RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 IFI27P40305 119 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-219ENST00000476625 C10orf91Q5T1B1 145 aa6.92□□□□□ -1.3
HDAC6-219ENST00000476625 MRPL55Q7Z7F7 128 aaKnown RBP6.92□□□□□ -1.3
HDAC6-219ENST00000476625 TMEM141Q96I45 108 aa6.92□□□□□ -1.3
HDAC6-219ENST00000476625 CDIP1Q9H305 208 aa6.92□□□□□ -1.3
HDAC6-219ENST00000476625 LOC389332A0A1B0GUA5 103 aa6.91□□□□□ -1.3
HDAC6-219ENST00000476625 A0A1B0GXF2 115 aa6.91□□□□□ -1.3
HDAC6-219ENST00000476625 LINC00167Q96N53 147 aa6.91□□□□□ -1.3
HDAC6-219ENST00000476625 TRAV9-1A0A075B6T8 112 aa6.9□□□□□ -1.3
HDAC6-219ENST00000476625 SNAPINO95295 136 aa6.9□□□□□ -1.3
HDAC6-219ENST00000476625 RPL28P46779 137 aaKnown RBP6.9□□□□□ -1.3
HDAC6-219ENST00000476625 RHEBQ15382 184 aa6.9□□□□□ -1.3
HDAC6-219ENST00000476625 TEX43Q6ZNM6 134 aa6.9□□□□□ -1.3
HDAC6-219ENST00000476625 ATP5L2Q7Z4Y8 100 aa6.9□□□□□ -1.3
HDAC6-219ENST00000476625 SVBPQ8N300 66 aa6.9□□□□□ -1.3
HDAC6-219ENST00000476625 LINC00304Q8N9R0 145 aa6.9□□□□□ -1.3
HDAC6-219ENST00000476625 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
HDAC6-219ENST00000476625 PRSS2P07478 247 aa6.89□□□□□ -1.31
HDAC6-219ENST00000476625 S100PP25815 95 aa6.89□□□□□ -1.31
HDAC6-219ENST00000476625 CKS1BP61024 79 aa6.89□□□□□ -1.31
HDAC6-219ENST00000476625 KRTAP13-1Q8IUC0 172 aa6.89□□□□□ -1.31
HDAC6-219ENST00000476625 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
HDAC6-219ENST00000476625 PYGO1Q9Y3Y4 419 aa6.89□□□□□ -1.31
HDAC6-219ENST00000476625 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
HDAC6-219ENST00000476625 COX19Q49B96 90 aa6.88□□□□□ -1.31
HDAC6-219ENST00000476625 LBHQ53QV2 105 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-219ENST00000476625 C6orf226Q5I0X4 101 aa6.88□□□□□ -1.31
HDAC6-219ENST00000476625 Q8IZM0 81 aa6.88□□□□□ -1.31
HDAC6-219ENST00000476625 PRELID3AQ96N28 172 aa6.88□□□□□ -1.31
HDAC6-219ENST00000476625 ALKBH7Q9BT30 221 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-219ENST00000476625 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
HDAC6-219ENST00000476625 RAB5AP20339 215 aa6.87□□□□□ -1.31
HDAC6-219ENST00000476625 PRLHP81277 87 aa6.87□□□□□ -1.31
HDAC6-219ENST00000476625 Q6ZN92 141 aa6.87□□□□□ -1.31
HDAC6-219ENST00000476625 C3orf22Q8N5N4 141 aa6.87□□□□□ -1.31
HDAC6-219ENST00000476625 AMELXQ99217 191 aa6.87□□□□□ -1.31
HDAC6-219ENST00000476625 APOC3P02656 99 aa6.86□□□□□ -1.31
HDAC6-219ENST00000476625 ADCYAP1P18509 176 aa6.86□□□□□ -1.31
HDAC6-219ENST00000476625 UBE2AP49459 152 aa6.86□□□□□ -1.31
HDAC6-219ENST00000476625 C2orf66Q6UXQ4 117 aa6.86□□□□□ -1.31
HDAC6-219ENST00000476625 TMEM136Q6ZRR5 245 aa6.86□□□□□ -1.31
HDAC6-219ENST00000476625 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
HDAC6-219ENST00000476625 LINC01561Q8N1V8 128 aa6.86□□□□□ -1.31
HDAC6-219ENST00000476625 TP73-AS1Q9UF72 201 aa6.86□□□□□ -1.31
HDAC6-219ENST00000476625 IGKV2-28A0A075B6P5 120 aa6.85□□□□□ -1.31
HDAC6-219ENST00000476625 F8VRH5 84 aa6.85□□□□□ -1.31
HDAC6-219ENST00000476625 IGKV2D-28P01615 120 aa6.85□□□□□ -1.31
HDAC6-219ENST00000476625 PPBPP02775 128 aa6.85□□□□□ -1.31
HDAC6-219ENST00000476625 SMCPP49901 116 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-219ENST00000476625 C2orf88Q9BSF0 95 aa6.85□□□□□ -1.31
HDAC6-219ENST00000476625 PPDPFQ9H3Y8 114 aa6.85□□□□□ -1.31
HDAC6-219ENST00000476625 RPS10P5Q9NQ39 176 aa6.85□□□□□ -1.31
HDAC6-219ENST00000476625 RAB5BP61020 215 aa6.84□□□□□ -1.31
HDAC6-219ENST00000476625 VCX2Q9H322 139 aa6.84□□□□□ -1.31
HDAC6-219ENST00000476625 IGIPA6NJ69 53 aa6.83□□□□□ -1.32
HDAC6-219ENST00000476625 TMEM238C9JI98 176 aa6.83□□□□□ -1.32
HDAC6-219ENST00000476625 CYSLTR1Q9Y271 337 aa6.83□□□□□ -1.32
HDAC6-219ENST00000476625 SMIM1B2RUZ4 78 aa6.82□□□□□ -1.32
HDAC6-219ENST00000476625 FAM229BQ4G0N7 80 aa6.82□□□□□ -1.32
HDAC6-219ENST00000476625 FAM19A3Q7Z5A8 133 aa6.82□□□□□ -1.32
HDAC6-219ENST00000476625 Q8N8P6 123 aa6.82□□□□□ -1.32
HDAC6-219ENST00000476625 MAP1LC3AQ9H492 121 aa6.82□□□□□ -1.32
HDAC6-219ENST00000476625 CRCT1Q9UGL9 99 aa6.82□□□□□ -1.32
HDAC6-219ENST00000476625 LAMTOR2Q9Y2Q5 125 aa6.82□□□□□ -1.32
HDAC6-219ENST00000476625 IGKV2D-26A0A0A0MRZ7 120 aa6.81□□□□□ -1.32
HDAC6-219ENST00000476625 Q8NDZ9 215 aa6.81□□□□□ -1.32
HDAC6-219ENST00000476625 IGLV5-37A0A075B6J1 123 aa6.8□□□□□ -1.32
HDAC6-219ENST00000476625 PRSS47A8MTI9 375 aa6.8□□□□□ -1.32
HDAC6-219ENST00000476625 SPINK8P0C7L1 97 aa6.8□□□□□ -1.32
HDAC6-219ENST00000476625 FAM19A1Q7Z5A9 133 aa6.8□□□□□ -1.32
HDAC6-219ENST00000476625 SLC7A5P1Q8MH63 180 aa6.8□□□□□ -1.32
HDAC6-219ENST00000476625 GNB1LQ9BYB4 327 aa6.8□□□□□ -1.32
HDAC6-219ENST00000476625 HERVK_113P63121 156 aa6.79□□□□□ -1.32
HDAC6-219ENST00000476625 NKAPP1Q8N9T2 125 aa6.79□□□□□ -1.32
HDAC6-219ENST00000476625 COX7B2Q8TF08 81 aa6.79□□□□□ -1.32
HDAC6-219ENST00000476625 GEMIN7Q9H840 131 aaKnown RBP6.79□□□□□ -1.32
HDAC6-219ENST00000476625 SMCO4Q9NRQ5 59 aa6.79□□□□□ -1.32
HDAC6-219ENST00000476625 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
HDAC6-219ENST00000476625 G0S2P27469 103 aa6.77□□□□□ -1.33
HDAC6-219ENST00000476625 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
HDAC6-219ENST00000476625 DAND5Q8N907 189 aa6.77□□□□□ -1.33
HDAC6-219ENST00000476625 TMEM126AQ9H061 195 aa6.77□□□□□ -1.33
HDAC6-219ENST00000476625 K7EMI3 77 aa6.76□□□□□ -1.33
HDAC6-219ENST00000476625 M0R378 163 aa6.76□□□□□ -1.33
HDAC6-219ENST00000476625 S100A1P23297 94 aa6.76□□□□□ -1.33
HDAC6-219ENST00000476625 PFN2P35080 140 aa6.76□□□□□ -1.33
HDAC6-219ENST00000476625 LINC01547P58512 204 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-219ENST00000476625 ORMDL2Q53FV1 153 aa6.76□□□□□ -1.33
HDAC6-219ENST00000476625 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
HDAC6-219ENST00000476625 VPREB1P12018 145 aa6.75□□□□□ -1.33
HDAC6-219ENST00000476625 CXCL5P42830 114 aa6.75□□□□□ -1.33
HDAC6-219ENST00000476625 KIAA1644Q3SXP7 199 aa6.75□□□□□ -1.33
HDAC6-219ENST00000476625 ASB16-AS1Q495Z4 193 aa6.75□□□□□ -1.33
HDAC6-219ENST00000476625 LINC01549A6NIU2 74 aa6.74□□□□□ -1.33
HDAC6-219ENST00000476625 PDZD11Q5EBL8 140 aa6.74□□□□□ -1.33
HDAC6-219ENST00000476625 TOMM6Q96B49 74 aa6.74□□□□□ -1.33
HDAC6-219ENST00000476625 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
HDAC6-219ENST00000476625 LCE2BO14633 110 aa6.73□□□□□ -1.33
HDAC6-219ENST00000476625 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
HDAC6-219ENST00000476625 TIMM17AQ99595 171 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms