RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 SVBPQ8N300 66 aa6.83□□□□□ -1.32
HDLBP-236ENST00000477477 AMELXQ99217 191 aa6.83□□□□□ -1.32
HDLBP-236ENST00000477477 PRSS2P07478 247 aa6.82□□□□□ -1.32
HDLBP-236ENST00000477477 RAB5BP61020 215 aa6.82□□□□□ -1.32
HDLBP-236ENST00000477477 Q8N8P6 123 aa6.82□□□□□ -1.32
HDLBP-236ENST00000477477 NPSP0C0P6 89 aa6.81□□□□□ -1.32
HDLBP-236ENST00000477477 VCX2Q9H322 139 aa6.81□□□□□ -1.32
HDLBP-236ENST00000477477 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
HDLBP-236ENST00000477477 IGIPA6NJ69 53 aa6.8□□□□□ -1.32
HDLBP-236ENST00000477477 RPL13AP40429 203 aaKnown RBP6.8□□□□□ -1.32
HDLBP-236ENST00000477477 CKS1BP61024 79 aa6.8□□□□□ -1.32
HDLBP-236ENST00000477477 PNRC1Q12796 327 aaPredicted RBP6.8□□□□□ -1.32
HDLBP-236ENST00000477477 ORMDL2Q53FV1 153 aa6.8□□□□□ -1.32
HDLBP-236ENST00000477477 ANKRD39Q53RE8 183 aa6.8□□□□□ -1.32
HDLBP-236ENST00000477477 FAM19A3Q7Z5A8 133 aa6.8□□□□□ -1.32
HDLBP-236ENST00000477477 Q8IZM0 81 aa6.8□□□□□ -1.32
HDLBP-236ENST00000477477 K7EMI3 77 aa6.79□□□□□ -1.32
HDLBP-236ENST00000477477 ZNF861PO60384 105 aa6.79□□□□□ -1.32
HDLBP-236ENST00000477477 SCO1O75880 301 aa6.79□□□□□ -1.32
HDLBP-236ENST00000477477 MT-ND4LP03901 98 aa6.79□□□□□ -1.32
HDLBP-236ENST00000477477 C6orf226Q5I0X4 101 aa6.79□□□□□ -1.32
HDLBP-236ENST00000477477 ANAPC16Q96DE5 110 aa6.79□□□□□ -1.32
HDLBP-236ENST00000477477 ALKBH7Q9BT30 221 aaPredicted RBP6.79□□□□□ -1.32
HDLBP-236ENST00000477477 CARHSP1Q9Y2V2 147 aaKnown RBP6.79□□□□□ -1.32
HDLBP-236ENST00000477477 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
HDLBP-236ENST00000477477 NUPR1O60356 82 aa6.78□□□□□ -1.32
HDLBP-236ENST00000477477 HERVK_113P63121 156 aa6.78□□□□□ -1.32
HDLBP-236ENST00000477477 SEC11AP67812 179 aa6.78□□□□□ -1.32
HDLBP-236ENST00000477477 XAGE1AQ9HD64 81 aa6.78□□□□□ -1.32
HDLBP-236ENST00000477477 NXT2Q9NPJ8 142 aaKnown RBP6.78□□□□□ -1.32
HDLBP-236ENST00000477477 F8VRH5 84 aa6.77□□□□□ -1.33
HDLBP-236ENST00000477477 PAPPA-AS1Q5QFB9 102 aa6.77□□□□□ -1.33
HDLBP-236ENST00000477477 TIMM17AQ99595 171 aa6.77□□□□□ -1.33
HDLBP-236ENST00000477477 CDKN2A-AS1Q9UH64 79 aa6.77□□□□□ -1.33
HDLBP-236ENST00000477477 TMEM218A2RU14 115 aa6.76□□□□□ -1.33
HDLBP-236ENST00000477477 CXCL5P42830 114 aa6.76□□□□□ -1.33
HDLBP-236ENST00000477477 PRR4Q16378 134 aa6.76□□□□□ -1.33
HDLBP-236ENST00000477477 CTDSP1Q9GZU7 261 aa6.76□□□□□ -1.33
HDLBP-236ENST00000477477 GEMIN7Q9H840 131 aaKnown RBP6.76□□□□□ -1.33
HDLBP-236ENST00000477477 TP73-AS1Q9UF72 201 aa6.76□□□□□ -1.33
HDLBP-236ENST00000477477 APOC3P02656 99 aa6.75□□□□□ -1.33
HDLBP-236ENST00000477477 G0S2P27469 103 aa6.75□□□□□ -1.33
HDLBP-236ENST00000477477 MRPL55Q7Z7F7 128 aaKnown RBP6.75□□□□□ -1.33
HDLBP-236ENST00000477477 TOMM6Q96B49 74 aa6.75□□□□□ -1.33
HDLBP-236ENST00000477477 LINC00587B1AMM8 73 aa6.74□□□□□ -1.33
HDLBP-236ENST00000477477 SMIM1B2RUZ4 78 aa6.73□□□□□ -1.33
HDLBP-236ENST00000477477 BCE1O60756 84 aa6.73□□□□□ -1.33
HDLBP-236ENST00000477477 RPL28P46779 137 aaKnown RBP6.73□□□□□ -1.33
HDLBP-236ENST00000477477 MUC2Q02817 5179 aa6.72□□□□□ -1.33
HDLBP-236ENST00000477477 A0A087X002 238 aa6.72□□□□□ -1.33
HDLBP-236ENST00000477477 TSTD3H0UI37 97 aa6.72□□□□□ -1.33
HDLBP-236ENST00000477477 KIAA1644Q3SXP7 199 aa6.72□□□□□ -1.33
HDLBP-236ENST00000477477 ERASQ7Z444 233 aa6.72□□□□□ -1.33
HDLBP-236ENST00000477477 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
HDLBP-236ENST00000477477 SCGB3A1Q96QR1 104 aa6.72□□□□□ -1.33
HDLBP-236ENST00000477477 IGLV5-45A0A087WSX0 123 aa6.71□□□□□ -1.34
HDLBP-236ENST00000477477 TINCRA0A1B0GVN0 87 aa6.71□□□□□ -1.34
HDLBP-236ENST00000477477 ADCYAP1P18509 176 aa6.71□□□□□ -1.34
HDLBP-236ENST00000477477 PDZD11Q5EBL8 140 aa6.71□□□□□ -1.34
HDLBP-236ENST00000477477 COX7B2Q8TF08 81 aa6.71□□□□□ -1.34
HDLBP-236ENST00000477477 LINC00167Q96N53 147 aa6.71□□□□□ -1.34
HDLBP-236ENST00000477477 RPL37AP8A6NKH3 93 aa6.7□□□□□ -1.34
HDLBP-236ENST00000477477 TSPAN13O95857 204 aa6.7□□□□□ -1.34
HDLBP-236ENST00000477477 SEC11CQ9BY50 192 aa6.7□□□□□ -1.34
HDLBP-236ENST00000477477 SMCO4Q9NRQ5 59 aa6.7□□□□□ -1.34
HDLBP-236ENST00000477477 IGLV5-37A0A075B6J1 123 aa6.69□□□□□ -1.34
HDLBP-236ENST00000477477 GAGE10A6NGK3 116 aa6.69□□□□□ -1.34
HDLBP-236ENST00000477477 LINC01546A6NGU7 62 aa6.69□□□□□ -1.34
HDLBP-236ENST00000477477 C5orf52A6NGY3 159 aa6.69□□□□□ -1.34
HDLBP-236ENST00000477477 LINC01549A6NIU2 74 aa6.69□□□□□ -1.34
HDLBP-236ENST00000477477 CRYGAP11844 174 aa6.69□□□□□ -1.34
HDLBP-236ENST00000477477 C10orf91Q5T1B1 145 aa6.69□□□□□ -1.34
HDLBP-236ENST00000477477 TYMSOSQ8TAI1 123 aa6.69□□□□□ -1.34
HDLBP-236ENST00000477477 TRAV9-1A0A075B6T8 112 aa6.68□□□□□ -1.34
HDLBP-236ENST00000477477 SPINK8P0C7L1 97 aa6.68□□□□□ -1.34
HDLBP-236ENST00000477477 S100A2P29034 98 aa6.68□□□□□ -1.34
HDLBP-236ENST00000477477 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
HDLBP-236ENST00000477477 CST9LQ9H4G1 147 aa6.68□□□□□ -1.34
HDLBP-236ENST00000477477 NKAPP1Q8N9T2 125 aa6.67□□□□□ -1.34
HDLBP-236ENST00000477477 LINC00614P0C842 121 aa6.66□□□□□ -1.34
HDLBP-236ENST00000477477 UBE2AP49459 152 aa6.66□□□□□ -1.34
HDLBP-236ENST00000477477 PMVKQ15126 192 aa6.66□□□□□ -1.34
HDLBP-236ENST00000477477 GNB1LQ9BYB4 327 aa6.66□□□□□ -1.34
HDLBP-236ENST00000477477 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
HDLBP-236ENST00000477477 ANAPC11Q9NYG5 84 aa6.66□□□□□ -1.34
HDLBP-236ENST00000477477 ATP5LO75964 103 aa6.65□□□□□ -1.34
HDLBP-236ENST00000477477 KRTAP13-2Q52LG2 175 aa6.65□□□□□ -1.34
HDLBP-236ENST00000477477 A0A0U1RQV1 116 aa6.64□□□□□ -1.35
HDLBP-236ENST00000477477 H3BRM9 83 aa6.64□□□□□ -1.35
HDLBP-236ENST00000477477 PCP4P48539 62 aa6.64□□□□□ -1.35
HDLBP-236ENST00000477477 FA2HQ7L5A8 372 aa6.64□□□□□ -1.35
HDLBP-236ENST00000477477 IGKV2-28A0A075B6P5 120 aa6.63□□□□□ -1.35
HDLBP-236ENST00000477477 TMEM238LA0A1B0GVL6 79 aa6.63□□□□□ -1.35
HDLBP-236ENST00000477477 IGKV2D-28P01615 120 aa6.63□□□□□ -1.35
HDLBP-236ENST00000477477 FAM229BQ4G0N7 80 aa6.63□□□□□ -1.35
HDLBP-236ENST00000477477 IGLV5-39A0A0G2JS06 123 aa6.62□□□□□ -1.35
HDLBP-236ENST00000477477 IGLC3P0DOY3 106 aa6.62□□□□□ -1.35
HDLBP-236ENST00000477477 VPREB1P12018 145 aa6.62□□□□□ -1.35
HDLBP-236ENST00000477477 PFN2P35080 140 aa6.62□□□□□ -1.35
HDLBP-236ENST00000477477 SNRPEP62304 92 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms