RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 C14orf132Q9NPU4 83 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 A0A087WYN8 130 aa9.32□□□□□ -0.92
SCAMP4-207ENST00000472442 IGKV3D-7A0A0C4DH55 119 aa9.32□□□□□ -0.92
SCAMP4-207ENST00000472442 RPL28P46779 137 aaKnown RBP9.32□□□□□ -0.92
SCAMP4-207ENST00000472442 TRRAPQ9Y4A5 3859 aa9.32□□□□□ -0.92
SCAMP4-207ENST00000472442 TRGV1A0A0A0MS02 117 aa9.32□□□□□ -0.92
SCAMP4-207ENST00000472442 TRAV13-2A0A0B4J235 113 aa9.32□□□□□ -0.92
SCAMP4-207ENST00000472442 PLAC8L1A1L4L8 177 aa9.32□□□□□ -0.92
SCAMP4-207ENST00000472442 Q6ZTI0 123 aa9.32□□□□□ -0.92
SCAMP4-207ENST00000472442 FAM19A5Q7Z5A7 132 aaPredicted RBP9.32□□□□□ -0.92
SCAMP4-207ENST00000472442 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
SCAMP4-207ENST00000472442 A0A1B0GX51 115 aa9.31□□□□□ -0.92
SCAMP4-207ENST00000472442 IGKV2-28A0A075B6P5 120 aa9.3□□□□□ -0.92
SCAMP4-207ENST00000472442 IGKV2D-28P01615 120 aa9.3□□□□□ -0.92
SCAMP4-207ENST00000472442 RPL18AQ02543 176 aaKnown RBP9.3□□□□□ -0.92
SCAMP4-207ENST00000472442 NTM-AS1Q6ZSK4 140 aa9.3□□□□□ -0.92
SCAMP4-207ENST00000472442 MIR7-3HGQ8N6C7 128 aa9.3□□□□□ -0.92
SCAMP4-207ENST00000472442 A0A087WVE0 104 aa9.29□□□□□ -0.92
SCAMP4-207ENST00000472442 SND1-IT1Q9HBX3 110 aa9.29□□□□□ -0.92
SCAMP4-207ENST00000472442 NOP10Q9NPE3 64 aaKnown RBP9.29□□□□□ -0.92
SCAMP4-207ENST00000472442 SMIM11BQ8TCY0 68 aa9.29□□□□□ -0.92
SCAMP4-207ENST00000472442 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
SCAMP4-207ENST00000472442 LINC00846Q9NV44 126 aa9.29□□□□□ -0.92
SCAMP4-207ENST00000472442 FLNBO75369 2602 aaKnown RBP9.28□□□□□ -0.92
SCAMP4-207ENST00000472442 ATRQ13535 2644 aa9.28□□□□□ -0.92
SCAMP4-207ENST00000472442 SMIM9A6NGZ8 99 aa9.27□□□□□ -0.92
SCAMP4-207ENST00000472442 TOMM7Q9P0U1 55 aa9.27□□□□□ -0.92
SCAMP4-207ENST00000472442 RPL36AP83881 106 aaKnown RBP9.27□□□□□ -0.93
SCAMP4-207ENST00000472442 RPL36ALQ969Q0 106 aaKnown RBP9.27□□□□□ -0.93
SCAMP4-207ENST00000472442 C16orf74Q96GX8 76 aa9.27□□□□□ -0.93
SCAMP4-207ENST00000472442 TEP1Q99973 2627 aaKnown RBP9.27□□□□□ -0.93
SCAMP4-207ENST00000472442 OVOL2Q9BRP0 275 aa9.27□□□□□ -0.93
SCAMP4-207ENST00000472442 C5orf47Q569G3 176 aa9.26□□□□□ -0.93
SCAMP4-207ENST00000472442 Q6JHZ5 121 aa9.26□□□□□ -0.93
SCAMP4-207ENST00000472442 F8P00451 2351 aa9.26□□□□□ -0.93
SCAMP4-207ENST00000472442 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
SCAMP4-207ENST00000472442 K7EQD1 137 aa9.25□□□□□ -0.93
SCAMP4-207ENST00000472442 NCR3O14931 201 aa9.25□□□□□ -0.93
SCAMP4-207ENST00000472442 LECT2O14960 151 aa9.25□□□□□ -0.93
SCAMP4-207ENST00000472442 LINC00158P58513 81 aa9.25□□□□□ -0.93
SCAMP4-207ENST00000472442 C9orf66Q5T8R8 295 aa9.25□□□□□ -0.93
SCAMP4-207ENST00000472442 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
SCAMP4-207ENST00000472442 IGKV3OR2-268A0A0C4DH90 116 aa9.24□□□□□ -0.93
SCAMP4-207ENST00000472442 SLPIP03973 132 aa9.24□□□□□ -0.93
SCAMP4-207ENST00000472442 LINC01561Q8N1V8 128 aa9.24□□□□□ -0.93
SCAMP4-207ENST00000472442 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
SCAMP4-207ENST00000472442 UBE2L6O14933 153 aa9.24□□□□□ -0.93
SCAMP4-207ENST00000472442 CCL18P55774 89 aa9.24□□□□□ -0.93
SCAMP4-207ENST00000472442 RPS28P62857 69 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-207ENST00000472442 OBSCN-AS1Q96MR7 158 aa9.24□□□□□ -0.93
SCAMP4-207ENST00000472442 USP17L23D6RBM5 183 aa9.23□□□□□ -0.93
SCAMP4-207ENST00000472442 UPK3BQ9BT76 320 aa9.23□□□□□ -0.93
SCAMP4-207ENST00000472442 H0YGX0 51 aa9.22□□□□□ -0.93
SCAMP4-207ENST00000472442 TMEM258P61165 79 aa9.22□□□□□ -0.93
SCAMP4-207ENST00000472442 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
SCAMP4-207ENST00000472442 TRGV2A0A075B6R0 118 aa9.21□□□□□ -0.93
SCAMP4-207ENST00000472442 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.93
SCAMP4-207ENST00000472442 DPH3Q96FX2 82 aa9.21□□□□□ -0.93
SCAMP4-207ENST00000472442 DSCR8Q96T75 97 aa9.21□□□□□ -0.93
SCAMP4-207ENST00000472442 TMEM243Q9BU79 118 aa9.21□□□□□ -0.93
SCAMP4-207ENST00000472442 PFN2P35080 140 aa9.21□□□□□ -0.94
SCAMP4-207ENST00000472442 NBEAL2Q6ZNJ1 2754 aa9.21□□□□□ -0.94
SCAMP4-207ENST00000472442 PAX4O43316 350 aa9.2□□□□□ -0.94
SCAMP4-207ENST00000472442 X6R8D5 127 aa9.2□□□□□ -0.94
SCAMP4-207ENST00000472442 OXTP01178 125 aa9.19□□□□□ -0.94
SCAMP4-207ENST00000472442 WFDC9Q8NEX5 89 aa9.19□□□□□ -0.94
SCAMP4-207ENST00000472442 LOC100131303A0A0U1RQF7 123 aa9.19□□□□□ -0.94
SCAMP4-207ENST00000472442 SS18Q15532 418 aa9.18□□□□□ -0.94
SCAMP4-207ENST00000472442 FHL2Q14192 279 aa9.18□□□□□ -0.94
SCAMP4-207ENST00000472442 ORMDL1Q9P0S3 153 aa9.17□□□□□ -0.94
SCAMP4-207ENST00000472442 FBN1P35555 2871 aaKnown RBP9.17□□□□□ -0.94
SCAMP4-207ENST00000472442 TRBV6-4A0A1B0GX49 114 aa9.17□□□□□ -0.94
SCAMP4-207ENST00000472442 IBA57-AS1B1ANH7 110 aa9.16□□□□□ -0.94
SCAMP4-207ENST00000472442 C11orf68Q9H3H3 251 aaKnown RBP9.16□□□□□ -0.94
SCAMP4-207ENST00000472442 IGLV4-60A0A075B6I1 120 aa9.16□□□□□ -0.94
SCAMP4-207ENST00000472442 LINC00612Q8N6U2 182 aa9.16□□□□□ -0.94
SCAMP4-207ENST00000472442 TRGV4A0A0C4DH28 118 aa9.15□□□□□ -0.94
SCAMP4-207ENST00000472442 DEFB130BP0DP73 79 aa9.15□□□□□ -0.94
SCAMP4-207ENST00000472442 DEFB130AP0DP74 79 aa9.15□□□□□ -0.94
SCAMP4-207ENST00000472442 IGHV3OR16-9A0A0B4J2B5 98 aa9.15□□□□□ -0.94
SCAMP4-207ENST00000472442 CCKP06307 115 aa9.15□□□□□ -0.94
SCAMP4-207ENST00000472442 WIPF1O43516 503 aa9.15□□□□□ -0.95
SCAMP4-207ENST00000472442 KRTAP24-1Q3LI83 254 aa9.15□□□□□ -0.95
SCAMP4-207ENST00000472442 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
SCAMP4-207ENST00000472442 TRAV23DV6A0A075B6W5 121 aa9.13□□□□□ -0.95
SCAMP4-207ENST00000472442 GHRHP01286 108 aa9.13□□□□□ -0.95
SCAMP4-207ENST00000472442 CYSRT1A8MQ03 144 aa9.12□□□□□ -0.95
SCAMP4-207ENST00000472442 C4orf26Q17RF5 130 aa9.12□□□□□ -0.95
SCAMP4-207ENST00000472442 A0A087WZ39 114 aa9.12□□□□□ -0.95
SCAMP4-207ENST00000472442 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
SCAMP4-207ENST00000472442 DEFB4AO15263 64 aa9.11□□□□□ -0.95
SCAMP4-207ENST00000472442 APOC4P55056 127 aa9.11□□□□□ -0.95
SCAMP4-207ENST00000472442 ENHOQ6UWT2 76 aa9.11□□□□□ -0.95
SCAMP4-207ENST00000472442 C6orf226Q5I0X4 101 aa9.1□□□□□ -0.95
SCAMP4-207ENST00000472442 S100A7L2Q5SY68 101 aa9.1□□□□□ -0.95
SCAMP4-207ENST00000472442 CMYA5Q8N3K9 4069 aa9.1□□□□□ -0.95
SCAMP4-207ENST00000472442 IGHV4-30-4P0DP06 118 aa9.1□□□□□ -0.95
SCAMP4-207ENST00000472442 ANK2Q01484 3957 aa9.1□□□□□ -0.95
SCAMP4-207ENST00000472442 PRR3P79522 188 aaKnown RBP9.09□□□□□ -0.95
SCAMP4-207ENST00000472442 OXLD1Q5BKU9 147 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms