RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 SLPIP03973 132 aa10.43□□□□□ -0.74
PCOLCE-205ENST00000472348 NMUP48645 174 aa10.43□□□□□ -0.74
PCOLCE-205ENST00000472348 CKS1BP61024 79 aa10.43□□□□□ -0.74
PCOLCE-205ENST00000472348 CARD19Q96LW7 228 aa10.42□□□□□ -0.74
PCOLCE-205ENST00000472348 PKD1P98161 4303 aa10.42□□□□□ -0.74
PCOLCE-205ENST00000472348 IGLV5-52A0A0A0MRZ9 124 aa10.41□□□□□ -0.74
PCOLCE-205ENST00000472348 SCGB1D1O95968 90 aa10.41□□□□□ -0.74
PCOLCE-205ENST00000472348 TLX1NBP0CAT3 122 aa10.41□□□□□ -0.74
PCOLCE-205ENST00000472348 HERV-K104P63124 156 aa10.41□□□□□ -0.74
PCOLCE-205ENST00000472348 TOMM7Q9P0U1 55 aa10.41□□□□□ -0.74
PCOLCE-205ENST00000472348 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.4□□□□□ -0.74
PCOLCE-205ENST00000472348 LINC00587B1AMM8 73 aa10.4□□□□□ -0.74
PCOLCE-205ENST00000472348 ZNF625Q96I27 306 aaPredicted RBP10.4□□□□□ -0.74
PCOLCE-205ENST00000472348 HSBP1L1C9JCN9 74 aa10.39□□□□□ -0.75
PCOLCE-205ENST00000472348 J3QQQ9 107 aa10.39□□□□□ -0.75
PCOLCE-205ENST00000472348 KRTAP10-2P60368 255 aa10.39□□□□□ -0.75
PCOLCE-205ENST00000472348 COX17Q14061 63 aa10.39□□□□□ -0.75
PCOLCE-205ENST00000472348 Q6ZRU5 148 aa10.39□□□□□ -0.75
PCOLCE-205ENST00000472348 DNAH11Q96DT5 4516 aa10.39□□□□□ -0.75
PCOLCE-205ENST00000472348 MYMXA0A1B0GTQ4 84 aa10.37□□□□□ -0.75
PCOLCE-205ENST00000472348 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
PCOLCE-205ENST00000472348 STPG4Q8N801 248 aa10.37□□□□□ -0.75
PCOLCE-205ENST00000472348 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
PCOLCE-205ENST00000472348 C6orf48Q9UBA6 75 aa10.37□□□□□ -0.75
PCOLCE-205ENST00000472348 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
PCOLCE-205ENST00000472348 GCSHP23434 173 aa10.36□□□□□ -0.75
PCOLCE-205ENST00000472348 PYY3Q5JQD4 70 aa10.36□□□□□ -0.75
PCOLCE-205ENST00000472348 C2orf82Q6UX34 121 aa10.36□□□□□ -0.75
PCOLCE-205ENST00000472348 NDUFA12Q9UI09 145 aa10.36□□□□□ -0.75
PCOLCE-205ENST00000472348 LOC107984640A0A0U1RRK4 108 aa10.35□□□□□ -0.75
PCOLCE-205ENST00000472348 C10orf25Q5T742 122 aa10.35□□□□□ -0.75
PCOLCE-205ENST00000472348 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
PCOLCE-205ENST00000472348 LINC00474Q9P2X8 69 aa10.35□□□□□ -0.75
PCOLCE-205ENST00000472348 HECTD4Q9Y4D8 3996 aa10.34□□□□□ -0.75
PCOLCE-205ENST00000472348 BIRC6Q9NR09 4857 aa10.34□□□□□ -0.75
PCOLCE-205ENST00000472348 NDUFC2-KCTD14E9PQ53 114 aa10.34□□□□□ -0.75
PCOLCE-205ENST00000472348 ATOH7Q8N100 152 aa10.34□□□□□ -0.75
PCOLCE-205ENST00000472348 TSPEAR-AS2P59090 65 aa10.33□□□□□ -0.76
PCOLCE-205ENST00000472348 CIRBPQ14011 172 aaKnown RBP10.33□□□□□ -0.76
PCOLCE-205ENST00000472348 ANKRD39Q53RE8 183 aa10.33□□□□□ -0.76
PCOLCE-205ENST00000472348 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
PCOLCE-205ENST00000472348 C16orf90A8MZG2 172 aa10.32□□□□□ -0.76
PCOLCE-205ENST00000472348 Q6ZSA8 131 aa10.32□□□□□ -0.76
PCOLCE-205ENST00000472348 VAMP8Q9BV40 100 aa10.31□□□□□ -0.76
PCOLCE-205ENST00000472348 ERG28Q9UKR5 140 aa10.31□□□□□ -0.76
PCOLCE-205ENST00000472348 DNAH5Q8TE73 4624 aa10.3□□□□□ -0.76
PCOLCE-205ENST00000472348 LOC105371267A0A1B0GV96 52 aa10.3□□□□□ -0.76
PCOLCE-205ENST00000472348 J3QL48 77 aa10.3□□□□□ -0.76
PCOLCE-205ENST00000472348 TIMM17BO60830 172 aa10.3□□□□□ -0.76
PCOLCE-205ENST00000472348 SMIM6P0DI80 62 aa10.3□□□□□ -0.76
PCOLCE-205ENST00000472348 DLEU1O43261 78 aa10.29□□□□□ -0.76
PCOLCE-205ENST00000472348 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
PCOLCE-205ENST00000472348 PTTG1IPP53801 180 aa10.28□□□□□ -0.76
PCOLCE-205ENST00000472348 MAJINQ3KP22 176 aa10.28□□□□□ -0.76
PCOLCE-205ENST00000472348 A0A0J9YXY3 114 aa10.27□□□□□ -0.77
PCOLCE-205ENST00000472348 Q6ZRP5 223 aa10.27□□□□□ -0.77
PCOLCE-205ENST00000472348 PPDPFQ9H3Y8 114 aa10.27□□□□□ -0.77
PCOLCE-205ENST00000472348 LOC107984156A0A0G2JMH3 177 aa10.26□□□□□ -0.77
PCOLCE-205ENST00000472348 EPM2AB3EWF7 344 aa10.26□□□□□ -0.77
PCOLCE-205ENST00000472348 COX8AP10176 69 aa10.26□□□□□ -0.77
PCOLCE-205ENST00000472348 KRTAP10-1P60331 282 aa10.26□□□□□ -0.77
PCOLCE-205ENST00000472348 S100A12P80511 92 aa10.26□□□□□ -0.77
PCOLCE-205ENST00000472348 ARL17AQ8IVW1 177 aa10.26□□□□□ -0.77
PCOLCE-205ENST00000472348 BOD1L2Q8IYS8 172 aa10.26□□□□□ -0.77
PCOLCE-205ENST00000472348 SPATA45Q537H7 98 aa10.25□□□□□ -0.77
PCOLCE-205ENST00000472348 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
PCOLCE-205ENST00000472348 MEIG1Q5JSS6 88 aa10.25□□□□□ -0.77
PCOLCE-205ENST00000472348 Q6ZVH6 145 aa10.25□□□□□ -0.77
PCOLCE-205ENST00000472348 SPACA4Q8TDM5 124 aa10.25□□□□□ -0.77
PCOLCE-205ENST00000472348 PLA2G2DQ9UNK4 145 aa10.25□□□□□ -0.77
PCOLCE-205ENST00000472348 PKHD1P08F94 4074 aa10.25□□□□□ -0.77
PCOLCE-205ENST00000472348 A0A096LNI7 61 aa10.24□□□□□ -0.77
PCOLCE-205ENST00000472348 PCP2Q8IVA1 136 aa10.24□□□□□ -0.77
PCOLCE-205ENST00000472348 LINC00528Q8N1L1 170 aa10.24□□□□□ -0.77
PCOLCE-205ENST00000472348 PAM16Q9Y3D7 125 aa10.24□□□□□ -0.77
PCOLCE-205ENST00000472348 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
PCOLCE-205ENST00000472348 TMEM238C9JI98 176 aa10.22□□□□□ -0.77
PCOLCE-205ENST00000472348 PFN2P35080 140 aa10.22□□□□□ -0.77
PCOLCE-205ENST00000472348 FUSP35637 526 aaKnown RBP eCLIP10.22□□□□□ -0.77
PCOLCE-205ENST00000472348 LINC00158P58513 81 aa10.22□□□□□ -0.77
PCOLCE-205ENST00000472348 LINC01620Q4KN68 170 aa10.22□□□□□ -0.77
PCOLCE-205ENST00000472348 DYNC1H1Q14204 4646 aaKnown RBP10.21□□□□□ -0.77
PCOLCE-205ENST00000472348 CDK2AP2O75956 126 aa10.21□□□□□ -0.77
PCOLCE-205ENST00000472348 SMIM13P0DJ93 91 aa10.21□□□□□ -0.77
PCOLCE-205ENST00000472348 GAGE2BQ13066 116 aa10.21□□□□□ -0.77
PCOLCE-205ENST00000472348 SCGB1D4Q6XE38 83 aa10.21□□□□□ -0.77
PCOLCE-205ENST00000472348 COPS9Q8WXC6 57 aa10.21□□□□□ -0.77
PCOLCE-205ENST00000472348 LITAFQ99732 161 aa10.21□□□□□ -0.77
PCOLCE-205ENST00000472348 PLAC8Q9NZF1 115 aa10.21□□□□□ -0.77
PCOLCE-205ENST00000472348 SPANXDQ9BXN6 97 aa10.2□□□□□ -0.78
PCOLCE-205ENST00000472348 TTTY13Q9BZ97 58 aa10.2□□□□□ -0.78
PCOLCE-205ENST00000472348 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
PCOLCE-205ENST00000472348 SPANXB1Q9NS25 103 aaPredicted RBP10.2□□□□□ -0.78
PCOLCE-205ENST00000472348 SPANXCQ9NY87 97 aa10.2□□□□□ -0.78
PCOLCE-205ENST00000472348 HIGD1BQ9P298 99 aa10.2□□□□□ -0.78
PCOLCE-205ENST00000472348 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.2□□□□□ -0.78
PCOLCE-205ENST00000472348 DNAH8Q96JB1 4490 aa10.19□□□□□ -0.78
PCOLCE-205ENST00000472348 IFITM1P13164 125 aa10.19□□□□□ -0.78
PCOLCE-205ENST00000472348 C9orf129Q5T035 196 aaKnown RBP10.19□□□□□ -0.78
PCOLCE-205ENST00000472348 SLC25A34Q6PIV7 304 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms