RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 Q6ZVH6 145 aa13.15□□□□□ -0.3
HIGD1A-204ENST00000452906 COX11Q9Y6N1 276 aa13.15□□□□□ -0.3
HIGD1A-204ENST00000452906 VPS13DQ5THJ4 4388 aa13.14□□□□□ -0.31
HIGD1A-204ENST00000452906 GCSHP23434 173 aa13.14□□□□□ -0.31
HIGD1A-204ENST00000452906 C6orf226Q5I0X4 101 aa13.14□□□□□ -0.31
HIGD1A-204ENST00000452906 ORAOV1Q8WV07 137 aa13.14□□□□□ -0.31
HIGD1A-204ENST00000452906 ZNF625Q96I27 306 aaPredicted RBP13.14□□□□□ -0.31
HIGD1A-204ENST00000452906 HINT1P49773 126 aaPredicted RBP13.13□□□□□ -0.31
HIGD1A-204ENST00000452906 TTC32Q5I0X7 151 aa13.13□□□□□ -0.31
HIGD1A-204ENST00000452906 COPS9Q8WXC6 57 aa13.13□□□□□ -0.31
HIGD1A-204ENST00000452906 SNHG12Q9BXW3 62 aa13.13□□□□□ -0.31
HIGD1A-204ENST00000452906 IGKV2D-24A0A075B6R9 120 aa13.12□□□□□ -0.31
HIGD1A-204ENST00000452906 BATFQ16520 125 aa13.12□□□□□ -0.31
HIGD1A-204ENST00000452906 BVES-AS1Q5T3Y7 98 aa13.12□□□□□ -0.31
HIGD1A-204ENST00000452906 TMEM238LA0A1B0GVL6 79 aa13.11□□□□□ -0.31
HIGD1A-204ENST00000452906 A6NDN8 102 aa13.11□□□□□ -0.31
HIGD1A-204ENST00000452906 A6NJY4 79 aa13.11□□□□□ -0.31
HIGD1A-204ENST00000452906 CKS1BP61024 79 aa13.11□□□□□ -0.31
HIGD1A-204ENST00000452906 CEND1Q8N111 149 aa13.11□□□□□ -0.31
HIGD1A-204ENST00000452906 DNAH10Q8IVF4 4471 aa13.11□□□□□ -0.31
HIGD1A-204ENST00000452906 TM2D2Q9BX73 214 aa13.1□□□□□ -0.31
HIGD1A-204ENST00000452906 F8WDY8 70 aa13.09□□□□□ -0.31
HIGD1A-204ENST00000452906 SPAG11BQ08648 103 aa13.09□□□□□ -0.31
HIGD1A-204ENST00000452906 MEIG1Q5JSS6 88 aa13.09□□□□□ -0.31
HIGD1A-204ENST00000452906 COL5A1-AS1Q5SY13 56 aa13.09□□□□□ -0.31
HIGD1A-204ENST00000452906 SPANXDQ9BXN6 97 aa13.09□□□□□ -0.31
HIGD1A-204ENST00000452906 Q9HAA7 133 aa13.09□□□□□ -0.31
HIGD1A-204ENST00000452906 SPANXCQ9NY87 97 aa13.09□□□□□ -0.31
HIGD1A-204ENST00000452906 EREGO14944 169 aa13.08□□□□□ -0.32
HIGD1A-204ENST00000452906 PTTG1IPP53801 180 aa13.08□□□□□ -0.32
HIGD1A-204ENST00000452906 KRTAP26-1Q6PEX3 210 aa13.08□□□□□ -0.32
HIGD1A-204ENST00000452906 IFITM1P13164 125 aa13.07□□□□□ -0.32
HIGD1A-204ENST00000452906 HECTD4Q9Y4D8 3996 aa13.07□□□□□ -0.32
HIGD1A-204ENST00000452906 LINC00336Q6ZUF6 198 aa13.06□□□□□ -0.32
HIGD1A-204ENST00000452906 RPL24P83731 157 aaKnown RBP13.05□□□□□ -0.32
HIGD1A-204ENST00000452906 KIAA0087Q14695 138 aa13.05□□□□□ -0.32
HIGD1A-204ENST00000452906 ZNF561-AS1K7EIQ3 104 aa13.04□□□□□ -0.32
HIGD1A-204ENST00000452906 LITAFQ99732 161 aa13.04□□□□□ -0.32
HIGD1A-204ENST00000452906 PPDPFQ9H3Y8 114 aa13.04□□□□□ -0.32
HIGD1A-204ENST00000452906 COX17Q14061 63 aa13.03□□□□□ -0.32
HIGD1A-204ENST00000452906 ERG28Q9UKR5 140 aa13.02□□□□□ -0.33
HIGD1A-204ENST00000452906 NBDYA0A0U1RRE5 68 aa13.01□□□□□ -0.33
HIGD1A-204ENST00000452906 C2orf48Q96LS8 159 aa13.01□□□□□ -0.33
HIGD1A-204ENST00000452906 GVQW2A0A096LPI5 108 aaPredicted RBP13□□□□□ -0.33
HIGD1A-204ENST00000452906 TRAV16A0A0A6YYK6 109 aaPredicted RBP13□□□□□ -0.33
HIGD1A-204ENST00000452906 FXYD2P54710 66 aa13□□□□□ -0.33
HIGD1A-204ENST00000452906 NTN5Q8WTR8 489 aaPredicted RBP13□□□□□ -0.33
HIGD1A-204ENST00000452906 SMIM13P0DJ93 91 aa12.99□□□□□ -0.33
HIGD1A-204ENST00000452906 LINC00158P58513 81 aa12.99□□□□□ -0.33
HIGD1A-204ENST00000452906 C15orf56Q8N910 161 aa12.98□□□□□ -0.33
HIGD1A-204ENST00000452906 TRBV30A0A0K0K1B3 111 aa12.97□□□□□ -0.33
HIGD1A-204ENST00000452906 M0R2N4 97 aa12.97□□□□□ -0.33
HIGD1A-204ENST00000452906 ADAMTSL4-AS1Q5T5F5 129 aa12.97□□□□□ -0.33
HIGD1A-204ENST00000452906 C2orf82Q6UX34 121 aa12.97□□□□□ -0.33
HIGD1A-204ENST00000452906 MUSTN1Q8IVN3 82 aa12.97□□□□□ -0.33
HIGD1A-204ENST00000452906 CAMK2N2Q96S95 79 aa12.97□□□□□ -0.33
HIGD1A-204ENST00000452906 NHP2Q9NX24 153 aaKnown RBP12.97□□□□□ -0.33
HIGD1A-204ENST00000452906 PSCAO43653 123 aa12.96□□□□□ -0.33
HIGD1A-204ENST00000452906 A0A1B0GWB2 263 aa12.95□□□□□ -0.34
HIGD1A-204ENST00000452906 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
HIGD1A-204ENST00000452906 KRTAP1-5Q9BYS1 174 aa12.95□□□□□ -0.34
HIGD1A-204ENST00000452906 HERC2O95714 4834 aa12.95□□□□□ -0.34
HIGD1A-204ENST00000452906 PFN2P35080 140 aa12.94□□□□□ -0.34
HIGD1A-204ENST00000452906 HIGD2BQ4VC39 106 aa12.94□□□□□ -0.34
HIGD1A-204ENST00000452906 C14orf177Q52M58 125 aa12.94□□□□□ -0.34
HIGD1A-204ENST00000452906 MIR7-3HGQ8N6C7 128 aa12.94□□□□□ -0.34
HIGD1A-204ENST00000452906 A0A0U1RRA0 63 aa12.93□□□□□ -0.34
HIGD1A-204ENST00000452906 A0A1B0GVY2 172 aa12.93□□□□□ -0.34
HIGD1A-204ENST00000452906 USP17L23D6RBM5 183 aa12.93□□□□□ -0.34
HIGD1A-204ENST00000452906 A4D1N5 150 aa12.92□□□□□ -0.34
HIGD1A-204ENST00000452906 RTL8CO15255 209 aa12.92□□□□□ -0.34
HIGD1A-204ENST00000452906 UNQ6190/PRO20217Q6UXQ8 127 aa12.92□□□□□ -0.34
HIGD1A-204ENST00000452906 Q6ZR54 194 aa12.92□□□□□ -0.34
HIGD1A-204ENST00000452906 A0A0B4J2C4 111 aa12.91□□□□□ -0.34
HIGD1A-204ENST00000452906 C6orf223Q8N319 242 aa12.91□□□□□ -0.34
HIGD1A-204ENST00000452906 DAND5Q8N907 189 aa12.91□□□□□ -0.34
HIGD1A-204ENST00000452906 RAB37Q96AX2 223 aa12.91□□□□□ -0.34
HIGD1A-204ENST00000452906 SYCNQ0VAF6 134 aa12.9□□□□□ -0.34
HIGD1A-204ENST00000452906 RNF151Q2KHN1 245 aa12.9□□□□□ -0.34
HIGD1A-204ENST00000452906 C1orf134Q5TEV5 83 aa12.9□□□□□ -0.34
HIGD1A-204ENST00000452906 FAT2Q9NYQ8 4349 aa12.9□□□□□ -0.34
HIGD1A-204ENST00000452906 KIAA1109Q2LD37 5005 aa12.89□□□□□ -0.35
HIGD1A-204ENST00000452906 DNAH17Q9UFH2 4485 aa12.89□□□□□ -0.35
HIGD1A-204ENST00000452906 PKHD1P08F94 4074 aa12.88□□□□□ -0.35
HIGD1A-204ENST00000452906 TAX1BP3O14907 124 aa12.88□□□□□ -0.35
HIGD1A-204ENST00000452906 NPC2P61916 151 aa12.88□□□□□ -0.35
HIGD1A-204ENST00000452906 LINC00526Q96FQ7 95 aa12.88□□□□□ -0.35
HIGD1A-204ENST00000452906 DNAH2Q9P225 4427 aa12.87□□□□□ -0.35
HIGD1A-204ENST00000452906 LOC107984156A0A0G2JMH3 177 aa12.87□□□□□ -0.35
HIGD1A-204ENST00000452906 C10orf25Q5T742 122 aa12.87□□□□□ -0.35
HIGD1A-204ENST00000452906 ARL17AQ8IVW1 177 aa12.87□□□□□ -0.35
HIGD1A-204ENST00000452906 CARD19Q96LW7 228 aa12.87□□□□□ -0.35
HIGD1A-204ENST00000452906 C6orf48Q9UBA6 75 aa12.87□□□□□ -0.35
HIGD1A-204ENST00000452906 CFC1BP0CG36 223 aa12.86□□□□□ -0.35
HIGD1A-204ENST00000452906 CFC1P0CG37 223 aa12.86□□□□□ -0.35
HIGD1A-204ENST00000452906 Q6ZRU5 148 aa12.86□□□□□ -0.35
HIGD1A-204ENST00000452906 PRO1854Q9UHT4 67 aa12.86□□□□□ -0.35
HIGD1A-204ENST00000452906 K7ERJ3 54 aa12.85□□□□□ -0.35
HIGD1A-204ENST00000452906 SND1-IT1Q9HBX3 110 aa12.85□□□□□ -0.35
HIGD1A-204ENST00000452906 C9orf118A6NHY6 69 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms