RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 NCR2O95944 276 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 CRIP1P50238 77 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 ZNF138P52744 262 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 CRYBA4P53673 196 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 RPL32P62910 135 aaKnown RBP4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 DEFB104AQ8WTQ1 72 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 SPANXB1Q9NS25 103 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 PRO0255Q9UI72 69 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 CYSLTR1Q9Y271 337 aa4.29□□□□□ -1.72
TMEM39A-209ENST00000486235 TRGV4A0A0C4DH28 118 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 LOC389332A0A1B0GUA5 103 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 NPYP01303 97 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 RNASE4P34096 147 aaKnown RBP4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 HERVK_113P61574 105 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 ERCC8Q13216 396 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 ZC2HC1BQ5TFG8 222 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 Q8N814 137 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 ODF3Q96PU9 254 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 HIST1H4GQ99525 98 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 Q9HAA7 133 aa4.28□□□□□ -1.72
TMEM39A-209ENST00000486235 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.73
TMEM39A-209ENST00000486235 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 K7EQD1 137 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 M0R3E3 92 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 SNAI2O43623 268 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 ORM1P02763 201 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 TMEM78Q5T7P6 136 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 Q6ZQT7 251 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 PCP2Q8IVA1 136 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 RAB37Q96AX2 223 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 RNF185Q96GF1 192 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 TP73-AS1Q9UF72 201 aa4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-209ENST00000486235 KLLNB2CW77 178 aa4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 RPL13AP40429 203 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 ASIPP42127 132 aa4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 FXYD2P54710 66 aa4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 SMAGPQ0VAQ4 97 aa4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 WFDC2Q14508 124 aa4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 PRR9Q5T870 116 aa4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 TOMM6Q96B49 74 aa4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 SMIM2Q9BVW6 85 aa4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
TMEM39A-209ENST00000486235 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 TRBV7-3A0A075B6L6 115 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 IGHV1OR15-1A0A075B7D0 117 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 IGKV2-40A0A087WW87 121 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 IGHV3-38A0A0C4DH36 116 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 LOC100131303A0A0U1RQF7 123 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 LECT2O14960 151 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 APOMO95445 188 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 IGKV2D-40P01614 121 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 SPANXN1Q5VSR9 72 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 Q6ZSA8 131 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 SCXQ7RTU7 201 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 ZFAND2AQ8N6M9 145 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 PPDPFLQ8WWR9 84 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 TMEM141Q96I45 108 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 FAM19A4Q96LR4 140 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 C2orf48Q96LS8 159 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 LINC00477Q96M19 166 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 LINC01600Q96MT4 127 aa4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 MRPL35Q9NZE8 188 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-209ENST00000486235 TRAV21A0A0B4J279 112 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 IBA57-AS1B1ANH7 110 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 OXTP01178 125 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 IGHV3-30P01768 117 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 IGHV3-33P01772 117 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 IGHV3-30-3P0DP02 117 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 IGHV3-30-5P0DP03 117 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 UBE2D1P51668 147 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 CKS1BP61024 79 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 UBE2D3P61077 147 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 UBE2D2P62837 147 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 CFAP126Q5VTH2 177 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 SCGB3A1Q96QR1 104 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 DPH3P1Q9H4G8 78 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 SPANXCQ9NY87 97 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 PRO0461Q9UI25 63 aa4.24□□□□□ -1.73
TMEM39A-209ENST00000486235 TMSB15BA0A087X1C1 80 aa4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 IGHV3-16A0A0C4DH30 117 aa4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 KRTAP10-4P60372 401 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 LINC01556Q5JQF7 62 aa4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 Q6Q795 121 aa4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 Q8TAT8 98 aa4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 TIMM17AQ99595 171 aa4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 KRTAP4-4Q9BYR3 166 aa4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 GTSF1LQ9H1H1 148 aa4.23□□□□□ -1.73
TMEM39A-209ENST00000486235 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-209ENST00000486235 C11orf86A6NJI1 115 aa4.22□□□□□ -1.73
TMEM39A-209ENST00000486235 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
TMEM39A-209ENST00000486235 A8MWV9 139 aa4.22□□□□□ -1.73
TMEM39A-209ENST00000486235 RS1O15537 224 aa4.22□□□□□ -1.73
TMEM39A-209ENST00000486235 TSHBP01222 138 aa4.22□□□□□ -1.73
TMEM39A-209ENST00000486235 ETDBQ3ZM63 59 aa4.22□□□□□ -1.73
TMEM39A-209ENST00000486235 SCGB1D4Q6XE38 83 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms