RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 MUC7Q8TAX7 377 aa9.54□□□□□ -0.88
HDAC1-206ENST00000476391 ZNF292O60281 2723 aa9.54□□□□□ -0.88
HDAC1-206ENST00000476391 CD164Q04900 197 aa9.53□□□□□ -0.88
HDAC1-206ENST00000476391 OCR1Q9BZK8 76 aa9.53□□□□□ -0.88
HDAC1-206ENST00000476391 IGLV4-60A0A075B6I1 120 aa9.53□□□□□ -0.88
HDAC1-206ENST00000476391 ACACAQ13085 2346 aa9.53□□□□□ -0.88
HDAC1-206ENST00000476391 COX17Q14061 63 aa9.52□□□□□ -0.89
HDAC1-206ENST00000476391 SPATA3Q8NHX4 192 aa9.52□□□□□ -0.89
HDAC1-206ENST00000476391 BBC3Q96PG8 261 aaPredicted RBP9.52□□□□□ -0.89
HDAC1-206ENST00000476391 SCXQ7RTU7 201 aa9.52□□□□□ -0.89
HDAC1-206ENST00000476391 AKAP6Q13023 2319 aa9.51□□□□□ -0.89
HDAC1-206ENST00000476391 hDV103S1A0JD37 113 aa9.51□□□□□ -0.89
HDAC1-206ENST00000476391 AKAP13Q12802 2813 aa9.51□□□□□ -0.89
HDAC1-206ENST00000476391 HRNRQ86YZ3 2850 aaPredicted RBP9.51□□□□□ -0.89
HDAC1-206ENST00000476391 ASH1LQ9NR48 2969 aaKnown RBP9.5□□□□□ -0.89
HDAC1-206ENST00000476391 IGHV4-31P0DP07 118 aa9.5□□□□□ -0.89
HDAC1-206ENST00000476391 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
HDAC1-206ENST00000476391 MAP6D1Q9H9H5 199 aa9.49□□□□□ -0.89
HDAC1-206ENST00000476391 ATMQ13315 3056 aa9.49□□□□□ -0.89
HDAC1-206ENST00000476391 DAD1P61803 113 aa9.48□□□□□ -0.89
HDAC1-206ENST00000476391 C10orf99Q6UWK7 81 aa9.48□□□□□ -0.89
HDAC1-206ENST00000476391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.48□□□□□ -0.893e-8■■■□□ 17.3
HDAC1-206ENST00000476391 CD164L2Q6UWJ8 174 aa9.48□□□□□ -0.89
HDAC1-206ENST00000476391 TRBV6-8A0A0A6YYG3 113 aa9.47□□□□□ -0.89
HDAC1-206ENST00000476391 SPTAN1Q13813 2472 aaKnown RBP9.47□□□□□ -0.89
HDAC1-206ENST00000476391 Q6ZQY7 126 aa9.47□□□□□ -0.89
HDAC1-206ENST00000476391 GVINP1Q7Z2Y8 2422 aa9.47□□□□□ -0.89
HDAC1-206ENST00000476391 Q6ZRP5 223 aa9.47□□□□□ -0.89
HDAC1-206ENST00000476391 A0A1W2PPR1 153 aa9.46□□□□□ -0.9
HDAC1-206ENST00000476391 PLA2G2AP14555 144 aa9.46□□□□□ -0.9
HDAC1-206ENST00000476391 HIGD2AQ9BW72 106 aa9.46□□□□□ -0.9
HDAC1-206ENST00000476391 ABCA2Q9BZC7 2435 aa9.45□□□□□ -0.9
HDAC1-206ENST00000476391 IGKV4-1P06312 121 aa9.45□□□□□ -0.9
HDAC1-206ENST00000476391 C19orf84I3L1E1 186 aa9.44□□□□□ -0.9
HDAC1-206ENST00000476391 UBE2E2Q96LR5 201 aa9.44□□□□□ -0.9
HDAC1-206ENST00000476391 ANKRD11Q6UB99 2663 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-206ENST00000476391 IGHV4-28A0A0C4DH34 117 aa9.43□□□□□ -0.9
HDAC1-206ENST00000476391 LOC100131303A0A0U1RQF7 123 aa9.43□□□□□ -0.9
HDAC1-206ENST00000476391 COX7BP24311 80 aa9.43□□□□□ -0.9
HDAC1-206ENST00000476391 SPTA1P02549 2419 aa9.42□□□□□ -0.9
HDAC1-206ENST00000476391 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-206ENST00000476391 ADORA2A-AS1P86434 159 aa9.42□□□□□ -0.9
HDAC1-206ENST00000476391 CREBBPQ92793 2442 aa9.42□□□□□ -0.9
HDAC1-206ENST00000476391 Q8NDZ9 215 aa9.41□□□□□ -0.9
HDAC1-206ENST00000476391 C1orf64Q8NEQ6 169 aa9.41□□□□□ -0.9
HDAC1-206ENST00000476391 RETNQ9HD89 108 aa9.41□□□□□ -0.9
HDAC1-206ENST00000476391 IGLV6-57P01721 117 aa9.41□□□□□ -0.9
HDAC1-206ENST00000476391 TRGV2A0A075B6R0 118 aa9.4□□□□□ -0.9
HDAC1-206ENST00000476391 IGHV4-30-2A0A087WSY4 118 aa9.4□□□□□ -0.9
HDAC1-206ENST00000476391 KIAA0087Q14695 138 aa9.4□□□□□ -0.9
HDAC1-206ENST00000476391 NOP10Q9NPE3 64 aaKnown RBP9.4□□□□□ -0.9
HDAC1-206ENST00000476391 LCE6AA0A183 80 aa9.4□□□□□ -0.91
HDAC1-206ENST00000476391 Q8N9L7 120 aa9.4□□□□□ -0.91
HDAC1-206ENST00000476391 LINC01006Q8NI28 216 aa9.4□□□□□ -0.91
HDAC1-206ENST00000476391 SLURP1P55000 103 aa9.39□□□□□ -0.91
HDAC1-206ENST00000476391 C2CD3Q4AC94 2353 aa9.39□□□□□ -0.91
HDAC1-206ENST00000476391 TRAV22A0A0B4J277 110 aa9.39□□□□□ -0.91
HDAC1-206ENST00000476391 SPTBN4Q9H254 2564 aa9.39□□□□□ -0.91
HDAC1-206ENST00000476391 CCL24O00175 119 aa9.38□□□□□ -0.91
HDAC1-206ENST00000476391 DEFB114Q30KQ6 69 aa9.38□□□□□ -0.91
HDAC1-206ENST00000476391 STHQ8IWL8 128 aa9.38□□□□□ -0.91
HDAC1-206ENST00000476391 A0A1B0GUV1 79 aa9.37□□□□□ -0.91
HDAC1-206ENST00000476391 CELSR1Q9NYQ6 3014 aa9.37□□□□□ -0.91
HDAC1-206ENST00000476391 TRGV4A0A0C4DH28 118 aa9.37□□□□□ -0.91
HDAC1-206ENST00000476391 LRCOL1A6NCL2 159 aa9.37□□□□□ -0.91
HDAC1-206ENST00000476391 PSPHP1O15172 72 aa9.37□□□□□ -0.91
HDAC1-206ENST00000476391 IGHV4-61A0A0C4DH41 118 aa9.36□□□□□ -0.91
HDAC1-206ENST00000476391 LYRM9A8MSI8 78 aa9.36□□□□□ -0.91
HDAC1-206ENST00000476391 IGHV4-59P01825 116 aa9.36□□□□□ -0.91
HDAC1-206ENST00000476391 MRPL55Q7Z7F7 128 aaKnown RBP9.36□□□□□ -0.91
HDAC1-206ENST00000476391 DIRC1Q969H9 104 aa9.35□□□□□ -0.91
HDAC1-206ENST00000476391 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
HDAC1-206ENST00000476391 C9orf116Q5BN46 136 aaPredicted RBP9.35□□□□□ -0.91
HDAC1-206ENST00000476391 PRB1P04280 392 aa9.34□□□□□ -0.91
HDAC1-206ENST00000476391 C16orf74Q96GX8 76 aa9.34□□□□□ -0.91
HDAC1-206ENST00000476391 CYP4F30PQ9H0H9 118 aa9.34□□□□□ -0.91
HDAC1-206ENST00000476391 ODF3L2Q3SX64 289 aa9.33□□□□□ -0.92
HDAC1-206ENST00000476391 ZCCHC13Q8WW36 166 aaKnown RBP9.33□□□□□ -0.92
HDAC1-206ENST00000476391 DEFB136Q30KP8 78 aa9.33□□□□□ -0.92
HDAC1-206ENST00000476391 LINC00269Q8N2A0 174 aa9.33□□□□□ -0.92
HDAC1-206ENST00000476391 CEP295Q9C0D2 2601 aa9.32□□□□□ -0.92
HDAC1-206ENST00000476391 LINC01356Q8N9X3 169 aa9.32□□□□□ -0.92
HDAC1-206ENST00000476391 ESM1Q9NQ30 184 aa9.32□□□□□ -0.92
HDAC1-206ENST00000476391 UBE2BP63146 152 aa9.32□□□□□ -0.92
HDAC1-206ENST00000476391 CELA1Q9UNI1 258 aa9.32□□□□□ -0.92
HDAC1-206ENST00000476391 PIEZO1Q92508 2521 aa9.32□□□□□ -0.92
HDAC1-206ENST00000476391 MSMBP08118 114 aa9.31□□□□□ -0.92
HDAC1-206ENST00000476391 IGHV4-30-4P0DP06 118 aa9.31□□□□□ -0.92
HDAC1-206ENST00000476391 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
HDAC1-206ENST00000476391 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
HDAC1-206ENST00000476391 KHDC1LQ5JSQ8 128 aa9.31□□□□□ -0.92
HDAC1-206ENST00000476391 KTN1-AS1Q86SY8 53 aa9.31□□□□□ -0.92
HDAC1-206ENST00000476391 LINC00612Q8N6U2 182 aa9.31□□□□□ -0.92
HDAC1-206ENST00000476391 PSCAO43653 123 aa9.3□□□□□ -0.92
HDAC1-206ENST00000476391 ELOF1P60002 83 aaKnown RBP9.3□□□□□ -0.92
HDAC1-206ENST00000476391 SMIM29Q86T20 159 aa9.3□□□□□ -0.92
HDAC1-206ENST00000476391 FAM30AQ9NZY2 134 aa9.3□□□□□ -0.92
HDAC1-206ENST00000476391 TLN1Q9Y490 2541 aaKnown RBP9.3□□□□□ -0.92
HDAC1-206ENST00000476391 DEFB112Q30KQ8 113 aa9.29□□□□□ -0.92
HDAC1-206ENST00000476391 CLPSL2Q6UWE3 100 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms