RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 UNQ6190/PRO20217Q6UXQ8 127 aa11.36□□□□□ -0.59
PTPN13-204ENST00000436978 WFDC13Q8IUB5 93 aa11.36□□□□□ -0.59
PTPN13-204ENST00000436978 Q8N9L7 120 aa11.35□□□□□ -0.59
PTPN13-204ENST00000436978 COX6A2Q02221 97 aa11.35□□□□□ -0.59
PTPN13-204ENST00000436978 SVIPQ8NHG7 77 aa11.35□□□□□ -0.59
PTPN13-204ENST00000436978 ANKRD17O75179 2603 aaKnown RBP11.35□□□□□ -0.59
PTPN13-204ENST00000436978 AMELXQ99217 191 aa11.35□□□□□ -0.59
PTPN13-204ENST00000436978 ZFYVE26Q68DK2 2539 aa11.34□□□□□ -0.59
PTPN13-204ENST00000436978 C1orf134Q5TEV5 83 aa11.34□□□□□ -0.59
PTPN13-204ENST00000436978 C6orf223Q8N319 242 aa11.34□□□□□ -0.59
PTPN13-204ENST00000436978 FAM240AA0A1B0GVK7 77 aa11.33□□□□□ -0.59
PTPN13-204ENST00000436978 CIRBP-AS1Q8TBR5 109 aa11.33□□□□□ -0.59
PTPN13-204ENST00000436978 TRBV10-3A0A0K0K1G6 114 aa11.33□□□□□ -0.6
PTPN13-204ENST00000436978 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
PTPN13-204ENST00000436978 C1orf137Q5JT78 98 aa11.32□□□□□ -0.6
PTPN13-204ENST00000436978 Q8N2B8 174 aa11.31□□□□□ -0.6
PTPN13-204ENST00000436978 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
PTPN13-204ENST00000436978 IGLV4-60A0A075B6I1 120 aa11.3□□□□□ -0.6
PTPN13-204ENST00000436978 A0A1W2PPR1 153 aa11.3□□□□□ -0.6
PTPN13-204ENST00000436978 FSHBP01225 129 aa11.3□□□□□ -0.6
PTPN13-204ENST00000436978 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
PTPN13-204ENST00000436978 FAM30AQ9NZY2 134 aa11.29□□□□□ -0.6
PTPN13-204ENST00000436978 LINC00694P0DN24 101 aa11.29□□□□□ -0.6
PTPN13-204ENST00000436978 ESRGQ1W209 222 aa11.29□□□□□ -0.6
PTPN13-204ENST00000436978 NCOR2Q9Y618 2525 aa11.28□□□□□ -0.6
PTPN13-204ENST00000436978 SNURFQ9Y675 71 aa11.28□□□□□ -0.6
PTPN13-204ENST00000436978 LINC01556Q5JQF7 62 aa11.27□□□□□ -0.61
PTPN13-204ENST00000436978 Q6ZVQ6 151 aa11.27□□□□□ -0.61
PTPN13-204ENST00000436978 C2CD3Q4AC94 2353 aa11.27□□□□□ -0.61
PTPN13-204ENST00000436978 COX7CP15954 63 aa11.26□□□□□ -0.61
PTPN13-204ENST00000436978 FHL3Q13643 280 aa11.26□□□□□ -0.61
PTPN13-204ENST00000436978 Q9BRP9 147 aa11.26□□□□□ -0.61
PTPN13-204ENST00000436978 ANKRD11Q6UB99 2663 aaPredicted RBP11.26□□□□□ -0.61
PTPN13-204ENST00000436978 LIMD2Q9BT23 127 aa11.25□□□□□ -0.61
PTPN13-204ENST00000436978 TRAV7A0A075B6U4 112 aa11.23□□□□□ -0.61
PTPN13-204ENST00000436978 A0A087WYN8 130 aa11.23□□□□□ -0.61
PTPN13-204ENST00000436978 Q6Q795 121 aa11.23□□□□□ -0.61
PTPN13-204ENST00000436978 A6NED7 52 aa11.22□□□□□ -0.61
PTPN13-204ENST00000436978 FN1P02751 2386 aaKnown RBP11.22□□□□□ -0.61
PTPN13-204ENST00000436978 Q6ZSN1 163 aa11.21□□□□□ -0.61
PTPN13-204ENST00000436978 TSPEAR-AS2P59090 65 aa11.2□□□□□ -0.62
PTPN13-204ENST00000436978 ABCA12Q86UK0 2595 aa11.2□□□□□ -0.62
PTPN13-204ENST00000436978 IGHV6-1A0A0B4J1U7 121 aa11.2□□□□□ -0.62
PTPN13-204ENST00000436978 URB1-AS1Q96HZ7 61 aa11.2□□□□□ -0.62
PTPN13-204ENST00000436978 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
PTPN13-204ENST00000436978 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
PTPN13-204ENST00000436978 LINC01546A6NGU7 62 aa11.18□□□□□ -0.62
PTPN13-204ENST00000436978 TLN2Q9Y4G6 2542 aa11.17□□□□□ -0.62
PTPN13-204ENST00000436978 LINC00310P59036 64 aa11.16□□□□□ -0.62
PTPN13-204ENST00000436978 C11orf72Q8NBR9 251 aa11.16□□□□□ -0.62
PTPN13-204ENST00000436978 H3BNG1 76 aa11.15□□□□□ -0.62
PTPN13-204ENST00000436978 LINC00575Q6W349 94 aa11.15□□□□□ -0.62
PTPN13-204ENST00000436978 FAM19A4Q96LR4 140 aa11.13□□□□□ -0.63
PTPN13-204ENST00000436978 Q6ZRU5 148 aa11.13□□□□□ -0.63
PTPN13-204ENST00000436978 XGP55808 180 aa11.12□□□□□ -0.63
PTPN13-204ENST00000436978 LINC01547P58512 204 aaPredicted RBP11.12□□□□□ -0.63
PTPN13-204ENST00000436978 CELA1Q9UNI1 258 aa11.12□□□□□ -0.63
PTPN13-204ENST00000436978 MDFIQ99750 246 aa11.11□□□□□ -0.63
PTPN13-204ENST00000436978 LINC00208Q96KT6 92 aa11.1□□□□□ -0.63
PTPN13-204ENST00000436978 TRBV7-6A0A0J9YX20 115 aa11.1□□□□□ -0.63
PTPN13-204ENST00000436978 SPTBN4Q9H254 2564 aa11.09□□□□□ -0.63
PTPN13-204ENST00000436978 CXCL6P80162 114 aa11.09□□□□□ -0.63
PTPN13-204ENST00000436978 HCG22E2RYF7 251 aa11.09□□□□□ -0.63
PTPN13-204ENST00000436978 CCDC179H3BU77 68 aa11.08□□□□□ -0.63
PTPN13-204ENST00000436978 PRR4Q16378 134 aa11.08□□□□□ -0.64
PTPN13-204ENST00000436978 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
PTPN13-204ENST00000436978 SRCAPQ6ZRS2 3230 aa11.08□□□□□ -0.64
PTPN13-204ENST00000436978 A0A096LNJ9 63 aa11.08□□□□□ -0.64
PTPN13-204ENST00000436978 H0Y9P7 68 aa11.08□□□□□ -0.64
PTPN13-204ENST00000436978 KIF25-AS1Q9Y6Z4 181 aa11.07□□□□□ -0.64
PTPN13-204ENST00000436978 A0A087WSZ3 146 aa11.07□□□□□ -0.64
PTPN13-204ENST00000436978 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
PTPN13-204ENST00000436978 PRLHP81277 87 aa11.06□□□□□ -0.64
PTPN13-204ENST00000436978 SMIM26A0A096LP01 95 aa11.05□□□□□ -0.64
PTPN13-204ENST00000436978 Q8N3U1 123 aa11.05□□□□□ -0.64
PTPN13-204ENST00000436978 A0A0U1RQV1 116 aa11.03□□□□□ -0.64
PTPN13-204ENST00000436978 LINC00337Q8N6G1 96 aa11.03□□□□□ -0.64
PTPN13-204ENST00000436978 JMJD1CQ15652 2540 aa11.02□□□□□ -0.64
PTPN13-204ENST00000436978 SMCR5Q8TEV8 140 aa11.02□□□□□ -0.64
PTPN13-204ENST00000436978 A0A1B0GW54 56 aa11.02□□□□□ -0.65
PTPN13-204ENST00000436978 SBSPONQ8IVN8 264 aa11.02□□□□□ -0.65
PTPN13-204ENST00000436978 USP9XQ93008 2570 aaPredicted RBP11.01□□□□□ -0.65
PTPN13-204ENST00000436978 DOPEY1Q5JWR5 2465 aa11.01□□□□□ -0.65
PTPN13-204ENST00000436978 hDV103S1A0JD37 113 aa11□□□□□ -0.65
PTPN13-204ENST00000436978 IGHV3OR16-9A0A0B4J2B5 98 aa11□□□□□ -0.65
PTPN13-204ENST00000436978 RETNLBQ9BQ08 111 aa11□□□□□ -0.65
PTPN13-204ENST00000436978 TP53AIP1Q9HCN2 124 aa10.99□□□□□ -0.65
PTPN13-204ENST00000436978 TRBV7-7A0A0K0K1E9 115 aa10.98□□□□□ -0.65
PTPN13-204ENST00000436978 X6R8D5 127 aa10.98□□□□□ -0.65
PTPN13-204ENST00000436978 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
PTPN13-204ENST00000436978 A8MTW9 85 aa10.98□□□□□ -0.65
PTPN13-204ENST00000436978 C6orf48Q9UBA6 75 aa10.96□□□□□ -0.65
PTPN13-204ENST00000436978 KIAA0087Q14695 138 aa10.95□□□□□ -0.66
PTPN13-204ENST00000436978 FAM229AH3BQW9 127 aa10.95□□□□□ -0.66
PTPN13-204ENST00000436978 A0A087WVE0 104 aa10.94□□□□□ -0.66
PTPN13-204ENST00000436978 DEFB116Q30KQ4 102 aa10.94□□□□□ -0.66
PTPN13-204ENST00000436978 LINC00167Q96N53 147 aa10.94□□□□□ -0.66
PTPN13-204ENST00000436978 C16orf90A8MZG2 172 aa10.93□□□□□ -0.66
PTPN13-204ENST00000436978 MOBPQ13875 183 aa10.93□□□□□ -0.66
PTPN13-204ENST00000436978 PCOTHQ58A44 107 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms