RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CCL24O00175 119 aa10.38□□□□□ -0.75
SYNGAP1-203ENST00000428982 PRB2P02812 416 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-203ENST00000428982 NREPQ16612 68 aa10.38□□□□□ -0.75
SYNGAP1-203ENST00000428982 TMEM254Q8TBM7 123 aa10.38□□□□□ -0.75
SYNGAP1-203ENST00000428982 SLURP1P55000 103 aa10.37□□□□□ -0.75
SYNGAP1-203ENST00000428982 SCXQ7RTU7 201 aa10.37□□□□□ -0.75
SYNGAP1-203ENST00000428982 Q8N3U1 123 aa10.37□□□□□ -0.75
SYNGAP1-203ENST00000428982 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 ZNF575Q86XF7 245 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 PRR15Q8IV56 129 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 COX7B2Q8TF08 81 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 ZNF702PQ9H963 129 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 SMG1Q96Q15 3661 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 NBEAQ8NFP9 2946 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 C4orf3Q8WVX3 66 aa10.35□□□□□ -0.75
SYNGAP1-203ENST00000428982 PRYO14603 147 aa10.35□□□□□ -0.75
SYNGAP1-203ENST00000428982 LINC00315P59091 139 aa10.34□□□□□ -0.75
SYNGAP1-203ENST00000428982 UBE2BP63146 152 aa10.34□□□□□ -0.75
SYNGAP1-203ENST00000428982 C16orf95Q9H693 158 aa10.34□□□□□ -0.75
SYNGAP1-203ENST00000428982 ACANP16112 2415 aa10.34□□□□□ -0.75
SYNGAP1-203ENST00000428982 WNK1Q9H4A3 2382 aa10.33□□□□□ -0.76
SYNGAP1-203ENST00000428982 TRGV1A0A0A0MS02 117 aa10.33□□□□□ -0.76
SYNGAP1-203ENST00000428982 CENPEQ02224 2701 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 TRAV10A0A0B4J240 114 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 C10orf99Q6UWK7 81 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 SMR3AQ99954 134 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 HECTD1Q9ULT8 2610 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 MTORP42345 2549 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 RELNP78509 3460 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 BPY2O14599 106 aa10.31□□□□□ -0.76
SYNGAP1-203ENST00000428982 BEAN1Q3B7T3 259 aa10.3□□□□□ -0.76
SYNGAP1-203ENST00000428982 LINC01547P58512 204 aaPredicted RBP10.3□□□□□ -0.76
SYNGAP1-203ENST00000428982 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
SYNGAP1-203ENST00000428982 TRGV2A0A075B6R0 118 aa10.3□□□□□ -0.76
SYNGAP1-203ENST00000428982 FAM19A3Q7Z5A8 133 aa10.29□□□□□ -0.76
SYNGAP1-203ENST00000428982 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-203ENST00000428982 LINC00337Q8N6G1 96 aa10.29□□□□□ -0.76
SYNGAP1-203ENST00000428982 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 JMJD1CQ15652 2540 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 PDE6GP18545 87 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 LINC01006Q8NI28 216 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 TM2D3Q9BRN9 247 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 HELZ2Q9BYK8 2649 aaKnown RBP10.27□□□□□ -0.77
SYNGAP1-203ENST00000428982 CFAP46Q8IYW2 2715 aa10.27□□□□□ -0.77
SYNGAP1-203ENST00000428982 A0A096LNT2 108 aa10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 SETD2Q9BYW2 2564 aaPredicted RBP10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 TRGV4A0A0C4DH28 118 aa10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 FLNBO75369 2602 aaKnown RBP10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 Q6ZTI0 123 aa10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 KALRNO60229 2985 aa10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 UBE2AP49459 152 aa10.25□□□□□ -0.77
SYNGAP1-203ENST00000428982 Q6ZVQ6 151 aa10.25□□□□□ -0.77
SYNGAP1-203ENST00000428982 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 K7EQD1 137 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 NDUFS5O43920 106 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 FSHBP01225 129 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 Q6ZRU5 148 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 C2CD3Q4AC94 2353 aa10.23□□□□□ -0.77
SYNGAP1-203ENST00000428982 SMIM1B2RUZ4 78 aa10.23□□□□□ -0.77
SYNGAP1-203ENST00000428982 COX6A2Q02221 97 aa10.23□□□□□ -0.77
SYNGAP1-203ENST00000428982 ITPR1Q14643 2758 aa10.23□□□□□ -0.77
SYNGAP1-203ENST00000428982 CCL18P55774 89 aa10.22□□□□□ -0.77
SYNGAP1-203ENST00000428982 C9orf66Q5T8R8 295 aa10.22□□□□□ -0.77
SYNGAP1-203ENST00000428982 MAP6D1Q9H9H5 199 aa10.22□□□□□ -0.77
SYNGAP1-203ENST00000428982 CHD6Q8TD26 2715 aa10.22□□□□□ -0.77
SYNGAP1-203ENST00000428982 PROK1P58294 105 aa10.21□□□□□ -0.77
SYNGAP1-203ENST00000428982 LINC00242Q5T6M2 205 aa10.21□□□□□ -0.77
SYNGAP1-203ENST00000428982 NTM-AS1Q6ZSK4 140 aa10.21□□□□□ -0.77
SYNGAP1-203ENST00000428982 KTN1-AS1Q86SY8 53 aa10.21□□□□□ -0.77
SYNGAP1-203ENST00000428982 APOC4P55056 127 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 PRR4Q16378 134 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 FAM229BQ4G0N7 80 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 Q8N814 137 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 RBM12B-AS1Q9P1G2 102 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 CXCL6P80162 114 aa10.2□□□□□ -0.78
SYNGAP1-203ENST00000428982 C11orf72Q8NBR9 251 aa10.2□□□□□ -0.78
SYNGAP1-203ENST00000428982 FLNCQ14315 2725 aa10.19□□□□□ -0.78
SYNGAP1-203ENST00000428982 A6NED7 52 aa10.19□□□□□ -0.78
SYNGAP1-203ENST00000428982 FN1P02751 2386 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 C18orf65Q6ZTR6 163 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 CHCHD7Q9BUK0 85 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 C1orf158Q8N1D5 194 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 C22orf24Q9Y442 160 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 IGLV5-39A0A0G2JS06 123 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 ESM1Q9NQ30 184 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 C16orf74Q96GX8 76 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 OBSCN-AS1Q96MR7 158 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 IBA57-AS1B1ANH7 110 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 NANOS2P60321 138 aaKnown RBP10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 DEFB114Q30KQ6 69 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 KRTAP1-3Q8IUG1 177 aa10.16□□□□□ -0.78
SYNGAP1-203ENST00000428982 HIGD2AQ9BW72 106 aa10.16□□□□□ -0.78
SYNGAP1-203ENST00000428982 Q9UF83 564 aa10.15□□□□□ -0.78
SYNGAP1-203ENST00000428982 FLNAP21333 2647 aaKnown RBP10.15□□□□□ -0.78
SYNGAP1-203ENST00000428982 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-203ENST00000428982 ADGRG4Q8IZF6 3080 aa10.14□□□□□ -0.79
SYNGAP1-203ENST00000428982 MUC4Q99102 2169 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms