RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 WWC2-AS2Q96NR7 200 aa8.66□□□□□ -1.02
IRF1-208ENST00000472045 COX6A2Q02221 97 aa8.65□□□□□ -1.02
IRF1-208ENST00000472045 A0A096LNT2 108 aa8.65□□□□□ -1.02
IRF1-208ENST00000472045 SMIM1B2RUZ4 78 aa8.65□□□□□ -1.02
IRF1-208ENST00000472045 TCL1BO95988 128 aa8.65□□□□□ -1.02
IRF1-208ENST00000472045 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
IRF1-208ENST00000472045 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.02
IRF1-208ENST00000472045 WDFY4Q6ZS81 3184 aa8.65□□□□□ -1.02
IRF1-208ENST00000472045 TAX1BP3O14907 124 aa8.65□□□□□ -1.03
IRF1-208ENST00000472045 HRCT1Q6UXD1 115 aa8.65□□□□□ -1.03
IRF1-208ENST00000472045 SS18L2Q9UHA2 77 aa8.65□□□□□ -1.03
IRF1-208ENST00000472045 F8WDY8 70 aa8.65□□□□□ -1.03
IRF1-208ENST00000472045 CHKB-CPT1BH3BT56 60 aa8.64□□□□□ -1.03
IRF1-208ENST00000472045 Q6ZQY7 126 aa8.64□□□□□ -1.03
IRF1-208ENST00000472045 WFDC2Q14508 124 aa8.64□□□□□ -1.03
IRF1-208ENST00000472045 YPEL4Q96NS1 127 aa8.64□□□□□ -1.03
IRF1-208ENST00000472045 COL27A1Q8IZC6 1860 aaPredicted RBP8.64□□□□□ -1.03
IRF1-208ENST00000472045 X6R8D5 127 aa8.64□□□□□ -1.03
IRF1-208ENST00000472045 SZT2Q5T011 3432 aa8.63□□□□□ -1.03
IRF1-208ENST00000472045 C2orf48Q96LS8 159 aa8.63□□□□□ -1.03
IRF1-208ENST00000472045 ESRGQ1W209 222 aa8.63□□□□□ -1.03
IRF1-208ENST00000472045 HELZ2Q9BYK8 2649 aaKnown RBP8.62□□□□□ -1.03
IRF1-208ENST00000472045 LINC01556Q5JQF7 62 aa8.62□□□□□ -1.03
IRF1-208ENST00000472045 UPK3BQ9BT76 320 aa8.62□□□□□ -1.03
IRF1-208ENST00000472045 TRIAP1O43715 76 aa8.62□□□□□ -1.03
IRF1-208ENST00000472045 C1orf137Q5JT78 98 aa8.62□□□□□ -1.03
IRF1-208ENST00000472045 REG3GQ6UW15 175 aa8.62□□□□□ -1.03
IRF1-208ENST00000472045 SPATA3Q8NHX4 192 aa8.62□□□□□ -1.03
IRF1-208ENST00000472045 NDUFC2-KCTD14E9PQ53 114 aa8.61□□□□□ -1.03
IRF1-208ENST00000472045 CCKP06307 115 aa8.61□□□□□ -1.03
IRF1-208ENST00000472045 IGKV4-1P06312 121 aa8.61□□□□□ -1.03
IRF1-208ENST00000472045 SMIM11BQ8TCY0 68 aa8.6□□□□□ -1.03
IRF1-208ENST00000472045 TP73-AS1Q9UF72 201 aa8.6□□□□□ -1.03
IRF1-208ENST00000472045 H3BNG1 76 aa8.6□□□□□ -1.03
IRF1-208ENST00000472045 AMELXQ99217 191 aa8.59□□□□□ -1.03
IRF1-208ENST00000472045 AGRNO00468 2067 aa8.59□□□□□ -1.03
IRF1-208ENST00000472045 MGAQ8IWI9 3026 aa8.59□□□□□ -1.03
IRF1-208ENST00000472045 FAM19A4Q96LR4 140 aa8.58□□□□□ -1.04
IRF1-208ENST00000472045 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
IRF1-208ENST00000472045 CFAP46Q8IYW2 2715 aa8.57□□□□□ -1.04
IRF1-208ENST00000472045 Q8NAQ8 132 aa8.57□□□□□ -1.04
IRF1-208ENST00000472045 C10orf25Q5T742 122 aa8.57□□□□□ -1.04
IRF1-208ENST00000472045 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.57□□□□□ -1.04
IRF1-208ENST00000472045 C3orf84H3BNL1 204 aa8.57□□□□□ -1.04
IRF1-208ENST00000472045 Q6ZRU5 148 aa8.56□□□□□ -1.04
IRF1-208ENST00000472045 MRPL55Q7Z7F7 128 aaKnown RBP8.56□□□□□ -1.04
IRF1-208ENST00000472045 KIF25-AS1Q9Y6Z4 181 aa8.56□□□□□ -1.04
IRF1-208ENST00000472045 LINC01561Q8N1V8 128 aa8.56□□□□□ -1.04
IRF1-208ENST00000472045 CIRBP-AS1Q8TBR5 109 aa8.55□□□□□ -1.04
IRF1-208ENST00000472045 KRTAP1-3Q8IUG1 177 aa8.55□□□□□ -1.04
IRF1-208ENST00000472045 K7EIL1 84 aa8.55□□□□□ -1.04
IRF1-208ENST00000472045 NBDYA0A0U1RRE5 68 aa8.54□□□□□ -1.04
IRF1-208ENST00000472045 SCXQ7RTU7 201 aa8.54□□□□□ -1.04
IRF1-208ENST00000472045 URB1-AS1Q96HZ7 61 aa8.54□□□□□ -1.04
IRF1-208ENST00000472045 ATOX1O00244 68 aa8.53□□□□□ -1.04
IRF1-208ENST00000472045 LINC00315P59091 139 aa8.53□□□□□ -1.04
IRF1-208ENST00000472045 KLK9Q2XQG4 91 aa8.53□□□□□ -1.04
IRF1-208ENST00000472045 KRTAP10-11P60412 298 aa8.52□□□□□ -1.04
IRF1-208ENST00000472045 PRR3P79522 188 aaKnown RBP8.52□□□□□ -1.04
IRF1-208ENST00000472045 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.05
IRF1-208ENST00000472045 TEX49A0A1B0GTD5 131 aa8.52□□□□□ -1.05
IRF1-208ENST00000472045 FAM236AA0A1B0GUQ0 79 aa8.51□□□□□ -1.05
IRF1-208ENST00000472045 FAM236BA0A1B0GV22 79 aa8.51□□□□□ -1.05
IRF1-208ENST00000472045 DSPP15924 2871 aaKnown RBP8.51□□□□□ -1.05
IRF1-208ENST00000472045 CASC2Q6XLA1 102 aa8.51□□□□□ -1.05
IRF1-208ENST00000472045 LINC00643Q86TS7 51 aa8.51□□□□□ -1.05
IRF1-208ENST00000472045 COL6A3P12111 3177 aa8.51□□□□□ -1.05
IRF1-208ENST00000472045 PRYO14603 147 aa8.51□□□□□ -1.05
IRF1-208ENST00000472045 NDUFV3P56181 108 aaKnown RBP8.51□□□□□ -1.05
IRF1-208ENST00000472045 NTM-AS1Q6ZSK4 140 aa8.5□□□□□ -1.05
IRF1-208ENST00000472045 KRTAP10-3P60369 221 aa8.5□□□□□ -1.05
IRF1-208ENST00000472045 LINC00588Q9Y4M8 146 aa8.5□□□□□ -1.05
IRF1-208ENST00000472045 C16orf90A8MZG2 172 aa8.5□□□□□ -1.05
IRF1-208ENST00000472045 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
IRF1-208ENST00000472045 LST1O00453 97 aa8.49□□□□□ -1.05
IRF1-208ENST00000472045 KRTAP1-1Q07627 177 aa8.49□□□□□ -1.05
IRF1-208ENST00000472045 C2orf91Q6ZV80 131 aa8.49□□□□□ -1.05
IRF1-208ENST00000472045 FAM229AH3BQW9 127 aa8.48□□□□□ -1.05
IRF1-208ENST00000472045 NDUFC2O95298 119 aa8.47□□□□□ -1.05
IRF1-208ENST00000472045 C22orf24Q9Y442 160 aa8.47□□□□□ -1.05
IRF1-208ENST00000472045 LINC00310P59036 64 aa8.47□□□□□ -1.05
IRF1-208ENST00000472045 ATP5EP2Q5VTU8 51 aa8.47□□□□□ -1.05
IRF1-208ENST00000472045 USP24Q9UPU5 2620 aa8.47□□□□□ -1.05
IRF1-208ENST00000472045 RTL8CO15255 209 aa8.46□□□□□ -1.05
IRF1-208ENST00000472045 Q9BRP9 147 aa8.46□□□□□ -1.06
IRF1-208ENST00000472045 B5MCH6 92 aa8.46□□□□□ -1.06
IRF1-208ENST00000472045 VCANP13611 3396 aa8.46□□□□□ -1.06
IRF1-208ENST00000472045 MGAM2Q2M2H8 2515 aa8.45□□□□□ -1.06
IRF1-208ENST00000472045 TMEM258P61165 79 aa8.45□□□□□ -1.06
IRF1-208ENST00000472045 C19orf73Q9NVV2 129 aa8.45□□□□□ -1.06
IRF1-208ENST00000472045 A0A096LNJ9 63 aa8.45□□□□□ -1.06
IRF1-208ENST00000472045 ADAMTSL4-AS1Q5T5F5 129 aa8.45□□□□□ -1.06
IRF1-208ENST00000472045 Q6JHZ5 121 aa8.45□□□□□ -1.06
IRF1-208ENST00000472045 PRLHP81277 87 aa8.45□□□□□ -1.06
IRF1-208ENST00000472045 ENHOQ6UWT2 76 aa8.45□□□□□ -1.06
IRF1-208ENST00000472045 WFDC13Q8IUB5 93 aa8.45□□□□□ -1.06
IRF1-208ENST00000472045 MAST4O15021 2626 aa8.44□□□□□ -1.06
IRF1-208ENST00000472045 IGHV3OR16-9A0A0B4J2B5 98 aa8.44□□□□□ -1.06
IRF1-208ENST00000472045 SDIM1Q6ZPB5 146 aa8.44□□□□□ -1.06
IRF1-208ENST00000472045 Q8N814 137 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 229.7 ms