RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ZNF563Q8TA94 476 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 TRBV10-1A0A0K0K1A3 114 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 CLPSL1A2RUU4 121 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 PIRTP0C851 137 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 PDCD10Q9BUL8 212 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 CDC42SE1Q9NRR8 79 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 U3KQA8 63 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 TCHHQ07283 1943 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 BBIP1A8MTZ0 92 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 PPP3R1P63098 170 aa1.12□□□□□ -2.23
SMC4-203ENST00000462668 OOSP1A8MZH6 123 aa1.11□□□□□ -2.23
SMC4-203ENST00000462668 KLK9Q9UKQ9 250 aa1.11□□□□□ -2.23
SMC4-203ENST00000462668 TRGV2A0A075B6R0 118 aa1.11□□□□□ -2.23
SMC4-203ENST00000462668 C20orf202A1L168 122 aa1.11□□□□□ -2.23
SMC4-203ENST00000462668 TPPP2P59282 170 aa1.11□□□□□ -2.23
SMC4-203ENST00000462668 C9orf116Q5BN46 136 aaPredicted RBP1.11□□□□□ -2.23
SMC4-203ENST00000462668 IGLV3-32A0A0A0MS00 114 aa1.11□□□□□ -2.23
SMC4-203ENST00000462668 H3BQ15 152 aa1.11□□□□□ -2.23
SMC4-203ENST00000462668 NDUFB6O95139 128 aa1.11□□□□□ -2.23
SMC4-203ENST00000462668 LIMD2Q9BT23 127 aa1.11□□□□□ -2.23
SMC4-203ENST00000462668 JMJD7-PLA2G4BH0Y9G9 81 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 GDF5OSQ5U4N7 250 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 SLC48A1Q6P1K1 146 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 MED12LQ86YW9 2145 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 COPS9Q8WXC6 57 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 PTPRZ1P23471 2315 aaPredicted RBP1.1□□□□□ -2.23
SMC4-203ENST00000462668 KLF7O75840 302 aaPredicted RBP1.1□□□□□ -2.23
SMC4-203ENST00000462668 S100A8P05109 93 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 LCE3AQ5TA76 89 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 ABCA2Q9BZC7 2435 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 DOPEY2Q9Y3R5 2298 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 TMEM30CPA0ZSE6 113 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 H3BRM9 83 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 UBE2D1P51668 147 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 HSD52Q0P140 79 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 MRPL57Q9BQC6 102 aaKnown RBP1.1□□□□□ -2.23
SMC4-203ENST00000462668 DPH3P1Q9H4G8 78 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 TMEM242Q9NWH2 141 aa1.1□□□□□ -2.23
SMC4-203ENST00000462668 A0A087WTM6 91 aa1.09□□□□□ -2.23
SMC4-203ENST00000462668 F8W1H4 67 aa1.09□□□□□ -2.23
SMC4-203ENST00000462668 MUC4Q99102 2169 aa1.09□□□□□ -2.23
SMC4-203ENST00000462668 LOC107984156A0A0G2JMH3 177 aa1.09□□□□□ -2.24
SMC4-203ENST00000462668 NPC2P61916 151 aa1.09□□□□□ -2.24
SMC4-203ENST00000462668 ARL17AQ8IVW1 177 aa1.09□□□□□ -2.24
SMC4-203ENST00000462668 F8P00451 2351 aa1.09□□□□□ -2.24
SMC4-203ENST00000462668 CCL8P80075 99 aa1.09□□□□□ -2.24
SMC4-203ENST00000462668 RIF1Q5UIP0 2472 aaKnown RBP1.09□□□□□ -2.24
SMC4-203ENST00000462668 KIAA2026Q5HYC2 2103 aa1.08□□□□□ -2.24
SMC4-203ENST00000462668 IFNA17P01571 189 aa1.08□□□□□ -2.24
SMC4-203ENST00000462668 C5orf38Q86SI9 138 aa1.08□□□□□ -2.24
SMC4-203ENST00000462668 AQP10Q96PS8 301 aa1.08□□□□□ -2.24
SMC4-203ENST00000462668 CBLN1P23435 193 aa1.08□□□□□ -2.24
SMC4-203ENST00000462668 TFF3Q07654 80 aa1.08□□□□□ -2.24
SMC4-203ENST00000462668 IQCJQ1A5X6 159 aa1.08□□□□□ -2.24
SMC4-203ENST00000462668 FAM74A1Q5RGS3 127 aa1.08□□□□□ -2.24
SMC4-203ENST00000462668 MRPL36Q9P0J6 103 aaKnown RBP1.08□□□□□ -2.24
SMC4-203ENST00000462668 A0A096LNT2 108 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 FLNAP21333 2647 aaKnown RBP1.07□□□□□ -2.24
SMC4-203ENST00000462668 TEX49A0A1B0GTD5 131 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 IGKCP01834 107 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 FREM3P0C091 2139 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 MPC2O95563 127 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 KRTAP10-4P60372 401 aaPredicted RBP1.07□□□□□ -2.24
SMC4-203ENST00000462668 C10orf105Q8TEF2 133 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 ATG5Q9H1Y0 275 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 LPAP08519 4548 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 IGKV3D-7A0A0C4DH55 119 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 IGKV3OR2-268A0A0C4DH90 116 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 TMEM262E9PQX1 116 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 LCE1CQ5T751 118 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 LCE1BQ5T7P3 118 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 ZNF818PQ6ZRF7 136 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 DEFB124Q8NES8 71 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 SPTSSAQ969W0 71 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 LINC00312Q9Y6C7 94 aa1.07□□□□□ -2.24
SMC4-203ENST00000462668 NAV3Q8IVL0 2385 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 IL5P05113 134 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 IFITM1P13164 125 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 TSKUQ8WUA8 353 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 LINC00846Q9NV44 126 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 SRRM2Q9UQ35 2752 aaKnown RBP1.06□□□□□ -2.24
SMC4-203ENST00000462668 PPYP01298 95 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 INSL4Q14641 139 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 C8orf59Q8N0T1 100 aaPredicted RBP1.06□□□□□ -2.24
SMC4-203ENST00000462668 C5orf56Q8N8D9 126 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 DSCR8Q96T75 97 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 TRBV10-3A0A0K0K1G6 114 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 APOC4-APOC2K7ER74 178 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 APOC2P02655 101 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 POLR2JP52435 117 aaKnown RBP1.06□□□□□ -2.24
SMC4-203ENST00000462668 OBSCN-AS1Q96MR7 158 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 MYO9BQ13459 2157 aa1.06□□□□□ -2.24
SMC4-203ENST00000462668 PCNX1Q96RV3 2341 aa1.05□□□□□ -2.24
SMC4-203ENST00000462668 ICE1Q9Y2F5 2266 aa1.05□□□□□ -2.24
SMC4-203ENST00000462668 KRTAP12-3P60328 96 aa1.05□□□□□ -2.24
SMC4-203ENST00000462668 SNHG12Q9BXW3 62 aa1.05□□□□□ -2.24
SMC4-203ENST00000462668 MYOFQ9NZM1 2061 aa1.05□□□□□ -2.24
SMC4-203ENST00000462668 MRPL54Q6P161 138 aaKnown RBP1.05□□□□□ -2.24
SMC4-203ENST00000462668 COMMD6Q7Z4G1 85 aa1.05□□□□□ -2.24
SMC4-203ENST00000462668 IFI27L1Q96BM0 104 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms