RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 NANOS2P60321 138 aaKnown RBP7.43□□□□□ -1.22
LINC00342-202ENST00000448494 SPTSSBQ8NFR3 76 aa7.43□□□□□ -1.22
LINC00342-202ENST00000448494 LIMD2Q9BT23 127 aa7.43□□□□□ -1.22
LINC00342-202ENST00000448494 FLNBO75369 2602 aaKnown RBP7.43□□□□□ -1.22
LINC00342-202ENST00000448494 IGKV4-1P06312 121 aa7.42□□□□□ -1.22
LINC00342-202ENST00000448494 MUC7Q8TAX7 377 aa7.42□□□□□ -1.22
LINC00342-202ENST00000448494 URB1O60287 2271 aaKnown RBP7.42□□□□□ -1.22
LINC00342-202ENST00000448494 HELZ2Q9BYK8 2649 aaKnown RBP7.42□□□□□ -1.22
LINC00342-202ENST00000448494 MGAQ8IWI9 3026 aa7.42□□□□□ -1.22
LINC00342-202ENST00000448494 LINC00575Q6W349 94 aa7.42□□□□□ -1.22
LINC00342-202ENST00000448494 LOC400499M0QZD8 3231 aa7.42□□□□□ -1.22
LINC00342-202ENST00000448494 FREM2Q5SZK8 3169 aa7.42□□□□□ -1.22
LINC00342-202ENST00000448494 IGHV4-38-2P0DP08 117 aa7.41□□□□□ -1.22
LINC00342-202ENST00000448494 ZCCHC13Q8WW36 166 aaKnown RBP7.41□□□□□ -1.22
LINC00342-202ENST00000448494 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
LINC00342-202ENST00000448494 Q6ZSN1 163 aa7.41□□□□□ -1.22
LINC00342-202ENST00000448494 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
LINC00342-202ENST00000448494 CDC42SE2Q9NRR3 84 aa7.41□□□□□ -1.22
LINC00342-202ENST00000448494 SMG1Q96Q15 3661 aaKnown RBP7.41□□□□□ -1.22
LINC00342-202ENST00000448494 SEM1Q6ZVN7 128 aa7.4□□□□□ -1.22
LINC00342-202ENST00000448494 ICE1Q9Y2F5 2266 aa7.4□□□□□ -1.23
LINC00342-202ENST00000448494 G3V318 75 aa7.39□□□□□ -1.23
LINC00342-202ENST00000448494 APC2O95996 2303 aa7.39□□□□□ -1.23
LINC00342-202ENST00000448494 WNK2Q9Y3S1 2297 aa7.39□□□□□ -1.23
LINC00342-202ENST00000448494 MINOS1-NBL1R4GNA1 71 aa7.39□□□□□ -1.23
LINC00342-202ENST00000448494 J3QKU1 62 aa7.39□□□□□ -1.23
LINC00342-202ENST00000448494 RHPN1-AS1Q9BWJ2 59 aa7.39□□□□□ -1.23
LINC00342-202ENST00000448494 IGKV3-7A0A075B6H7 116 aa7.38□□□□□ -1.23
LINC00342-202ENST00000448494 ESM1Q9NQ30 184 aa7.38□□□□□ -1.23
LINC00342-202ENST00000448494 TOMM7Q9P0U1 55 aa7.38□□□□□ -1.23
LINC00342-202ENST00000448494 ACACAQ13085 2346 aa7.38□□□□□ -1.23
LINC00342-202ENST00000448494 MAST4O15021 2626 aa7.38□□□□□ -1.23
LINC00342-202ENST00000448494 DEFB114Q30KQ6 69 aa7.38□□□□□ -1.23
LINC00342-202ENST00000448494 ABCA4P78363 2273 aa7.37□□□□□ -1.23
LINC00342-202ENST00000448494 Q75L30 129 aa7.37□□□□□ -1.23
LINC00342-202ENST00000448494 FDCSPQ8NFU4 85 aa7.37□□□□□ -1.23
LINC00342-202ENST00000448494 LAMA5O15230 3695 aa7.37□□□□□ -1.23
LINC00342-202ENST00000448494 NKAPP1Q8N9T2 125 aa7.37□□□□□ -1.23
LINC00342-202ENST00000448494 PRR26Q8N8Z3 221 aa7.36□□□□□ -1.23
LINC00342-202ENST00000448494 LINC01006Q8NI28 216 aa7.36□□□□□ -1.23
LINC00342-202ENST00000448494 SPINK13Q1W4C9 94 aa7.35□□□□□ -1.23
LINC00342-202ENST00000448494 TENM4Q6N022 2769 aa7.35□□□□□ -1.23
LINC00342-202ENST00000448494 ELOF1P60002 83 aaKnown RBP7.35□□□□□ -1.23
LINC00342-202ENST00000448494 C6orf99Q4VX62 202 aa7.35□□□□□ -1.23
LINC00342-202ENST00000448494 Q8N9P0 234 aaPredicted RBP7.35□□□□□ -1.23
LINC00342-202ENST00000448494 CDC42SE1Q9NRR8 79 aa7.35□□□□□ -1.23
LINC00342-202ENST00000448494 NDUFB1O75438 58 aa7.34□□□□□ -1.23
LINC00342-202ENST00000448494 KHDC1LQ5JSQ8 128 aa7.34□□□□□ -1.23
LINC00342-202ENST00000448494 VPREB1P12018 145 aa7.34□□□□□ -1.23
LINC00342-202ENST00000448494 LMO4P61968 165 aa7.34□□□□□ -1.23
LINC00342-202ENST00000448494 BSPH1Q075Z2 132 aa7.33□□□□□ -1.24
LINC00342-202ENST00000448494 IGLV4-60A0A075B6I1 120 aa7.33□□□□□ -1.24
LINC00342-202ENST00000448494 IGKV3-20P01619 116 aa7.33□□□□□ -1.24
LINC00342-202ENST00000448494 COX7BP24311 80 aa7.33□□□□□ -1.24
LINC00342-202ENST00000448494 Q8N9L7 120 aa7.33□□□□□ -1.24
LINC00342-202ENST00000448494 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
LINC00342-202ENST00000448494 MYO18BQ8IUG5 2567 aa7.32□□□□□ -1.24
LINC00342-202ENST00000448494 NAV2Q8IVL1 2488 aa7.32□□□□□ -1.24
LINC00342-202ENST00000448494 LOC100131303A0A0U1RQF7 123 aa7.32□□□□□ -1.24
LINC00342-202ENST00000448494 FAM30AQ9NZY2 134 aa7.32□□□□□ -1.24
LINC00342-202ENST00000448494 ZNF462Q96JM2 2506 aa7.32□□□□□ -1.24
LINC00342-202ENST00000448494 LOC101927531A0A1B0GV80 90 aa7.31□□□□□ -1.24
LINC00342-202ENST00000448494 A6NED7 52 aa7.31□□□□□ -1.24
LINC00342-202ENST00000448494 USMG5Q96IX5 58 aa7.31□□□□□ -1.24
LINC00342-202ENST00000448494 IGHV3OR16-9A0A0B4J2B5 98 aa7.31□□□□□ -1.24
LINC00342-202ENST00000448494 CELSR3Q9NYQ7 3312 aa7.3□□□□□ -1.24
LINC00342-202ENST00000448494 LINC00612Q8N6U2 182 aa7.3□□□□□ -1.24
LINC00342-202ENST00000448494 KALRNO60229 2985 aa7.3□□□□□ -1.24
LINC00342-202ENST00000448494 Q6ZQY7 126 aa7.3□□□□□ -1.24
LINC00342-202ENST00000448494 SMIM29Q86T20 159 aa7.3□□□□□ -1.24
LINC00342-202ENST00000448494 CFAP46Q8IYW2 2715 aa7.29□□□□□ -1.24
LINC00342-202ENST00000448494 B9D2Q9BPU9 175 aa7.29□□□□□ -1.24
LINC00342-202ENST00000448494 Q9BRP9 147 aa7.29□□□□□ -1.24
LINC00342-202ENST00000448494 FAM215AQ9Y5M1 114 aa7.29□□□□□ -1.24
LINC00342-202ENST00000448494 TRGV2A0A075B6R0 118 aa7.28□□□□□ -1.24
LINC00342-202ENST00000448494 ETDCA0A1B0GVM5 59 aa7.28□□□□□ -1.24
LINC00342-202ENST00000448494 H3BUA1 57 aa7.28□□□□□ -1.24
LINC00342-202ENST00000448494 C19orf84I3L1E1 186 aa7.28□□□□□ -1.24
LINC00342-202ENST00000448494 PRR3P79522 188 aaKnown RBP7.28□□□□□ -1.24
LINC00342-202ENST00000448494 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.28□□□□□ -1.24
LINC00342-202ENST00000448494 C5orf56Q8N8D9 126 aa7.28□□□□□ -1.24
LINC00342-202ENST00000448494 COL6A6A6NMZ7 2263 aa7.28□□□□□ -1.24
LINC00342-202ENST00000448494 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.27□□□□□ -1.24
LINC00342-202ENST00000448494 LYNX1G3V0Z9 82 aa7.27□□□□□ -1.24
LINC00342-202ENST00000448494 LYNX1P0DP58 116 aa7.27□□□□□ -1.24
LINC00342-202ENST00000448494 MOBPQ13875 183 aa7.27□□□□□ -1.24
LINC00342-202ENST00000448494 CELA1Q9UNI1 258 aa7.27□□□□□ -1.24
LINC00342-202ENST00000448494 COX17Q14061 63 aa7.27□□□□□ -1.25
LINC00342-202ENST00000448494 HTN1P15515 57 aa7.26□□□□□ -1.25
LINC00342-202ENST00000448494 IGHV4-30-2A0A087WSY4 118 aa7.26□□□□□ -1.25
LINC00342-202ENST00000448494 A0A1W2PNU3 283 aaPredicted RBP7.26□□□□□ -1.25
LINC00342-202ENST00000448494 LINC01554Q52M75 96 aa7.26□□□□□ -1.25
LINC00342-202ENST00000448494 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
LINC00342-202ENST00000448494 HECTD1Q9ULT8 2610 aa7.26□□□□□ -1.25
LINC00342-202ENST00000448494 LINC00208Q96KT6 92 aa7.25□□□□□ -1.25
LINC00342-202ENST00000448494 MED13LQ71F56 2210 aa7.25□□□□□ -1.25
LINC00342-202ENST00000448494 PRR4Q16378 134 aa7.25□□□□□ -1.25
LINC00342-202ENST00000448494 ATP1A1-AS1Q5TC04 95 aa7.25□□□□□ -1.25
LINC00342-202ENST00000448494 Q8IZM0 81 aa7.25□□□□□ -1.25
LINC00342-202ENST00000448494 SPANXA2-OT1Q8N9U9 137 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms