RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 HINT1P49773 126 aaPredicted RBP7.43□□□□□ -1.22
APTX-223ENST00000479656 CKS1BP61024 79 aa7.43□□□□□ -1.22
APTX-223ENST00000479656 SPAG11BQ08648 103 aa7.43□□□□□ -1.22
APTX-223ENST00000479656 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
APTX-223ENST00000479656 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
APTX-223ENST00000479656 HERV-K104P63124 156 aa7.43□□□□□ -1.22
APTX-223ENST00000479656 C15orf56Q8N910 161 aa7.43□□□□□ -1.22
APTX-223ENST00000479656 HIST1H4GQ99525 98 aa7.43□□□□□ -1.22
APTX-223ENST00000479656 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
APTX-223ENST00000479656 SRSF9Q13242 221 aaKnown RBP eCLIP7.42□□□□□ -1.22
APTX-223ENST00000479656 ADAMTSL4-AS1Q5T5F5 129 aa7.42□□□□□ -1.22
APTX-223ENST00000479656 TM2D2Q9BX73 214 aa7.42□□□□□ -1.22
APTX-223ENST00000479656 COX11Q9Y6N1 276 aa7.42□□□□□ -1.22
APTX-223ENST00000479656 VPS13DQ5THJ4 4388 aa7.42□□□□□ -1.22
APTX-223ENST00000479656 ZNF561-AS1K7EIQ3 104 aa7.41□□□□□ -1.22
APTX-223ENST00000479656 HSD52Q0P140 79 aa7.41□□□□□ -1.22
APTX-223ENST00000479656 BATFQ16520 125 aa7.41□□□□□ -1.22
APTX-223ENST00000479656 MEIG1Q5JSS6 88 aa7.41□□□□□ -1.22
APTX-223ENST00000479656 NTN5Q8WTR8 489 aaPredicted RBP7.41□□□□□ -1.22
APTX-223ENST00000479656 LITAFQ99732 161 aa7.41□□□□□ -1.22
APTX-223ENST00000479656 TMEM238C9JI98 176 aa7.41□□□□□ -1.22
APTX-223ENST00000479656 CIRBPQ14011 172 aaKnown RBP7.41□□□□□ -1.22
APTX-223ENST00000479656 UNQ6190/PRO20217Q6UXQ8 127 aa7.41□□□□□ -1.22
APTX-223ENST00000479656 SPANXB1Q9NS25 103 aaPredicted RBP7.41□□□□□ -1.22
APTX-223ENST00000479656 LECT2O14960 151 aa7.4□□□□□ -1.23
APTX-223ENST00000479656 SMIM13P0DJ93 91 aa7.4□□□□□ -1.23
APTX-223ENST00000479656 GCSHP23434 173 aa7.4□□□□□ -1.23
APTX-223ENST00000479656 CXCL5P42830 114 aa7.4□□□□□ -1.23
APTX-223ENST00000479656 BVES-AS1Q5T3Y7 98 aa7.4□□□□□ -1.23
APTX-223ENST00000479656 C10orf25Q5T742 122 aa7.4□□□□□ -1.23
APTX-223ENST00000479656 DAND5Q8N907 189 aa7.4□□□□□ -1.23
APTX-223ENST00000479656 LINC00476Q8WZB0 136 aa7.4□□□□□ -1.23
APTX-223ENST00000479656 USP17L23D6RBM5 183 aa7.39□□□□□ -1.23
APTX-223ENST00000479656 PSCAO43653 123 aa7.39□□□□□ -1.23
APTX-223ENST00000479656 TIMM17BO60830 172 aa7.39□□□□□ -1.23
APTX-223ENST00000479656 TAL2Q16559 108 aa7.39□□□□□ -1.23
APTX-223ENST00000479656 SFTA2Q6UW10 78 aa7.39□□□□□ -1.23
APTX-223ENST00000479656 CEND1Q8N111 149 aa7.39□□□□□ -1.23
APTX-223ENST00000479656 PFN2P35080 140 aa7.38□□□□□ -1.23
APTX-223ENST00000479656 C9orf116Q5BN46 136 aaPredicted RBP7.38□□□□□ -1.23
APTX-223ENST00000479656 GVQW2A0A096LPI5 108 aaPredicted RBP7.38□□□□□ -1.23
APTX-223ENST00000479656 LINC00158P58513 81 aa7.38□□□□□ -1.23
APTX-223ENST00000479656 NPC2P61916 151 aa7.38□□□□□ -1.23
APTX-223ENST00000479656 Q6ZR54 194 aa7.38□□□□□ -1.23
APTX-223ENST00000479656 MUSTN1Q8IVN3 82 aa7.38□□□□□ -1.23
APTX-223ENST00000479656 CAMK2N2Q96S95 79 aa7.38□□□□□ -1.23
APTX-223ENST00000479656 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
APTX-223ENST00000479656 FXYD2P54710 66 aa7.37□□□□□ -1.23
APTX-223ENST00000479656 WFDC2Q14508 124 aa7.37□□□□□ -1.23
APTX-223ENST00000479656 SPANXDQ9BXN6 97 aa7.37□□□□□ -1.23
APTX-223ENST00000479656 SPANXCQ9NY87 97 aa7.37□□□□□ -1.23
APTX-223ENST00000479656 PTTG1IPP53801 180 aa7.36□□□□□ -1.23
APTX-223ENST00000479656 Q6ZRN7 208 aaPredicted RBP7.36□□□□□ -1.23
APTX-223ENST00000479656 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
APTX-223ENST00000479656 EIF4EBP3O60516 100 aaPredicted RBP7.36□□□□□ -1.23
APTX-223ENST00000479656 Q6ZRU5 148 aa7.36□□□□□ -1.23
APTX-223ENST00000479656 MIR7-3HGQ8N6C7 128 aa7.36□□□□□ -1.23
APTX-223ENST00000479656 C6orf48Q9UBA6 75 aa7.36□□□□□ -1.23
APTX-223ENST00000479656 SLPIP03973 132 aa7.35□□□□□ -1.23
APTX-223ENST00000479656 Q6ZVH6 145 aa7.35□□□□□ -1.23
APTX-223ENST00000479656 SYCNQ0VAF6 134 aa7.34□□□□□ -1.23
APTX-223ENST00000479656 LINC00308Q8TCZ7 52 aa7.34□□□□□ -1.23
APTX-223ENST00000479656 DNAH10Q8IVF4 4471 aa7.34□□□□□ -1.23
APTX-223ENST00000479656 COX17Q14061 63 aa7.34□□□□□ -1.23
APTX-223ENST00000479656 SOSTDC1Q6X4U4 206 aa7.34□□□□□ -1.23
APTX-223ENST00000479656 TRBV30A0A0K0K1B3 111 aa7.33□□□□□ -1.24
APTX-223ENST00000479656 F8WDY8 70 aa7.33□□□□□ -1.24
APTX-223ENST00000479656 IFITM1P13164 125 aa7.33□□□□□ -1.24
APTX-223ENST00000479656 A4D1N5 150 aa7.32□□□□□ -1.24
APTX-223ENST00000479656 LRCOL1A6NCL2 159 aa7.32□□□□□ -1.24
APTX-223ENST00000479656 RPL24P83731 157 aaKnown RBP7.32□□□□□ -1.24
APTX-223ENST00000479656 COL5A1-AS1Q5SY13 56 aa7.32□□□□□ -1.24
APTX-223ENST00000479656 NHP2Q9NX24 153 aaKnown RBP7.32□□□□□ -1.24
APTX-223ENST00000479656 C1orf134Q5TEV5 83 aa7.32□□□□□ -1.24
APTX-223ENST00000479656 CARD19Q96LW7 228 aa7.31□□□□□ -1.24
APTX-223ENST00000479656 KMT2AQ03164 3969 aa7.31□□□□□ -1.24
APTX-223ENST00000479656 A6NDN8 102 aa7.3□□□□□ -1.24
APTX-223ENST00000479656 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.3□□□□□ -1.24
APTX-223ENST00000479656 K7ERJ3 54 aa7.3□□□□□ -1.24
APTX-223ENST00000479656 CFC1BP0CG36 223 aa7.3□□□□□ -1.24
APTX-223ENST00000479656 CFC1P0CG37 223 aa7.3□□□□□ -1.24
APTX-223ENST00000479656 C14orf177Q52M58 125 aa7.3□□□□□ -1.24
APTX-223ENST00000479656 SND1-IT1Q9HBX3 110 aa7.3□□□□□ -1.24
APTX-223ENST00000479656 COPS9Q8WXC6 57 aa7.29□□□□□ -1.24
APTX-223ENST00000479656 RAB37Q96AX2 223 aa7.29□□□□□ -1.24
APTX-223ENST00000479656 UBE2V1Q13404 147 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 RNF151Q2KHN1 245 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 A0A087WTM6 91 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.28□□□□□ -1.24
APTX-223ENST00000479656 A0A1B0GWB2 263 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 GAGE2EQ4V326 116 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 Q6ZRP5 223 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 VPS25Q9BRG1 176 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 XAGE1AQ9HD64 81 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 GAGE2DQ9UEU5 116 aa7.28□□□□□ -1.24
APTX-223ENST00000479656 ALMS1Q8TCU4 4167 aa7.27□□□□□ -1.24
APTX-223ENST00000479656 LOC107984156A0A0G2JMH3 177 aa7.27□□□□□ -1.25
APTX-223ENST00000479656 TAX1BP3O14907 124 aa7.27□□□□□ -1.25
APTX-223ENST00000479656 CNBPP62633 177 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms