RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 KRTAP1-1Q07627 177 aa9.21□□□□□ -0.94
CCNL1-216ENST00000475298 PIK3CD-AS1Q5SR53 167 aa9.21□□□□□ -0.94
CCNL1-216ENST00000475298 A0A087WYN8 130 aa9.2□□□□□ -0.94
CCNL1-216ENST00000475298 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
CCNL1-216ENST00000475298 HELZ2Q9BYK8 2649 aaKnown RBP9.2□□□□□ -0.94
CCNL1-216ENST00000475298 CYSRT1A8MQ03 144 aa9.19□□□□□ -0.94
CCNL1-216ENST00000475298 F8WDY8 70 aa9.19□□□□□ -0.94
CCNL1-216ENST00000475298 Q6ZTI0 123 aa9.19□□□□□ -0.94
CCNL1-216ENST00000475298 LINC01006Q8NI28 216 aa9.19□□□□□ -0.94
CCNL1-216ENST00000475298 GHRHP01286 108 aa9.18□□□□□ -0.94
CCNL1-216ENST00000475298 KRTAP21-3Q3LHN1 58 aa9.18□□□□□ -0.94
CCNL1-216ENST00000475298 FAM236DA0A1B0GTK5 79 aa9.17□□□□□ -0.94
CCNL1-216ENST00000475298 FAM236CP0DP71 79 aa9.17□□□□□ -0.94
CCNL1-216ENST00000475298 COPS9Q8WXC6 57 aa9.17□□□□□ -0.94
CCNL1-216ENST00000475298 TMEM243Q9BU79 118 aa9.17□□□□□ -0.94
CCNL1-216ENST00000475298 IL17DQ8TAD2 202 aa9.17□□□□□ -0.94
CCNL1-216ENST00000475298 C1orf43Q9BWL3 253 aa9.17□□□□□ -0.94
CCNL1-216ENST00000475298 C16orf95Q9H693 158 aa9.17□□□□□ -0.94
CCNL1-216ENST00000475298 UNC79Q9P2D8 2635 aa9.17□□□□□ -0.94
CCNL1-216ENST00000475298 RPL35AP18077 110 aaKnown RBP9.16□□□□□ -0.94
CCNL1-216ENST00000475298 LINC00337Q8N6G1 96 aa9.16□□□□□ -0.94
CCNL1-216ENST00000475298 NCR3O14931 201 aa9.16□□□□□ -0.94
CCNL1-216ENST00000475298 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
CCNL1-216ENST00000475298 WFDC9Q8NEX5 89 aa9.16□□□□□ -0.94
CCNL1-216ENST00000475298 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.94
CCNL1-216ENST00000475298 GIG44P09565 113 aaPredicted RBP9.15□□□□□ -0.94
CCNL1-216ENST00000475298 NOP10Q9NPE3 64 aaKnown RBP9.15□□□□□ -0.94
CCNL1-216ENST00000475298 SERP1Q9Y6X1 66 aa9.15□□□□□ -0.94
CCNL1-216ENST00000475298 IGKV2-28A0A075B6P5 120 aa9.15□□□□□ -0.95
CCNL1-216ENST00000475298 TRAV23DV6A0A075B6W5 121 aa9.15□□□□□ -0.95
CCNL1-216ENST00000475298 IGKV2D-28P01615 120 aa9.15□□□□□ -0.95
CCNL1-216ENST00000475298 XCL1P47992 114 aa9.15□□□□□ -0.95
CCNL1-216ENST00000475298 LINC00242Q5T6M2 205 aa9.15□□□□□ -0.95
CCNL1-216ENST00000475298 H7BZZ5 65 aa9.14□□□□□ -0.95
CCNL1-216ENST00000475298 PF4P02776 101 aa9.14□□□□□ -0.95
CCNL1-216ENST00000475298 SS18Q15532 418 aa9.14□□□□□ -0.95
CCNL1-216ENST00000475298 DGAT2L7PQ6IED9 249 aa9.14□□□□□ -0.95
CCNL1-216ENST00000475298 TRAV13-2A0A0B4J235 113 aa9.13□□□□□ -0.95
CCNL1-216ENST00000475298 NTM-AS1Q6ZSK4 140 aa9.13□□□□□ -0.95
CCNL1-216ENST00000475298 FP248Q71RG6 208 aaPredicted RBP9.13□□□□□ -0.95
CCNL1-216ENST00000475298 FAM19A1Q7Z5A9 133 aa9.13□□□□□ -0.95
CCNL1-216ENST00000475298 SMIM11BQ8TCY0 68 aa9.13□□□□□ -0.95
CCNL1-216ENST00000475298 OVOL2Q9BRP0 275 aa9.13□□□□□ -0.95
CCNL1-216ENST00000475298 PKIGQ9Y2B9 76 aa9.13□□□□□ -0.95
CCNL1-216ENST00000475298 K7EQD1 137 aa9.13□□□□□ -0.95
CCNL1-216ENST00000475298 RNASE1P07998 156 aaKnown RBP9.13□□□□□ -0.95
CCNL1-216ENST00000475298 CRPP02741 224 aa9.12□□□□□ -0.95
CCNL1-216ENST00000475298 SMR3AQ99954 134 aa9.12□□□□□ -0.95
CCNL1-216ENST00000475298 LYPD5Q6UWN5 251 aa9.12□□□□□ -0.95
CCNL1-216ENST00000475298 LOC100131303A0A0U1RQF7 123 aa9.11□□□□□ -0.95
CCNL1-216ENST00000475298 PLAC8L1A1L4L8 177 aa9.11□□□□□ -0.95
CCNL1-216ENST00000475298 CCKP06307 115 aa9.11□□□□□ -0.95
CCNL1-216ENST00000475298 RPL36AP83881 106 aaKnown RBP9.11□□□□□ -0.95
CCNL1-216ENST00000475298 RPL36ALQ969Q0 106 aaKnown RBP9.11□□□□□ -0.95
CCNL1-216ENST00000475298 C19orf73Q9NVV2 129 aa9.11□□□□□ -0.95
CCNL1-216ENST00000475298 MAST4O15021 2626 aa9.11□□□□□ -0.95
CCNL1-216ENST00000475298 LECT2O14960 151 aa9.1□□□□□ -0.95
CCNL1-216ENST00000475298 IGLV1-51P01701 117 aa9.1□□□□□ -0.95
CCNL1-216ENST00000475298 SLPIP03973 132 aa9.1□□□□□ -0.95
CCNL1-216ENST00000475298 MIR7-3HGQ8N6C7 128 aa9.1□□□□□ -0.95
CCNL1-216ENST00000475298 ENHOQ6UWT2 76 aa9.09□□□□□ -0.95
CCNL1-216ENST00000475298 FAM19A3Q7Z5A8 133 aa9.09□□□□□ -0.95
CCNL1-216ENST00000475298 VWFP04275 2813 aa9.09□□□□□ -0.95
CCNL1-216ENST00000475298 FN1P02751 2386 aaKnown RBP9.09□□□□□ -0.95
CCNL1-216ENST00000475298 FLNBO75369 2602 aaKnown RBP9.09□□□□□ -0.95
CCNL1-216ENST00000475298 TRGV2A0A075B6R0 118 aa9.08□□□□□ -0.96
CCNL1-216ENST00000475298 H0YGX0 51 aa9.08□□□□□ -0.96
CCNL1-216ENST00000475298 HIVEP2P31629 2446 aa9.08□□□□□ -0.96
CCNL1-216ENST00000475298 HECTD1Q9ULT8 2610 aa9.08□□□□□ -0.96
CCNL1-216ENST00000475298 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
CCNL1-216ENST00000475298 ATP5EP2Q5VTU8 51 aa9.08□□□□□ -0.96
CCNL1-216ENST00000475298 TRBV10-1A0A0K0K1A3 114 aa9.07□□□□□ -0.96
CCNL1-216ENST00000475298 SND1-IT1Q9HBX3 110 aa9.07□□□□□ -0.96
CCNL1-216ENST00000475298 CSNK1G2-AS1Q8NCQ2 148 aa9.07□□□□□ -0.96
CCNL1-216ENST00000475298 NOTCH2Q04721 2471 aa9.07□□□□□ -0.96
CCNL1-216ENST00000475298 SMIM26A0A096LP01 95 aa9.06□□□□□ -0.96
CCNL1-216ENST00000475298 C16orf74Q96GX8 76 aa9.06□□□□□ -0.96
CCNL1-216ENST00000475298 KRTAP10-3P60369 221 aa9.06□□□□□ -0.96
CCNL1-216ENST00000475298 S100A7L2Q5SY68 101 aa9.06□□□□□ -0.96
CCNL1-216ENST00000475298 CDC42SE2Q9NRR3 84 aa9.05□□□□□ -0.96
CCNL1-216ENST00000475298 KLKP1Q107X0 134 aa9.05□□□□□ -0.96
CCNL1-216ENST00000475298 TRBV10-3A0A0K0K1G6 114 aa9.04□□□□□ -0.96
CCNL1-216ENST00000475298 ORMDL1Q9P0S3 153 aa9.04□□□□□ -0.96
CCNL1-216ENST00000475298 LINC00474Q9P2X8 69 aa9.04□□□□□ -0.96
CCNL1-216ENST00000475298 TRAV7A0A075B6U4 112 aa9.04□□□□□ -0.96
CCNL1-216ENST00000475298 TRGV4A0A0C4DH28 118 aa9.04□□□□□ -0.96
CCNL1-216ENST00000475298 IGKV3OR2-268A0A0C4DH90 116 aa9.03□□□□□ -0.96
CCNL1-216ENST00000475298 UBE2L6O14933 153 aa9.03□□□□□ -0.96
CCNL1-216ENST00000475298 CMC4P56277 68 aaPredicted RBP9.03□□□□□ -0.96
CCNL1-216ENST00000475298 CCL18P55774 89 aa9.02□□□□□ -0.96
CCNL1-216ENST00000475298 OTOGQ6ZRI0 2925 aa9.02□□□□□ -0.96
CCNL1-216ENST00000475298 SEC61GP60059 68 aa9.02□□□□□ -0.97
CCNL1-216ENST00000475298 SPATA3Q8NHX4 192 aa9.01□□□□□ -0.97
CCNL1-216ENST00000475298 RMI2Q96E14 147 aa9.01□□□□□ -0.97
CCNL1-216ENST00000475298 SNURFQ9Y675 71 aa9.01□□□□□ -0.97
CCNL1-216ENST00000475298 TENM1Q9UKZ4 2725 aa9.01□□□□□ -0.97
CCNL1-216ENST00000475298 TRBV6-4A0A1B0GX49 114 aa9□□□□□ -0.97
CCNL1-216ENST00000475298 DEFB130BP0DP73 79 aa9□□□□□ -0.97
CCNL1-216ENST00000475298 DEFB130AP0DP74 79 aa9□□□□□ -0.97
CCNL1-216ENST00000475298 LINC00167Q96N53 147 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms