RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 LINC01556Q5JQF7 62 aa6.96□□□□□ -1.3
SNX13-203ENST00000428135 SEC61GP60059 68 aa6.96□□□□□ -1.3
SNX13-203ENST00000428135 PRR4Q16378 134 aa6.95□□□□□ -1.3
SNX13-203ENST00000428135 LINC00242Q5T6M2 205 aa6.95□□□□□ -1.3
SNX13-203ENST00000428135 HELZ2Q9BYK8 2649 aaKnown RBP6.95□□□□□ -1.3
SNX13-203ENST00000428135 ZNF73O43830 326 aaPredicted RBP6.94□□□□□ -1.3
SNX13-203ENST00000428135 C1orf134Q5TEV5 83 aa6.94□□□□□ -1.3
SNX13-203ENST00000428135 CENPEQ02224 2701 aa6.94□□□□□ -1.3
SNX13-203ENST00000428135 C20orf197Q8N268 126 aa6.94□□□□□ -1.3
SNX13-203ENST00000428135 C1orf137Q5JT78 98 aa6.94□□□□□ -1.3
SNX13-203ENST00000428135 PCSK5Q92824 1860 aa6.93□□□□□ -1.3
SNX13-203ENST00000428135 PDE6GP18545 87 aa6.93□□□□□ -1.3
SNX13-203ENST00000428135 CHCHD7Q9BUK0 85 aa6.93□□□□□ -1.3
SNX13-203ENST00000428135 MT-ATP8P03928 68 aa6.93□□□□□ -1.3
SNX13-203ENST00000428135 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
SNX13-203ENST00000428135 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
SNX13-203ENST00000428135 TRBV10-3A0A0K0K1G6 114 aa6.92□□□□□ -1.3
SNX13-203ENST00000428135 LYPD5Q6UWN5 251 aa6.92□□□□□ -1.3
SNX13-203ENST00000428135 Q8IZM0 81 aa6.92□□□□□ -1.3
SNX13-203ENST00000428135 TRIOO75962 3097 aa6.92□□□□□ -1.3
SNX13-203ENST00000428135 FHL3Q13643 280 aa6.92□□□□□ -1.3
SNX13-203ENST00000428135 ZNF706Q9Y5V0 76 aaPredicted RBP6.92□□□□□ -1.3
SNX13-203ENST00000428135 MGAQ8IWI9 3026 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 IGIPA6NJ69 53 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 A8MTW9 85 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 SMIM20Q8N5G0 67 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 CFAP46Q8IYW2 2715 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 DHRS4-AS1Q9P1J3 65 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 LINC00643Q86TS7 51 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 USP24Q9UPU5 2620 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 C3orf22Q8N5N4 141 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 LINC00474Q9P2X8 69 aa6.91□□□□□ -1.3
SNX13-203ENST00000428135 VCANP13611 3396 aa6.9□□□□□ -1.3
SNX13-203ENST00000428135 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
SNX13-203ENST00000428135 MGAM2Q2M2H8 2515 aa6.9□□□□□ -1.3
SNX13-203ENST00000428135 DEFB116Q30KQ4 102 aa6.9□□□□□ -1.3
SNX13-203ENST00000428135 YPEL4Q96NS1 127 aa6.9□□□□□ -1.3
SNX13-203ENST00000428135 SNURFQ9Y675 71 aa6.9□□□□□ -1.3
SNX13-203ENST00000428135 SMIM1B2RUZ4 78 aa6.9□□□□□ -1.3
SNX13-203ENST00000428135 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.31
SNX13-203ENST00000428135 COL6A3P12111 3177 aa6.9□□□□□ -1.31
SNX13-203ENST00000428135 REG3GQ6UW15 175 aa6.89□□□□□ -1.31
SNX13-203ENST00000428135 C2orf91Q6ZV80 131 aa6.89□□□□□ -1.31
SNX13-203ENST00000428135 TSPEAR-AS2P59090 65 aa6.89□□□□□ -1.31
SNX13-203ENST00000428135 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
SNX13-203ENST00000428135 SBSPONQ8IVN8 264 aa6.88□□□□□ -1.31
SNX13-203ENST00000428135 MDFIQ99750 246 aa6.88□□□□□ -1.31
SNX13-203ENST00000428135 RPL28P46779 137 aaKnown RBP6.88□□□□□ -1.31
SNX13-203ENST00000428135 NDUFV3P56181 108 aaKnown RBP6.88□□□□□ -1.31
SNX13-203ENST00000428135 URB1-AS1Q96HZ7 61 aa6.88□□□□□ -1.31
SNX13-203ENST00000428135 PRLHP81277 87 aa6.87□□□□□ -1.31
SNX13-203ENST00000428135 COX17Q14061 63 aa6.87□□□□□ -1.31
SNX13-203ENST00000428135 SPTSSBQ8NFR3 76 aa6.87□□□□□ -1.31
SNX13-203ENST00000428135 TRANK1O15050 2925 aa6.87□□□□□ -1.31
SNX13-203ENST00000428135 CFAP54Q96N23 3096 aa6.86□□□□□ -1.31
SNX13-203ENST00000428135 Q6ZRU5 148 aa6.86□□□□□ -1.31
SNX13-203ENST00000428135 BPTFQ12830 3046 aa6.86□□□□□ -1.31
SNX13-203ENST00000428135 ADAMTSL4-AS1Q5T5F5 129 aa6.86□□□□□ -1.31
SNX13-203ENST00000428135 CNFNQ9BYD5 112 aa6.86□□□□□ -1.31
SNX13-203ENST00000428135 A0A087WYN8 130 aa6.86□□□□□ -1.31
SNX13-203ENST00000428135 EGFEM1PQ0D2K5 195 aa6.86□□□□□ -1.31
SNX13-203ENST00000428135 X6R8D5 127 aa6.86□□□□□ -1.31
SNX13-203ENST00000428135 TIMM17BO60830 172 aa6.86□□□□□ -1.31
SNX13-203ENST00000428135 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
SNX13-203ENST00000428135 Q8N3U1 123 aa6.85□□□□□ -1.31
SNX13-203ENST00000428135 COL27A1Q8IZC6 1860 aaPredicted RBP6.85□□□□□ -1.31
SNX13-203ENST00000428135 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
SNX13-203ENST00000428135 TEP1Q99973 2627 aaKnown RBP6.84□□□□□ -1.31
SNX13-203ENST00000428135 LST1O00453 97 aa6.84□□□□□ -1.31
SNX13-203ENST00000428135 ESRGQ1W209 222 aa6.84□□□□□ -1.31
SNX13-203ENST00000428135 LINC00310P59036 64 aa6.84□□□□□ -1.32
SNX13-203ENST00000428135 MAST4O15021 2626 aa6.83□□□□□ -1.32
SNX13-203ENST00000428135 ATRQ13535 2644 aa6.83□□□□□ -1.32
SNX13-203ENST00000428135 MRPL55Q7Z7F7 128 aaKnown RBP6.83□□□□□ -1.32
SNX13-203ENST00000428135 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
SNX13-203ENST00000428135 Q9BRP9 147 aa6.83□□□□□ -1.32
SNX13-203ENST00000428135 NDUFC2-KCTD14E9PQ53 114 aa6.83□□□□□ -1.32
SNX13-203ENST00000428135 FSHBP01225 129 aa6.82□□□□□ -1.32
SNX13-203ENST00000428135 XGP55808 180 aa6.82□□□□□ -1.32
SNX13-203ENST00000428135 Q9UF83 564 aa6.82□□□□□ -1.32
SNX13-203ENST00000428135 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
SNX13-203ENST00000428135 DSPP15924 2871 aaKnown RBP6.81□□□□□ -1.32
SNX13-203ENST00000428135 NHLRC4P0CG21 123 aaPredicted RBP6.81□□□□□ -1.32
SNX13-203ENST00000428135 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.81□□□□□ -1.32
SNX13-203ENST00000428135 Q8N814 137 aa6.81□□□□□ -1.32
SNX13-203ENST00000428135 ITPR3Q14573 2671 aa6.81□□□□□ -1.32
SNX13-203ENST00000428135 Q6ZVQ6 151 aa6.8□□□□□ -1.32
SNX13-203ENST00000428135 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
SNX13-203ENST00000428135 CELSR3Q9NYQ7 3312 aa6.79□□□□□ -1.32
SNX13-203ENST00000428135 FLNAP21333 2647 aaKnown RBP6.79□□□□□ -1.32
SNX13-203ENST00000428135 Q8N2B8 174 aa6.79□□□□□ -1.32
SNX13-203ENST00000428135 SETXQ7Z333 2677 aaKnown RBP6.79□□□□□ -1.32
SNX13-203ENST00000428135 C11orf72Q8NBR9 251 aa6.79□□□□□ -1.32
SNX13-203ENST00000428135 J3KT08 172 aa6.79□□□□□ -1.32
SNX13-203ENST00000428135 A0A087WSZ3 146 aa6.79□□□□□ -1.32
SNX13-203ENST00000428135 CHTF8P0CG12 524 aa6.79□□□□□ -1.32
SNX13-203ENST00000428135 C2orf48Q96LS8 159 aa6.78□□□□□ -1.32
SNX13-203ENST00000428135 AMELXQ99217 191 aa6.78□□□□□ -1.32
SNX13-203ENST00000428135 VPS13AQ96RL7 3174 aa6.78□□□□□ -1.32
SNX13-203ENST00000428135 SPINK1P00995 79 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms