000491128 KLK5Q9Y337 293 aaPredicted RBP9.3□□□□□ -0.92
SMPD4-219ENST00000491128 A4D1N5 150 aa9.29□□□□□ -0.92
SMPD4-219ENST00000491128 LECT2O14960 151 aa9.29□□□□□ -0.92
SMPD4-219ENST00000491128 C1orf43Q9BWL3 253 aa9.29□□□□□ -0.92
SMPD4-219ENST00000491128 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
SMPD4-219ENST00000491128 CKS1BP61024 79 aa9.29□□□□□ -0.92
SMPD4-219ENST00000491128 WFDC2Q14508 124 aa9.29□□□□□ -0.92
SMPD4-219ENST00000491128 TAL2Q16559 108 aa9.29□□□□□ -0.92
SMPD4-219ENST00000491128 SPAG11BQ08648 103 aa9.28□□□□□ -0.92
SMPD4-219ENST00000491128 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
SMPD4-219ENST00000491128 TRAV8-4A0A0B4J246 113 aa9.28□□□□□ -0.92
SMPD4-219ENST00000491128 LINC00158P58513 81 aa9.28□□□□□ -0.92
SMPD4-219ENST00000491128 SOSTDC1Q6X4U4 206 aa9.28□□□□□ -0.92
SMPD4-219ENST00000491128 CFAP161Q6P656 301 aa9.27□□□□□ -0.92
SMPD4-219ENST00000491128 Q8IZM0 81 aa9.27□□□□□ -0.93
SMPD4-219ENST00000491128 MIR7-3HGQ8N6C7 128 aa9.27□□□□□ -0.93
SMPD4-219ENST00000491128 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
SMPD4-219ENST00000491128 H7C2G1 150 aa9.26□□□□□ -0.93
SMPD4-219ENST00000491128 CFC1BP0CG36 223 aa9.26□□□□□ -0.93
SMPD4-219ENST00000491128 CFC1P0CG37 223 aa9.26□□□□□ -0.93
SMPD4-219ENST00000491128 CIRBPQ14011 172 aaKnown RBP9.26□□□□□ -0.93
SMPD4-219ENST00000491128 F8W1H4 67 aa9.25□□□□□ -0.93
SMPD4-219ENST00000491128 IBA57-AS1B1ANH7 110 aa9.25□□□□□ -0.93
SMPD4-219ENST00000491128 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
SMPD4-219ENST00000491128 M0R2N4 97 aa9.24□□□□□ -0.93
SMPD4-219ENST00000491128 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
SMPD4-219ENST00000491128 LINC00308Q8TCZ7 52 aa9.24□□□□□ -0.93
SMPD4-219ENST00000491128 J3QR89 54 aa9.24□□□□□ -0.93
SMPD4-219ENST00000491128 HERV-K104P63124 156 aa9.24□□□□□ -0.93
SMPD4-219ENST00000491128 SPANXDQ9BXN6 97 aa9.24□□□□□ -0.93
SMPD4-219ENST00000491128 SPANXCQ9NY87 97 aa9.24□□□□□ -0.93
SMPD4-219ENST00000491128 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
SMPD4-219ENST00000491128 H3BMG7 143 aa9.23□□□□□ -0.93
SMPD4-219ENST00000491128 ETDBQ3ZM63 59 aa9.23□□□□□ -0.93
SMPD4-219ENST00000491128 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
SMPD4-219ENST00000491128 ZNF561-AS1K7EIQ3 104 aa9.22□□□□□ -0.93
SMPD4-219ENST00000491128 MTURNQ8N3F0 131 aa9.22□□□□□ -0.93
SMPD4-219ENST00000491128 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
SMPD4-219ENST00000491128 A6NJY4 79 aa9.21□□□□□ -0.94
SMPD4-219ENST00000491128 TIMM17BO60830 172 aa9.21□□□□□ -0.94
SMPD4-219ENST00000491128 LINC01561Q8N1V8 128 aa9.21□□□□□ -0.94
SMPD4-219ENST00000491128 VPS13DQ5THJ4 4388 aa9.2□□□□□ -0.94
SMPD4-219ENST00000491128 PRR3P79522 188 aaKnown RBP9.19□□□□□ -0.94
SMPD4-219ENST00000491128 NTN5Q8WTR8 489 aaPredicted RBP9.19□□□□□ -0.94
SMPD4-219ENST00000491128 CAMK2N2Q96S95 79 aa9.19□□□□□ -0.94
SMPD4-219ENST00000491128 C6orf48Q9UBA6 75 aa9.19□□□□□ -0.94
SMPD4-219ENST00000491128 A0A1B0GWB2 263 aa9.19□□□□□ -0.94
SMPD4-219ENST00000491128 Q6ZRU5 148 aa9.19□□□□□ -0.94
SMPD4-219ENST00000491128 MUC7Q8TAX7 377 aa9.19□□□□□ -0.94
SMPD4-219ENST00000491128 USP17L23D6RBM5 183 aa9.18□□□□□ -0.94
SMPD4-219ENST00000491128 TSPAN13O95857 204 aa9.18□□□□□ -0.94
SMPD4-219ENST00000491128 XAGE1AQ9HD64 81 aa9.17□□□□□ -0.94
SMPD4-219ENST00000491128 PRO1854Q9UHT4 67 aa9.17□□□□□ -0.94
SMPD4-219ENST00000491128 SLPIP03973 132 aa9.17□□□□□ -0.94
SMPD4-219ENST00000491128 Q8NDZ9 215 aa9.16□□□□□ -0.94
SMPD4-219ENST00000491128 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
SMPD4-219ENST00000491128 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
SMPD4-219ENST00000491128 IFITM1P13164 125 aa9.16□□□□□ -0.94
SMPD4-219ENST00000491128 CXCL5P42830 114 aa9.16□□□□□ -0.94
SMPD4-219ENST00000491128 Q1RN00 199 aa9.16□□□□□ -0.94
SMPD4-219ENST00000491128 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
SMPD4-219ENST00000491128 DNAH2Q9P225 4427 aa9.15□□□□□ -0.94
SMPD4-219ENST00000491128 PSCAO43653 123 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms