RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 WFDC9Q8NEX5 89 aa12.45□□□□□ -0.42
CHRD-208ENST00000460627 ZNF73O43830 326 aaPredicted RBP12.44□□□□□ -0.42
CHRD-208ENST00000460627 USP17L23D6RBM5 183 aa12.44□□□□□ -0.42
CHRD-208ENST00000460627 CELA1Q9UNI1 258 aa12.44□□□□□ -0.42
CHRD-208ENST00000460627 A0A096LNI7 61 aa12.42□□□□□ -0.42
CHRD-208ENST00000460627 TEX49A0A1B0GTD5 131 aa12.42□□□□□ -0.42
CHRD-208ENST00000460627 BPY2O14599 106 aa12.42□□□□□ -0.42
CHRD-208ENST00000460627 TSPEAR-AS2P59090 65 aa12.42□□□□□ -0.42
CHRD-208ENST00000460627 C2orf48Q96LS8 159 aa12.42□□□□□ -0.42
CHRD-208ENST00000460627 X6R8D5 127 aa12.42□□□□□ -0.42
CHRD-208ENST00000460627 MP68P56378 58 aa12.41□□□□□ -0.42
CHRD-208ENST00000460627 LAMA3Q16787 3333 aa12.41□□□□□ -0.42
CHRD-208ENST00000460627 ZNF706Q9Y5V0 76 aaPredicted RBP12.41□□□□□ -0.42
CHRD-208ENST00000460627 LRCOL1A6NCL2 159 aa12.4□□□□□ -0.42
CHRD-208ENST00000460627 FAM236AA0A1B0GUQ0 79 aa12.4□□□□□ -0.42
CHRD-208ENST00000460627 FAM236BA0A1B0GV22 79 aa12.4□□□□□ -0.42
CHRD-208ENST00000460627 LINC01546A6NGU7 62 aa12.39□□□□□ -0.43
CHRD-208ENST00000460627 H0Y9J4 135 aa12.39□□□□□ -0.43
CHRD-208ENST00000460627 C9orf116Q5BN46 136 aaPredicted RBP12.39□□□□□ -0.43
CHRD-208ENST00000460627 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.39□□□□□ -0.43
CHRD-208ENST00000460627 SMIM20Q8N5G0 67 aa12.39□□□□□ -0.43
CHRD-208ENST00000460627 H3BNG1 76 aa12.38□□□□□ -0.43
CHRD-208ENST00000460627 FLNAP21333 2647 aaKnown RBP12.38□□□□□ -0.43
CHRD-208ENST00000460627 RPL37AP8A6NKH3 93 aa12.37□□□□□ -0.43
CHRD-208ENST00000460627 NDUFC2-KCTD14E9PQ53 114 aa12.37□□□□□ -0.43
CHRD-208ENST00000460627 NTM-AS1Q6ZSK4 140 aa12.36□□□□□ -0.43
CHRD-208ENST00000460627 C6orf223Q8N319 242 aa12.36□□□□□ -0.43
CHRD-208ENST00000460627 CCKP06307 115 aa12.36□□□□□ -0.43
CHRD-208ENST00000460627 ATP5EP2Q5VTU8 51 aa12.35□□□□□ -0.43
CHRD-208ENST00000460627 M0QXV9 152 aa12.35□□□□□ -0.43
CHRD-208ENST00000460627 LINC01556Q5JQF7 62 aa12.35□□□□□ -0.43
CHRD-208ENST00000460627 CENPEQ02224 2701 aa12.35□□□□□ -0.43
CHRD-208ENST00000460627 RPL28P46779 137 aaKnown RBP12.35□□□□□ -0.43
CHRD-208ENST00000460627 CFAP46Q8IYW2 2715 aa12.34□□□□□ -0.43
CHRD-208ENST00000460627 MGAM2Q2M2H8 2515 aa12.34□□□□□ -0.43
CHRD-208ENST00000460627 PLAC8L1A1L4L8 177 aa12.34□□□□□ -0.43
CHRD-208ENST00000460627 NDUFC2O95298 119 aa12.34□□□□□ -0.43
CHRD-208ENST00000460627 ADAMTSL4-AS1Q5T5F5 129 aa12.33□□□□□ -0.44
CHRD-208ENST00000460627 ITPR3Q14573 2671 aa12.33□□□□□ -0.44
CHRD-208ENST00000460627 IGHV3OR16-9A0A0B4J2B5 98 aa12.33□□□□□ -0.44
CHRD-208ENST00000460627 TRBV10-3A0A0K0K1G6 114 aa12.33□□□□□ -0.44
CHRD-208ENST00000460627 SBSPONQ8IVN8 264 aa12.32□□□□□ -0.44
CHRD-208ENST00000460627 C1orf134Q5TEV5 83 aa12.31□□□□□ -0.44
CHRD-208ENST00000460627 USP24Q9UPU5 2620 aa12.31□□□□□ -0.44
CHRD-208ENST00000460627 IGLV5-39A0A0G2JS06 123 aa12.31□□□□□ -0.44
CHRD-208ENST00000460627 A8MTW9 85 aa12.31□□□□□ -0.44
CHRD-208ENST00000460627 PPDPFQ9H3Y8 114 aa12.31□□□□□ -0.44
CHRD-208ENST00000460627 Q8NAQ8 132 aa12.3□□□□□ -0.44
CHRD-208ENST00000460627 BPTFQ12830 3046 aa12.3□□□□□ -0.44
CHRD-208ENST00000460627 ESRGQ1W209 222 aa12.3□□□□□ -0.44
CHRD-208ENST00000460627 SS18L2Q9UHA2 77 aa12.3□□□□□ -0.44
CHRD-208ENST00000460627 KRTAP1-3Q8IUG1 177 aa12.3□□□□□ -0.44
CHRD-208ENST00000460627 UPK3BQ9BT76 320 aa12.29□□□□□ -0.44
CHRD-208ENST00000460627 IGLV5-52A0A0A0MRZ9 124 aa12.29□□□□□ -0.44
CHRD-208ENST00000460627 ATRQ13535 2644 aa12.28□□□□□ -0.44
CHRD-208ENST00000460627 Q6ZRU5 148 aa12.26□□□□□ -0.45
CHRD-208ENST00000460627 NDUFV3P56181 108 aaKnown RBP12.26□□□□□ -0.45
CHRD-208ENST00000460627 PRR3P79522 188 aaKnown RBP12.25□□□□□ -0.45
CHRD-208ENST00000460627 REG3GQ6UW15 175 aa12.25□□□□□ -0.45
CHRD-208ENST00000460627 Q9UF83 564 aa12.24□□□□□ -0.45
CHRD-208ENST00000460627 IGLV5-45A0A087WSX0 123 aa12.24□□□□□ -0.45
CHRD-208ENST00000460627 Q8N814 137 aa12.23□□□□□ -0.45
CHRD-208ENST00000460627 B5MCH6 92 aa12.22□□□□□ -0.45
CHRD-208ENST00000460627 C3orf84H3BNL1 204 aa12.22□□□□□ -0.45
CHRD-208ENST00000460627 SDIM1Q6ZPB5 146 aa12.22□□□□□ -0.45
CHRD-208ENST00000460627 MDFIQ99750 246 aa12.22□□□□□ -0.45
CHRD-208ENST00000460627 MRPL55Q7Z7F7 128 aaKnown RBP12.21□□□□□ -0.45
CHRD-208ENST00000460627 PRYO14603 147 aa12.2□□□□□ -0.46
CHRD-208ENST00000460627 SCXQ7RTU7 201 aa12.2□□□□□ -0.46
CHRD-208ENST00000460627 UNC80Q8N2C7 3258 aa12.2□□□□□ -0.46
CHRD-208ENST00000460627 KRTAP1-1Q07627 177 aa12.2□□□□□ -0.46
CHRD-208ENST00000460627 MAST4O15021 2626 aa12.19□□□□□ -0.46
CHRD-208ENST00000460627 MT-ATP8P03928 68 aa12.19□□□□□ -0.46
CHRD-208ENST00000460627 ENHOQ6UWT2 76 aa12.19□□□□□ -0.46
CHRD-208ENST00000460627 TMEM258P61165 79 aa12.18□□□□□ -0.46
CHRD-208ENST00000460627 CSNK1G2-AS1Q8NCQ2 148 aa12.18□□□□□ -0.46
CHRD-208ENST00000460627 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
CHRD-208ENST00000460627 MGAQ8IWI9 3026 aa12.16□□□□□ -0.46
CHRD-208ENST00000460627 C10orf25Q5T742 122 aa12.16□□□□□ -0.46
CHRD-208ENST00000460627 IMUPQ9GZP8 106 aa12.15□□□□□ -0.46
CHRD-208ENST00000460627 LINC00337Q8N6G1 96 aa12.15□□□□□ -0.47
CHRD-208ENST00000460627 C19orf73Q9NVV2 129 aa12.15□□□□□ -0.47
CHRD-208ENST00000460627 A0A087WYN8 130 aa12.13□□□□□ -0.47
CHRD-208ENST00000460627 IGKV4-1P06312 121 aa12.13□□□□□ -0.47
CHRD-208ENST00000460627 PRUNE2Q8WUY3 3088 aa12.13□□□□□ -0.47
CHRD-208ENST00000460627 SPINK6Q6UWN8 80 aa12.13□□□□□ -0.47
CHRD-208ENST00000460627 FAM240AA0A1B0GVK7 77 aa12.13□□□□□ -0.47
CHRD-208ENST00000460627 CHKB-CPT1BH3BT56 60 aa12.13□□□□□ -0.47
CHRD-208ENST00000460627 C1orf137Q5JT78 98 aa12.13□□□□□ -0.47
CHRD-208ENST00000460627 CDH23Q9H251 3354 aa12.13□□□□□ -0.47
CHRD-208ENST00000460627 KRTAP10-3P60369 221 aa12.12□□□□□ -0.47
CHRD-208ENST00000460627 A0A0C4DFX4 3053 aa12.11□□□□□ -0.47
CHRD-208ENST00000460627 Q6JHZ5 121 aa12.11□□□□□ -0.47
CHRD-208ENST00000460627 LINC00575Q6W349 94 aa12.1□□□□□ -0.47
CHRD-208ENST00000460627 C22orf24Q9Y442 160 aa12.1□□□□□ -0.47
CHRD-208ENST00000460627 C6orf48Q9UBA6 75 aa12.09□□□□□ -0.47
CHRD-208ENST00000460627 LINC00588Q9Y4M8 146 aa12.09□□□□□ -0.47
CHRD-208ENST00000460627 HRCT1Q6UXD1 115 aa12.08□□□□□ -0.48
CHRD-208ENST00000460627 K7EIL1 84 aa12.08□□□□□ -0.48
CHRD-208ENST00000460627 GIG44P09565 113 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms