RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
CCM2-215ENST00000482714 CARD19Q96LW7 228 aa9.94□□□□□ -0.82
CCM2-215ENST00000482714 PKHD1P08F94 4074 aa9.94□□□□□ -0.82
CCM2-215ENST00000482714 TRBV30A0A0K0K1B3 111 aa9.93□□□□□ -0.82
CCM2-215ENST00000482714 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
CCM2-215ENST00000482714 TMA7Q9Y2S6 64 aaKnown RBP9.93□□□□□ -0.82
CCM2-215ENST00000482714 DYNC1H1Q14204 4646 aaKnown RBP9.93□□□□□ -0.82
CCM2-215ENST00000482714 C16orf90A8MZG2 172 aa9.92□□□□□ -0.82
CCM2-215ENST00000482714 Q6ZRU5 148 aa9.92□□□□□ -0.82
CCM2-215ENST00000482714 UNQ6190/PRO20217Q6UXQ8 127 aa9.91□□□□□ -0.82
CCM2-215ENST00000482714 PLEKHB2Q96CS7 222 aa9.91□□□□□ -0.82
CCM2-215ENST00000482714 LEPROTO15243 131 aa9.91□□□□□ -0.82
CCM2-215ENST00000482714 SDIM1Q6ZPB5 146 aa9.91□□□□□ -0.82
CCM2-215ENST00000482714 E9PLD3 99 aa9.9□□□□□ -0.83
CCM2-215ENST00000482714 HERC2O95714 4834 aa9.9□□□□□ -0.83
CCM2-215ENST00000482714 TLX1NBP0CAT3 122 aa9.89□□□□□ -0.83
CCM2-215ENST00000482714 C2orf82Q6UX34 121 aa9.89□□□□□ -0.83
CCM2-215ENST00000482714 DNAH8Q96JB1 4490 aa9.88□□□□□ -0.83
CCM2-215ENST00000482714 LOC107984640A0A0U1RRK4 108 aa9.88□□□□□ -0.83
CCM2-215ENST00000482714 NMUP48645 174 aa9.88□□□□□ -0.83
CCM2-215ENST00000482714 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
CCM2-215ENST00000482714 C6orf48Q9UBA6 75 aa9.88□□□□□ -0.83
CCM2-215ENST00000482714 LRP1BQ9NZR2 4599 aa9.88□□□□□ -0.83
CCM2-215ENST00000482714 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
CCM2-215ENST00000482714 LINC00587B1AMM8 73 aa9.87□□□□□ -0.83
CCM2-215ENST00000482714 SCGB1D1O95968 90 aa9.87□□□□□ -0.83
CCM2-215ENST00000482714 FUSP35637 526 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCM2-215ENST00000482714 HERV-K104P63124 156 aa9.87□□□□□ -0.83
CCM2-215ENST00000482714 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
CCM2-215ENST00000482714 MYMXA0A1B0GTQ4 84 aa9.86□□□□□ -0.83
CCM2-215ENST00000482714 J3QQQ9 107 aa9.86□□□□□ -0.83
CCM2-215ENST00000482714 KRTAP10-1P60331 282 aa9.86□□□□□ -0.83
CCM2-215ENST00000482714 COX17Q14061 63 aa9.86□□□□□ -0.83
CCM2-215ENST00000482714 JOSD1Q15040 202 aaPredicted RBP9.86□□□□□ -0.83
CCM2-215ENST00000482714 STPG4Q8N801 248 aa9.86□□□□□ -0.83
CCM2-215ENST00000482714 ZNF625Q96I27 306 aaPredicted RBP9.85□□□□□ -0.83
CCM2-215ENST00000482714 HSBP1L1C9JCN9 74 aa9.85□□□□□ -0.83
CCM2-215ENST00000482714 NDUFC2-KCTD14E9PQ53 114 aa9.85□□□□□ -0.83
CCM2-215ENST00000482714 LGALS3P17931 250 aaKnown RBP9.85□□□□□ -0.83
CCM2-215ENST00000482714 NDUFA12Q9UI09 145 aa9.85□□□□□ -0.83
CCM2-215ENST00000482714 Q6ZSA8 131 aa9.84□□□□□ -0.83
CCM2-215ENST00000482714 CIRBPQ14011 172 aaKnown RBP9.83□□□□□ -0.84
CCM2-215ENST00000482714 LINC01620Q4KN68 170 aa9.83□□□□□ -0.84
CCM2-215ENST00000482714 PTTG1IPP53801 180 aa9.81□□□□□ -0.84
CCM2-215ENST00000482714 ATOH7Q8N100 152 aa9.81□□□□□ -0.84
CCM2-215ENST00000482714 C9orf116Q5BN46 136 aaPredicted RBP9.8□□□□□ -0.84
CCM2-215ENST00000482714 Q6ZRP5 223 aa9.8□□□□□ -0.84
CCM2-215ENST00000482714 ERG28Q9UKR5 140 aa9.8□□□□□ -0.84
CCM2-215ENST00000482714 CDK2AP2O75956 126 aa9.79□□□□□ -0.84
CCM2-215ENST00000482714 TSPEAR-AS2P59090 65 aa9.79□□□□□ -0.84
CCM2-215ENST00000482714 A0A096LNI7 61 aa9.79□□□□□ -0.84
CCM2-215ENST00000482714 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
CCM2-215ENST00000482714 ANKRD39Q53RE8 183 aa9.79□□□□□ -0.84
CCM2-215ENST00000482714 DPH3Q96FX2 82 aa9.79□□□□□ -0.84
CCM2-215ENST00000482714 IGKV2D-26A0A0A0MRZ7 120 aa9.78□□□□□ -0.84
CCM2-215ENST00000482714 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
CCM2-215ENST00000482714 SPACA4Q8TDM5 124 aa9.78□□□□□ -0.84
CCM2-215ENST00000482714 FAM30AQ9NZY2 134 aa9.78□□□□□ -0.84
CCM2-215ENST00000482714 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
CCM2-215ENST00000482714 PFN2P35080 140 aa9.76□□□□□ -0.85
CCM2-215ENST00000482714 LINC00158P58513 81 aa9.76□□□□□ -0.85
CCM2-215ENST00000482714 MAJINQ3KP22 176 aa9.76□□□□□ -0.85
CCM2-215ENST00000482714 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
CCM2-215ENST00000482714 PYY3Q5JQD4 70 aa9.76□□□□□ -0.85
CCM2-215ENST00000482714 MEIG1Q5JSS6 88 aa9.76□□□□□ -0.85
CCM2-215ENST00000482714 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
CCM2-215ENST00000482714 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.76□□□□□ -0.85
CCM2-215ENST00000482714 RYR1P21817 5038 aa9.75□□□□□ -0.85
CCM2-215ENST00000482714 ZNF815PA8K554 130 aa9.75□□□□□ -0.85
CCM2-215ENST00000482714 EPM2AB3EWF7 344 aa9.75□□□□□ -0.85
CCM2-215ENST00000482714 PLAC8Q9NZF1 115 aa9.75□□□□□ -0.85
CCM2-215ENST00000482714 A0A0J9YXY3 114 aa9.74□□□□□ -0.85
CCM2-215ENST00000482714 TIMM17BO60830 172 aa9.74□□□□□ -0.85
CCM2-215ENST00000482714 XGP55808 180 aa9.74□□□□□ -0.85
CCM2-215ENST00000482714 APOBP04114 4563 aaKnown RBP9.74□□□□□ -0.85
CCM2-215ENST00000482714 A0A087WYN8 130 aa9.73□□□□□ -0.85
CCM2-215ENST00000482714 CHTF8P0CG12 524 aa9.73□□□□□ -0.85
CCM2-215ENST00000482714 SMIM13P0DJ93 91 aa9.73□□□□□ -0.85
CCM2-215ENST00000482714 VAMP8Q9BV40 100 aa9.73□□□□□ -0.85
CCM2-215ENST00000482714 PLA2G2DQ9UNK4 145 aa9.73□□□□□ -0.85
CCM2-215ENST00000482714 PANO1I0J062 215 aa9.72□□□□□ -0.85
CCM2-215ENST00000482714 CIRBP-AS1Q8TBR5 109 aa9.72□□□□□ -0.85
CCM2-215ENST00000482714 SND1-IT1Q9HBX3 110 aa9.72□□□□□ -0.85
CCM2-215ENST00000482714 LOC107984156A0A0G2JMH3 177 aa9.71□□□□□ -0.86
CCM2-215ENST00000482714 DLEU1O43261 78 aa9.71□□□□□ -0.86
CCM2-215ENST00000482714 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
CCM2-215ENST00000482714 SCXQ7RTU7 201 aa9.71□□□□□ -0.86
CCM2-215ENST00000482714 PCP2Q8IVA1 136 aa9.71□□□□□ -0.86
CCM2-215ENST00000482714 ARL17AQ8IVW1 177 aa9.71□□□□□ -0.86
CCM2-215ENST00000482714 COX8AP10176 69 aa9.7□□□□□ -0.86
CCM2-215ENST00000482714 Q6ZVH6 145 aa9.7□□□□□ -0.86
CCM2-215ENST00000482714 MIR7-3HGQ8N6C7 128 aa9.7□□□□□ -0.86
CCM2-215ENST00000482714 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
CCM2-215ENST00000482714 HSPG2P98160 4391 aa9.69□□□□□ -0.86
CCM2-215ENST00000482714 S100A12P80511 92 aa9.69□□□□□ -0.86
CCM2-215ENST00000482714 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
CCM2-215ENST00000482714 SPATA45Q537H7 98 aa9.69□□□□□ -0.86
CCM2-215ENST00000482714 SCGB1D4Q6XE38 83 aa9.69□□□□□ -0.86
CCM2-215ENST00000482714 BOD1L2Q8IYS8 172 aa9.69□□□□□ -0.86
CCM2-215ENST00000482714 TTTY13Q9BZ97 58 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms