RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ANKRD39Q53RE8 183 aa7.23□□□□□ -1.25
VCP-204ENST00000466100 C10orf25Q5T742 122 aa7.23□□□□□ -1.25
VCP-204ENST00000466100 TOMM7Q9P0U1 55 aa7.23□□□□□ -1.25
VCP-204ENST00000466100 IGKV2D-26A0A0A0MRZ7 120 aa7.22□□□□□ -1.25
VCP-204ENST00000466100 PRSS2P07478 247 aa7.22□□□□□ -1.25
VCP-204ENST00000466100 FUSP35637 526 aaKnown RBP eCLIP7.22□□□□□ -1.25
VCP-204ENST00000466100 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
VCP-204ENST00000466100 UNQ6190/PRO20217Q6UXQ8 127 aa7.22□□□□□ -1.25
VCP-204ENST00000466100 Q6ZRU5 148 aa7.22□□□□□ -1.25
VCP-204ENST00000466100 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
VCP-204ENST00000466100 ZNF625Q96I27 306 aaPredicted RBP7.22□□□□□ -1.25
VCP-204ENST00000466100 J3QQQ9 107 aa7.21□□□□□ -1.26
VCP-204ENST00000466100 NDUFA1O15239 70 aa7.21□□□□□ -1.26
VCP-204ENST00000466100 CXCL5P42830 114 aa7.21□□□□□ -1.26
VCP-204ENST00000466100 SYCNQ0VAF6 134 aa7.21□□□□□ -1.26
VCP-204ENST00000466100 C6orf226Q5I0X4 101 aa7.21□□□□□ -1.26
VCP-204ENST00000466100 CDPF1Q6NVV7 123 aa7.21□□□□□ -1.26
VCP-204ENST00000466100 CARD19Q96LW7 228 aa7.21□□□□□ -1.26
VCP-204ENST00000466100 CAMK2N2Q96S95 79 aa7.21□□□□□ -1.26
VCP-204ENST00000466100 C6orf48Q9UBA6 75 aa7.21□□□□□ -1.26
VCP-204ENST00000466100 C9orf163Q8N9P6 203 aa7.2□□□□□ -1.26
VCP-204ENST00000466100 TRBV30A0A0K0K1B3 111 aa7.19□□□□□ -1.26
VCP-204ENST00000466100 CKS1BP61024 79 aa7.19□□□□□ -1.26
VCP-204ENST00000466100 RNF151Q2KHN1 245 aa7.19□□□□□ -1.26
VCP-204ENST00000466100 LCE2DQ5TA82 110 aaPredicted RBP7.19□□□□□ -1.26
VCP-204ENST00000466100 PGPEP1Q9NXJ5 209 aa7.19□□□□□ -1.26
VCP-204ENST00000466100 IGLV5-52A0A0A0MRZ9 124 aa7.18□□□□□ -1.26
VCP-204ENST00000466100 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
VCP-204ENST00000466100 SFTA2Q6UW10 78 aa7.18□□□□□ -1.26
VCP-204ENST00000466100 NDUFA12Q9UI09 145 aa7.18□□□□□ -1.26
VCP-204ENST00000466100 HSBP1L1C9JCN9 74 aa7.17□□□□□ -1.26
VCP-204ENST00000466100 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
VCP-204ENST00000466100 NMUP48645 174 aa7.17□□□□□ -1.26
VCP-204ENST00000466100 LINC01620Q4KN68 170 aa7.17□□□□□ -1.26
VCP-204ENST00000466100 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
VCP-204ENST00000466100 TTTY13Q9BZ97 58 aa7.17□□□□□ -1.26
VCP-204ENST00000466100 TLX1NBP0CAT3 122 aa7.16□□□□□ -1.26
VCP-204ENST00000466100 SDIM1Q6ZPB5 146 aa7.16□□□□□ -1.26
VCP-204ENST00000466100 PCP2Q8IVA1 136 aa7.16□□□□□ -1.26
VCP-204ENST00000466100 VAMP8Q9BV40 100 aa7.16□□□□□ -1.26
VCP-204ENST00000466100 MYMXA0A1B0GTQ4 84 aa7.15□□□□□ -1.26
VCP-204ENST00000466100 SMIM6P0DI80 62 aa7.15□□□□□ -1.26
VCP-204ENST00000466100 PAM16Q9Y3D7 125 aa7.15□□□□□ -1.26
VCP-204ENST00000466100 HSPG2P98160 4391 aa7.15□□□□□ -1.27
VCP-204ENST00000466100 ZNF815PA8K554 130 aa7.14□□□□□ -1.27
VCP-204ENST00000466100 RYR1P21817 5038 aa7.14□□□□□ -1.27
VCP-204ENST00000466100 GCSHP23434 173 aa7.14□□□□□ -1.27
VCP-204ENST00000466100 KRTAP10-1P60331 282 aa7.14□□□□□ -1.27
VCP-204ENST00000466100 HERV-K104P63124 156 aa7.14□□□□□ -1.27
VCP-204ENST00000466100 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
VCP-204ENST00000466100 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
VCP-204ENST00000466100 A0A0J9YXY3 114 aa7.13□□□□□ -1.27
VCP-204ENST00000466100 LOC107984640A0A0U1RRK4 108 aa7.13□□□□□ -1.27
VCP-204ENST00000466100 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
VCP-204ENST00000466100 Q6ZRP5 223 aa7.13□□□□□ -1.27
VCP-204ENST00000466100 TP73-AS1Q9UF72 201 aa7.13□□□□□ -1.27
VCP-204ENST00000466100 ERG28Q9UKR5 140 aa7.13□□□□□ -1.27
VCP-204ENST00000466100 A0A096LNI7 61 aa7.12□□□□□ -1.27
VCP-204ENST00000466100 C16orf90A8MZG2 172 aa7.12□□□□□ -1.27
VCP-204ENST00000466100 PANO1I0J062 215 aa7.12□□□□□ -1.27
VCP-204ENST00000466100 COX8AP10176 69 aa7.12□□□□□ -1.27
VCP-204ENST00000466100 COX17Q14061 63 aa7.12□□□□□ -1.27
VCP-204ENST00000466100 Q6ZSA8 131 aa7.12□□□□□ -1.27
VCP-204ENST00000466100 FAT1Q14517 4588 aa7.11□□□□□ -1.27
VCP-204ENST00000466100 SMIM13P0DJ93 91 aa7.11□□□□□ -1.27
VCP-204ENST00000466100 PTTG1IPP53801 180 aa7.11□□□□□ -1.27
VCP-204ENST00000466100 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
VCP-204ENST00000466100 BOD1L2Q8IYS8 172 aa7.11□□□□□ -1.27
VCP-204ENST00000466100 LITAFQ99732 161 aa7.11□□□□□ -1.27
VCP-204ENST00000466100 PKIGQ9Y2B9 76 aa7.11□□□□□ -1.27
VCP-204ENST00000466100 DLEU1O43261 78 aa7.1□□□□□ -1.27
VCP-204ENST00000466100 TIMM17BO60830 172 aa7.1□□□□□ -1.27
VCP-204ENST00000466100 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
VCP-204ENST00000466100 PFN2P35080 140 aa7.1□□□□□ -1.27
VCP-204ENST00000466100 RPL18AQ02543 176 aaKnown RBP7.1□□□□□ -1.27
VCP-204ENST00000466100 FAM30AQ9NZY2 134 aa7.1□□□□□ -1.27
VCP-204ENST00000466100 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.1□□□□□ -1.27
VCP-204ENST00000466100 KIAA1109Q2LD37 5005 aa7.09□□□□□ -1.27
VCP-204ENST00000466100 MEIG1Q5JSS6 88 aa7.09□□□□□ -1.27
VCP-204ENST00000466100 C9orf129Q5T035 196 aaKnown RBP7.09□□□□□ -1.27
VCP-204ENST00000466100 ADAMTSL4-AS1Q5T5F5 129 aa7.09□□□□□ -1.27
VCP-204ENST00000466100 SPACA4Q8TDM5 124 aa7.09□□□□□ -1.27
VCP-204ENST00000466100 C14orf144Q96I85 54 aa7.09□□□□□ -1.27
VCP-204ENST00000466100 VPS13BQ7Z7G8 4022 aa7.08□□□□□ -1.28
VCP-204ENST00000466100 IGKV2-24A0A0C4DH68 120 aa7.08□□□□□ -1.28
VCP-204ENST00000466100 A0A0U1RRA0 63 aa7.08□□□□□ -1.28
VCP-204ENST00000466100 LINC00587B1AMM8 73 aa7.08□□□□□ -1.28
VCP-204ENST00000466100 LINC00158P58513 81 aa7.08□□□□□ -1.28
VCP-204ENST00000466100 GAGE2BQ13066 116 aa7.08□□□□□ -1.28
VCP-204ENST00000466100 GAGE2EQ4V326 116 aa7.08□□□□□ -1.28
VCP-204ENST00000466100 SND1-IT1Q9HBX3 110 aa7.08□□□□□ -1.28
VCP-204ENST00000466100 GAGE2DQ9UEU5 116 aa7.08□□□□□ -1.28
VCP-204ENST00000466100 EPM2AB3EWF7 344 aa7.07□□□□□ -1.28
VCP-204ENST00000466100 S100A12P80511 92 aa7.07□□□□□ -1.28
VCP-204ENST00000466100 SLC25A34Q6PIV7 304 aa7.07□□□□□ -1.28
VCP-204ENST00000466100 MIR7-3HGQ8N6C7 128 aa7.07□□□□□ -1.28
VCP-204ENST00000466100 DAND5Q8N907 189 aa7.07□□□□□ -1.28
VCP-204ENST00000466100 C12orf57Q99622 126 aa7.07□□□□□ -1.28
VCP-204ENST00000466100 XAGE1AQ9HD64 81 aa7.07□□□□□ -1.28
VCP-204ENST00000466100 SCGB1D4Q6XE38 83 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms