RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CD164L2Q6UWJ8 174 aa9.84□□□□□ -0.83
TNFRSF1A-204ENST00000440083 CHCHD10Q8WYQ3 142 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-204ENST00000440083 SPANXDQ9BXN6 97 aa9.84□□□□□ -0.83
TNFRSF1A-204ENST00000440083 SPANXCQ9NY87 97 aa9.84□□□□□ -0.83
TNFRSF1A-204ENST00000440083 KLK12Q9UKR0 248 aa9.84□□□□□ -0.83
TNFRSF1A-204ENST00000440083 K7ERJ3 54 aa9.83□□□□□ -0.84
TNFRSF1A-204ENST00000440083 COX7A2LO14548 114 aa9.83□□□□□ -0.84
TNFRSF1A-204ENST00000440083 PRSS2P07478 247 aa9.83□□□□□ -0.84
TNFRSF1A-204ENST00000440083 RPL24P83731 157 aaKnown RBP9.83□□□□□ -0.84
TNFRSF1A-204ENST00000440083 SFTA2Q6UW10 78 aa9.83□□□□□ -0.84
TNFRSF1A-204ENST00000440083 Q6ZVH6 145 aa9.83□□□□□ -0.84
TNFRSF1A-204ENST00000440083 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
TNFRSF1A-204ENST00000440083 FRAS1Q86XX4 4008 aa9.83□□□□□ -0.84
TNFRSF1A-204ENST00000440083 IGLV10-54A0A075B6I4 117 aa9.82□□□□□ -0.84
TNFRSF1A-204ENST00000440083 C9orf118A6NHY6 69 aa9.82□□□□□ -0.84
TNFRSF1A-204ENST00000440083 MALP21145 153 aa9.82□□□□□ -0.84
TNFRSF1A-204ENST00000440083 VAMP3Q15836 100 aa9.82□□□□□ -0.84
TNFRSF1A-204ENST00000440083 MIAQ16674 131 aa9.82□□□□□ -0.84
TNFRSF1A-204ENST00000440083 Q6ZR54 194 aa9.82□□□□□ -0.84
TNFRSF1A-204ENST00000440083 UPK3BQ9BT76 320 aa9.82□□□□□ -0.84
TNFRSF1A-204ENST00000440083 KRTAP1-5Q9BYS1 174 aa9.82□□□□□ -0.84
TNFRSF1A-204ENST00000440083 COPS9Q8WXC6 57 aa9.81□□□□□ -0.84
TNFRSF1A-204ENST00000440083 ZNF625Q96I27 306 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-204ENST00000440083 FAT2Q9NYQ8 4349 aa9.81□□□□□ -0.84
TNFRSF1A-204ENST00000440083 NBDYA0A0U1RRE5 68 aa9.8□□□□□ -0.84
TNFRSF1A-204ENST00000440083 MUSTN1Q8IVN3 82 aa9.8□□□□□ -0.84
TNFRSF1A-204ENST00000440083 UBE2WQ96B02 151 aa9.8□□□□□ -0.84
TNFRSF1A-204ENST00000440083 LITAFQ99732 161 aa9.8□□□□□ -0.84
TNFRSF1A-204ENST00000440083 PRR34Q9NV39 138 aa9.8□□□□□ -0.84
TNFRSF1A-204ENST00000440083 EPPK1P58107 5090 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-204ENST00000440083 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-204ENST00000440083 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
TNFRSF1A-204ENST00000440083 A0A1B0GWB2 263 aa9.79□□□□□ -0.84
TNFRSF1A-204ENST00000440083 GAGE12HA6NDE8 117 aa9.79□□□□□ -0.84
TNFRSF1A-204ENST00000440083 H3BUT2 72 aa9.79□□□□□ -0.84
TNFRSF1A-204ENST00000440083 APOMO95445 188 aa9.79□□□□□ -0.84
TNFRSF1A-204ENST00000440083 IFITM1P13164 125 aa9.79□□□□□ -0.84
TNFRSF1A-204ENST00000440083 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
TNFRSF1A-204ENST00000440083 C6orf226Q5I0X4 101 aa9.78□□□□□ -0.84
TNFRSF1A-204ENST00000440083 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
TNFRSF1A-204ENST00000440083 Q8IZM0 81 aa9.78□□□□□ -0.84
TNFRSF1A-204ENST00000440083 A4D1N5 150 aa9.77□□□□□ -0.85
TNFRSF1A-204ENST00000440083 FOXI1Q12951 378 aa9.77□□□□□ -0.85
TNFRSF1A-204ENST00000440083 ENHOQ6UWT2 76 aa9.77□□□□□ -0.85
TNFRSF1A-204ENST00000440083 NAA38Q9BRA0 125 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-204ENST00000440083 FABP2P12104 132 aa9.76□□□□□ -0.85
TNFRSF1A-204ENST00000440083 CXCL5P42830 114 aa9.76□□□□□ -0.85
TNFRSF1A-204ENST00000440083 CKS1BP61024 79 aa9.76□□□□□ -0.85
TNFRSF1A-204ENST00000440083 NPC2P61916 151 aa9.76□□□□□ -0.85
TNFRSF1A-204ENST00000440083 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
TNFRSF1A-204ENST00000440083 A0A0B4J2C4 111 aa9.75□□□□□ -0.85
TNFRSF1A-204ENST00000440083 A0A0U1RRA0 63 aa9.75□□□□□ -0.85
TNFRSF1A-204ENST00000440083 A0A1W2PPM0 123 aa9.75□□□□□ -0.85
TNFRSF1A-204ENST00000440083 RTL8CO15255 209 aa9.75□□□□□ -0.85
TNFRSF1A-204ENST00000440083 CFC1BP0CG36 223 aa9.74□□□□□ -0.85
TNFRSF1A-204ENST00000440083 CFC1P0CG37 223 aa9.74□□□□□ -0.85
TNFRSF1A-204ENST00000440083 GTF2H5Q6ZYL4 71 aa9.74□□□□□ -0.85
TNFRSF1A-204ENST00000440083 DAND5Q8N907 189 aa9.74□□□□□ -0.85
TNFRSF1A-204ENST00000440083 PGPEP1Q9NXJ5 209 aa9.74□□□□□ -0.85
TNFRSF1A-204ENST00000440083 DNAH11Q96DT5 4516 aa9.73□□□□□ -0.85
TNFRSF1A-204ENST00000440083 IBA57-AS1B1ANH7 110 aa9.73□□□□□ -0.85
TNFRSF1A-204ENST00000440083 DNAH10OSP0CZ25 163 aa9.73□□□□□ -0.85
TNFRSF1A-204ENST00000440083 LINC00158P58513 81 aa9.73□□□□□ -0.85
TNFRSF1A-204ENST00000440083 SPAG11BQ08648 103 aa9.73□□□□□ -0.85
TNFRSF1A-204ENST00000440083 TTC32Q5I0X7 151 aa9.73□□□□□ -0.85
TNFRSF1A-204ENST00000440083 C1orf134Q5TEV5 83 aa9.73□□□□□ -0.85
TNFRSF1A-204ENST00000440083 LINC00308Q8TCZ7 52 aa9.73□□□□□ -0.85
TNFRSF1A-204ENST00000440083 PRO1854Q9UHT4 67 aa9.73□□□□□ -0.85
TNFRSF1A-204ENST00000440083 UBE2V1Q13404 147 aa9.72□□□□□ -0.85
TNFRSF1A-204ENST00000440083 LYRM7Q5U5X0 104 aa9.72□□□□□ -0.85
TNFRSF1A-204ENST00000440083 C1orf43Q9BWL3 253 aa9.72□□□□□ -0.85
TNFRSF1A-204ENST00000440083 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
TNFRSF1A-204ENST00000440083 SPCS1Q9Y6A9 102 aa9.72□□□□□ -0.85
TNFRSF1A-204ENST00000440083 HECTD4Q9Y4D8 3996 aa9.72□□□□□ -0.85
TNFRSF1A-204ENST00000440083 GAGE10A6NGK3 116 aa9.71□□□□□ -0.86
TNFRSF1A-204ENST00000440083 K7EP34 96 aa9.71□□□□□ -0.86
TNFRSF1A-204ENST00000440083 TSPAN13O95857 204 aa9.71□□□□□ -0.86
TNFRSF1A-204ENST00000440083 C6orf223Q8N319 242 aa9.71□□□□□ -0.86
TNFRSF1A-204ENST00000440083 PKD1P98161 4303 aa9.71□□□□□ -0.86
TNFRSF1A-204ENST00000440083 Q1RN00 199 aa9.7□□□□□ -0.86
TNFRSF1A-204ENST00000440083 MIR7-3HGQ8N6C7 128 aa9.7□□□□□ -0.86
TNFRSF1A-204ENST00000440083 PPDPFQ9H3Y8 114 aa9.7□□□□□ -0.86
TNFRSF1A-204ENST00000440083 IGKV2D-24A0A075B6R9 120 aa9.69□□□□□ -0.86
TNFRSF1A-204ENST00000440083 PFN2P35080 140 aa9.69□□□□□ -0.86
TNFRSF1A-204ENST00000440083 KIAA0087Q14695 138 aa9.68□□□□□ -0.86
TNFRSF1A-204ENST00000440083 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
TNFRSF1A-204ENST00000440083 H7C2G1 150 aa9.67□□□□□ -0.86
TNFRSF1A-204ENST00000440083 PSMB2P49721 201 aa9.67□□□□□ -0.86
TNFRSF1A-204ENST00000440083 RMI2Q96E14 147 aa9.67□□□□□ -0.86
TNFRSF1A-204ENST00000440083 Q9HAA7 133 aa9.67□□□□□ -0.86
TNFRSF1A-204ENST00000440083 LOC107984156A0A0G2JMH3 177 aa9.66□□□□□ -0.86
TNFRSF1A-204ENST00000440083 TNP2Q05952 138 aa9.66□□□□□ -0.86
TNFRSF1A-204ENST00000440083 SOSTDC1Q6X4U4 206 aa9.66□□□□□ -0.86
TNFRSF1A-204ENST00000440083 ARL17AQ8IVW1 177 aa9.66□□□□□ -0.86
TNFRSF1A-204ENST00000440083 DYNC1H1Q14204 4646 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-204ENST00000440083 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
TNFRSF1A-204ENST00000440083 EIF4EBP3O60516 100 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-204ENST00000440083 RPL13AP40429 203 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-204ENST00000440083 COX17Q14061 63 aa9.65□□□□□ -0.86
TNFRSF1A-204ENST00000440083 Q6ZRN7 208 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms