RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TRBV19A0A075B6N1 114 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 A0A096LNJ9 63 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 TRBV6-1A0A0K0K1D8 114 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 hADV29S1A0JD25 119 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 LINC01549A6NIU2 74 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 F6UB75 175 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 H3BRN7 92 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 COX7A2P2O60397 106 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 LTAP01374 205 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 GATA1P15976 413 aaPredicted RBP3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 DEFB131AP59861 70 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 RPL18AQ02543 176 aaKnown RBP3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 ZNF56Q15929 161 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 FAM104BQ5XKR9 115 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 RNF182Q8N6D2 247 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 Q8NBF4 154 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 PAXXQ9BUH6 204 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 OCR1Q9BZK8 76 aa3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 KLK5Q9Y337 293 aaPredicted RBP3.41□□□□□ -1.86
ATPAF1-203ENST00000460928 TRAV12-1A0A0B4J245 112 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 A0A0B4J2C4 111 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 H3BVH4 76 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 PEX7O00628 323 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 MRPS12O15235 138 aaKnown RBP3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 FXYD7P58549 80 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 ZC2HC1BQ5TFG8 222 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 C10orf113Q5VZT2 155 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 LINC00305Q7Z4B0 112 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 MRPL55Q7Z7F7 128 aaKnown RBP3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 DAND5Q8N907 189 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 DCANP1Q8TF63 244 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 FAM167A-AS1Q96KT0 104 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 CSMD3Q7Z407 3707 aa3.4□□□□□ -1.87
ATPAF1-203ENST00000460928 IGKV2D-26A0A0A0MRZ7 120 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 TRBV30A0A0K0K1B3 111 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 A0A1B0GUT8 65 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 RPL37AP8A6NKH3 93 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 SOCS3O14543 225 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 P01737 135 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 PRM2P04554 102 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 FCER1GP30273 86 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 HERVK_113P61574 105 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 ORMDL3Q8N138 153 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 FMC1Q96HJ9 113 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 VSIG2Q96IQ7 327 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 DSCR8Q96T75 97 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 PRO1854Q9UHT4 67 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 LYSTQ99698 3801 aa3.39□□□□□ -1.87
ATPAF1-203ENST00000460928 PLAC8L1A1L4L8 177 aa3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 M0R3E3 92 aa3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 NDUFC1O43677 76 aa3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 GIG44P09565 113 aaPredicted RBP3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 IFI27P40305 119 aaPredicted RBP3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 C2orf82Q6UX34 121 aa3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 ZFP2Q6ZN57 461 aa3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 LINC01561Q8N1V8 128 aa3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 Q8N8P6 123 aa3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 OPRPNQ99935 248 aaPredicted RBP3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 DYNC2H1Q8NCM8 4307 aaKnown RBP3.38□□□□□ -1.87
ATPAF1-203ENST00000460928 TMSB15BA0A087X1C1 80 aa3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 K7EMI3 77 aa3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 DEFB4AO15263 64 aa3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 COX6CP09669 75 aa3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 INAFM2P0DMQ5 153 aa3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 ERCC8Q13216 396 aa3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 Q6JHZ5 121 aa3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 LINC00322Q6ZN03 302 aaPredicted RBP3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 FXYD5Q96DB9 178 aa3.37□□□□□ -1.87
ATPAF1-203ENST00000460928 IGHV3OR16-12A0A075B7B8 117 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 IGKV2-40A0A087WW87 121 aaPredicted RBP3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 IGHV3-16A0A0C4DH30 117 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 IGHV1-58A0A0C4DH39 117 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 LCE6AA0A183 80 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 TEX49A0A1B0GTD5 131 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 LYRM9A8MSI8 78 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 F8VRH5 84 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 IGKV2D-40P01614 121 aaPredicted RBP3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 TCRAP04437 139 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 DEFB135Q30KP9 77 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 ATP5EP2Q5VTU8 51 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 CEMP1Q6PRD7 247 aaPredicted RBP3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 REG3GQ6UW15 175 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 OTORQ9NRC9 128 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 XCL2Q9UBD3 114 aa3.36□□□□□ -1.87
ATPAF1-203ENST00000460928 A0A0J9YX75 114 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 C3orf84H3BNL1 204 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 IGHV3-33P01772 117 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 RBMY1A1P0DJD3 496 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 RBMY1CP0DJD4 496 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 SPINK13Q1W4C9 94 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 S100A7L2Q5SY68 101 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 PRR9Q5T870 116 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 Q8TAT8 98 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 PGLYRP4Q96LB8 373 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 B9D2Q9BPU9 175 aa3.35□□□□□ -1.87
ATPAF1-203ENST00000460928 TMEM243Q9BU79 118 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms