RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 TPRP12270 2363 aaKnown RBP0.67□□□□□ -2.3
RFXAP-202ENST00000472888 A0A1B0GU69 56 aa0.67□□□□□ -2.3
RFXAP-202ENST00000472888 C6orf201Q7Z4U5 140 aa0.67□□□□□ -2.3
RFXAP-202ENST00000472888 DEFB123Q8N688 67 aa0.67□□□□□ -2.3
RFXAP-202ENST00000472888 S100A16Q96FQ6 103 aaKnown RBP0.67□□□□□ -2.3
RFXAP-202ENST00000472888 CHD9Q3L8U1 2897 aa0.67□□□□□ -2.3
RFXAP-202ENST00000472888 TULP4Q9NRJ4 1543 aa0.67□□□□□ -2.3
RFXAP-202ENST00000472888 SETBP1Q9Y6X0 1596 aa0.66□□□□□ -2.3
RFXAP-202ENST00000472888 CACNA1EQ15878 2313 aa0.66□□□□□ -2.3
RFXAP-202ENST00000472888 CELSR2Q9HCU4 2923 aa0.66□□□□□ -2.3
RFXAP-202ENST00000472888 CEP162Q5TB80 1403 aa0.66□□□□□ -2.3
RFXAP-202ENST00000472888 ABCC3O15438 1527 aa0.66□□□□□ -2.3
RFXAP-202ENST00000472888 LINC00959A0A1B0GUT2 108 aa0.66□□□□□ -2.3
RFXAP-202ENST00000472888 SPINK1P00995 79 aa0.66□□□□□ -2.3
RFXAP-202ENST00000472888 HMGN2P05204 90 aaKnown RBP0.66□□□□□ -2.3
RFXAP-202ENST00000472888 F8P00451 2351 aa0.65□□□□□ -2.3
RFXAP-202ENST00000472888 TNCP24821 2201 aa0.65□□□□□ -2.3
RFXAP-202ENST00000472888 BIVM-ERCC5R4GMW8 1640 aa0.65□□□□□ -2.31
RFXAP-202ENST00000472888 FXYD6-FXYD2A0A087WZ82 144 aa0.65□□□□□ -2.31
RFXAP-202ENST00000472888 CYB5AP00167 134 aa0.65□□□□□ -2.31
RFXAP-202ENST00000472888 WFDC2Q14508 124 aa0.65□□□□□ -2.31
RFXAP-202ENST00000472888 SPTBN2O15020 2390 aa0.65□□□□□ -2.31
RFXAP-202ENST00000472888 NLRP1Q9C000 1473 aa0.65□□□□□ -2.31
RFXAP-202ENST00000472888 RB1CC1Q8TDY2 1594 aa0.65□□□□□ -2.31
RFXAP-202ENST00000472888 ANKRD17O75179 2603 aaKnown RBP0.65□□□□□ -2.31
RFXAP-202ENST00000472888 CUX1P39880 1505 aa0.64□□□□□ -2.31
RFXAP-202ENST00000472888 PAPPAQ13219 1627 aa0.64□□□□□ -2.31
RFXAP-202ENST00000472888 A0A0G2JMZ2 1700 aa0.64□□□□□ -2.31
RFXAP-202ENST00000472888 XRN1Q8IZH2 1706 aaKnown RBP0.64□□□□□ -2.31
RFXAP-202ENST00000472888 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
RFXAP-202ENST00000472888 USMG5Q96IX5 58 aa0.64□□□□□ -2.31
RFXAP-202ENST00000472888 CFDP00746 253 aaPredicted RBP0.63□□□□□ -2.31
RFXAP-202ENST00000472888 COX6B1P14854 86 aa0.63□□□□□ -2.31
RFXAP-202ENST00000472888 KIAA1551Q9HCM1 1747 aa0.63□□□□□ -2.31
RFXAP-202ENST00000472888 CCDC141Q6ZP82 1450 aa0.62□□□□□ -2.31
RFXAP-202ENST00000472888 ZNF292O60281 2723 aa0.62□□□□□ -2.31
RFXAP-202ENST00000472888 SNRPFP62306 86 aaKnown RBP0.62□□□□□ -2.31
RFXAP-202ENST00000472888 Q5VSD8 79 aa0.62□□□□□ -2.31
RFXAP-202ENST00000472888 C2CD3Q4AC94 2353 aa0.62□□□□□ -2.31
RFXAP-202ENST00000472888 KNDC1Q76NI1 1749 aa0.61□□□□□ -2.31
RFXAP-202ENST00000472888 ANK2Q01484 3957 aa0.61□□□□□ -2.31
RFXAP-202ENST00000472888 NHSL1Q5SYE7 1610 aa0.61□□□□□ -2.31
RFXAP-202ENST00000472888 NMSQ5H8A3 153 aa0.61□□□□□ -2.31
RFXAP-202ENST00000472888 UBE2D4Q9Y2X8 147 aa0.61□□□□□ -2.31
RFXAP-202ENST00000472888 UACAQ9BZF9 1416 aa0.61□□□□□ -2.31
RFXAP-202ENST00000472888 MON2Q7Z3U7 1717 aa0.6□□□□□ -2.31
RFXAP-202ENST00000472888 USP24Q9UPU5 2620 aa0.6□□□□□ -2.31
RFXAP-202ENST00000472888 DNAJC13O75165 2243 aa0.6□□□□□ -2.31
RFXAP-202ENST00000472888 SHPRHQ149N8 1683 aa0.59□□□□□ -2.31
RFXAP-202ENST00000472888 K7EQZ3 153 aa0.59□□□□□ -2.31
RFXAP-202ENST00000472888 ACYP1P07311 99 aa0.59□□□□□ -2.31
RFXAP-202ENST00000472888 IGLC3P0DOY3 106 aa0.59□□□□□ -2.31
RFXAP-202ENST00000472888 COX8AP10176 69 aa0.59□□□□□ -2.31
RFXAP-202ENST00000472888 PLGLAQ15195 96 aa0.59□□□□□ -2.31
RFXAP-202ENST00000472888 LINC00643Q86TS7 51 aa0.59□□□□□ -2.31
RFXAP-202ENST00000472888 PIEZO2Q9H5I5 2752 aa0.59□□□□□ -2.32
RFXAP-202ENST00000472888 PLCE1Q9P212 2302 aa0.59□□□□□ -2.32
RFXAP-202ENST00000472888 TARBP1Q13395 1621 aaKnown RBP0.58□□□□□ -2.32
RFXAP-202ENST00000472888 IGLC2P0DOY2 106 aa0.58□□□□□ -2.32
RFXAP-202ENST00000472888 SAMD9Q5K651 1589 aa0.57□□□□□ -2.32
RFXAP-202ENST00000472888 MYO3AQ8NEV4 1616 aa0.57□□□□□ -2.32
RFXAP-202ENST00000472888 KANTRA0A1W2PQU2 76 aa0.57□□□□□ -2.32
RFXAP-202ENST00000472888 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
RFXAP-202ENST00000472888 CRIPTQ9P021 101 aa0.57□□□□□ -2.32
RFXAP-202ENST00000472888 U3KQA8 63 aa0.57□□□□□ -2.32
RFXAP-202ENST00000472888 NEXMIFQ5QGS0 1516 aa0.57□□□□□ -2.32
RFXAP-202ENST00000472888 MED14O60244 1454 aa0.56□□□□□ -2.32
RFXAP-202ENST00000472888 ZFYVE26Q68DK2 2539 aa0.56□□□□□ -2.32
RFXAP-202ENST00000472888 MYMXA0A1B0GTQ4 84 aa0.56□□□□□ -2.32
RFXAP-202ENST00000472888 A0A1B0GUT8 65 aa0.56□□□□□ -2.32
RFXAP-202ENST00000472888 IQCF6A8MYZ5 107 aa0.56□□□□□ -2.32
RFXAP-202ENST00000472888 SPRR1AP35321 89 aa0.56□□□□□ -2.32
RFXAP-202ENST00000472888 DEFB109BQ30KR1 87 aa0.56□□□□□ -2.32
RFXAP-202ENST00000472888 TDRG1Q3Y452 100 aa0.56□□□□□ -2.32
RFXAP-202ENST00000472888 S100A13Q99584 98 aa0.56□□□□□ -2.32
RFXAP-202ENST00000472888 CCDC18Q5T9S5 1454 aa0.55□□□□□ -2.32
RFXAP-202ENST00000472888 RGPD4Q7Z3J3 1758 aa0.55□□□□□ -2.32
RFXAP-202ENST00000472888 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
RFXAP-202ENST00000472888 SPRR1BP22528 89 aa0.55□□□□□ -2.32
RFXAP-202ENST00000472888 MYH4Q9Y623 1939 aa0.54□□□□□ -2.32
RFXAP-202ENST00000472888 OTOGQ6ZRI0 2925 aa0.54□□□□□ -2.32
RFXAP-202ENST00000472888 C5P01031 1676 aa0.54□□□□□ -2.32
RFXAP-202ENST00000472888 PAPPA2Q9BXP8 1791 aa0.54□□□□□ -2.32
RFXAP-202ENST00000472888 USF3Q68DE3 2245 aa0.54□□□□□ -2.32
RFXAP-202ENST00000472888 NAV2Q8IVL1 2488 aa0.54□□□□□ -2.32
RFXAP-202ENST00000472888 LRRC37AA6NMS7 1700 aa0.53□□□□□ -2.32
RFXAP-202ENST00000472888 I3L3M4 83 aa0.53□□□□□ -2.32
RFXAP-202ENST00000472888 DEFB112Q30KQ8 113 aa0.53□□□□□ -2.32
RFXAP-202ENST00000472888 UNC79Q9P2D8 2635 aa0.53□□□□□ -2.32
RFXAP-202ENST00000472888 PTPRZ1P23471 2315 aaPredicted RBP0.53□□□□□ -2.33
RFXAP-202ENST00000472888 CEBPZOSA8MTT3 80 aa0.52□□□□□ -2.33
RFXAP-202ENST00000472888 ADIRFQ15847 76 aa0.52□□□□□ -2.33
RFXAP-202ENST00000472888 SLIT1O75093 1534 aa0.52□□□□□ -2.33
RFXAP-202ENST00000472888 GPR98Q8WXG9 6306 aa0.52□□□□□ -2.33
RFXAP-202ENST00000472888 KIAA0556O60303 1618 aa0.52□□□□□ -2.33
RFXAP-202ENST00000472888 CRYBG1Q9Y4K1 1723 aa0.52□□□□□ -2.33
RFXAP-202ENST00000472888 RGPD3A6NKT7 1758 aaPredicted RBP0.52□□□□□ -2.33
RFXAP-202ENST00000472888 DOPEY2Q9Y3R5 2298 aa0.52□□□□□ -2.33
RFXAP-202ENST00000472888 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
RFXAP-202ENST00000472888 SPTY2D1-AS1A0A0U1RR47 76 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms