RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
TCOF1-204ENST00000427724 TRBV27A0A0K0K1C4 114 aa7.68□□□□□ -1.18
TCOF1-204ENST00000427724 UBE2AP49459 152 aa7.68□□□□□ -1.18
TCOF1-204ENST00000427724 PPDPFQ9H3Y8 114 aa7.68□□□□□ -1.18
TCOF1-204ENST00000427724 HAMPP81172 84 aa7.68□□□□□ -1.18
TCOF1-204ENST00000427724 TSPEAR-AS2P59090 65 aa7.67□□□□□ -1.18
TCOF1-204ENST00000427724 IGHV1-58A0A0C4DH39 117 aa7.67□□□□□ -1.18
TCOF1-204ENST00000427724 OVOL2Q9BRP0 275 aa7.67□□□□□ -1.18
TCOF1-204ENST00000427724 LRBAP50851 2863 aa7.67□□□□□ -1.18
TCOF1-204ENST00000427724 TRBV30A0A0K0K1B3 111 aa7.67□□□□□ -1.18
TCOF1-204ENST00000427724 C1orf134Q5TEV5 83 aa7.67□□□□□ -1.18
TCOF1-204ENST00000427724 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 C4orf48Q5BLP8 95 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 A0A087WZ39 114 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 H7C423 109 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 RBMY1FQ15415 496 aaKnown RBP7.66□□□□□ -1.18
TCOF1-204ENST00000427724 MIAQ16674 131 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 IGIPA6NJ69 53 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 C1orf158Q8N1D5 194 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 LINC00467Q9BRT7 94 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 C14orf132Q9NPU4 83 aa7.66□□□□□ -1.18
TCOF1-204ENST00000427724 UBL5Q9BZL1 73 aa7.65□□□□□ -1.18
TCOF1-204ENST00000427724 KRTAP1-1Q07627 177 aa7.65□□□□□ -1.18
TCOF1-204ENST00000427724 CDKN2A-AS1Q9UH64 79 aa7.65□□□□□ -1.18
TCOF1-204ENST00000427724 TRAV13-2A0A0B4J235 113 aa7.65□□□□□ -1.19
TCOF1-204ENST00000427724 TSHBP01222 138 aa7.65□□□□□ -1.19
TCOF1-204ENST00000427724 Q6Q795 121 aa7.65□□□□□ -1.19
TCOF1-204ENST00000427724 WFDC9Q8NEX5 89 aa7.65□□□□□ -1.19
TCOF1-204ENST00000427724 CHCHD10Q8WYQ3 142 aaPredicted RBP7.65□□□□□ -1.19
TCOF1-204ENST00000427724 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
TCOF1-204ENST00000427724 TRBV6-5A0A0K0K1A5 114 aa7.64□□□□□ -1.19
TCOF1-204ENST00000427724 B9D2Q9BPU9 175 aa7.64□□□□□ -1.19
TCOF1-204ENST00000427724 RBM3P98179 157 aaKnown RBP7.64□□□□□ -1.19
TCOF1-204ENST00000427724 IGLV4-69A0A075B6H9 119 aa7.64□□□□□ -1.19
TCOF1-204ENST00000427724 C7orf33Q8WU49 177 aa7.64□□□□□ -1.19
TCOF1-204ENST00000427724 LINC00526Q96FQ7 95 aa7.64□□□□□ -1.19
TCOF1-204ENST00000427724 COL27A1Q8IZC6 1860 aaPredicted RBP7.63□□□□□ -1.19
TCOF1-204ENST00000427724 DEFB105AQ8NG35 78 aa7.63□□□□□ -1.19
TCOF1-204ENST00000427724 LELP1Q5T871 98 aa7.63□□□□□ -1.19
TCOF1-204ENST00000427724 C9orf85Q96MD7 179 aa7.63□□□□□ -1.19
TCOF1-204ENST00000427724 TENM4Q6N022 2769 aa7.63□□□□□ -1.19
TCOF1-204ENST00000427724 K7EIL1 84 aa7.62□□□□□ -1.19
TCOF1-204ENST00000427724 LST1O00453 97 aa7.62□□□□□ -1.19
TCOF1-204ENST00000427724 SND1-IT1Q9HBX3 110 aa7.62□□□□□ -1.19
TCOF1-204ENST00000427724 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
TCOF1-204ENST00000427724 TRAV23DV6A0A075B6W5 121 aa7.61□□□□□ -1.19
TCOF1-204ENST00000427724 SPANXCQ9NY87 97 aa7.61□□□□□ -1.19
TCOF1-204ENST00000427724 HIVEP1P15822 2718 aa7.61□□□□□ -1.19
TCOF1-204ENST00000427724 C20orf197Q8N268 126 aa7.61□□□□□ -1.19
TCOF1-204ENST00000427724 STAB2Q8WWQ8 2551 aa7.6□□□□□ -1.19
TCOF1-204ENST00000427724 COX7CP15954 63 aa7.6□□□□□ -1.19
TCOF1-204ENST00000427724 FAM19A5Q7Z5A7 132 aaPredicted RBP7.6□□□□□ -1.19
TCOF1-204ENST00000427724 COX7B2Q8TF08 81 aa7.6□□□□□ -1.19
TCOF1-204ENST00000427724 HIGD2AQ9BW72 106 aa7.6□□□□□ -1.19
TCOF1-204ENST00000427724 SVEP1Q4LDE5 3571 aa7.6□□□□□ -1.19
TCOF1-204ENST00000427724 DSCR8Q96T75 97 aa7.6□□□□□ -1.19
TCOF1-204ENST00000427724 MIR7-3HGQ8N6C7 128 aa7.59□□□□□ -1.19
TCOF1-204ENST00000427724 SYCNQ0VAF6 134 aa7.59□□□□□ -1.19
TCOF1-204ENST00000427724 DCHS2Q6V1P9 2916 aa7.59□□□□□ -1.19
TCOF1-204ENST00000427724 LINC01546A6NGU7 62 aa7.59□□□□□ -1.19
TCOF1-204ENST00000427724 CYSRT1A8MQ03 144 aa7.59□□□□□ -1.19
TCOF1-204ENST00000427724 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
TCOF1-204ENST00000427724 CELA1Q9UNI1 258 aa7.59□□□□□ -1.19
TCOF1-204ENST00000427724 IGLV5-52A0A0A0MRZ9 124 aa7.58□□□□□ -1.2
TCOF1-204ENST00000427724 PIK3CD-AS1Q5SR53 167 aa7.58□□□□□ -1.2
TCOF1-204ENST00000427724 ORMDL1Q9P0S3 153 aa7.58□□□□□ -1.2
TCOF1-204ENST00000427724 HRCT1Q6UXD1 115 aa7.58□□□□□ -1.2
TCOF1-204ENST00000427724 LINC00308Q8TCZ7 52 aa7.58□□□□□ -1.2
TCOF1-204ENST00000427724 A0A096LNI7 61 aa7.58□□□□□ -1.2
TCOF1-204ENST00000427724 KIF25-AS1Q9Y6Z4 181 aa7.58□□□□□ -1.2
TCOF1-204ENST00000427724 XAGE1AQ9HD64 81 aa7.57□□□□□ -1.2
TCOF1-204ENST00000427724 CSDC2Q9Y534 153 aaKnown RBP7.57□□□□□ -1.2
TCOF1-204ENST00000427724 POM121L12Q8N7R1 296 aa7.57□□□□□ -1.2
TCOF1-204ENST00000427724 CSMD1Q96PZ7 3565 aa7.56□□□□□ -1.2
TCOF1-204ENST00000427724 SLPIP03973 132 aa7.56□□□□□ -1.2
TCOF1-204ENST00000427724 KRTAP10-3P60369 221 aa7.56□□□□□ -1.2
TCOF1-204ENST00000427724 PYGO1Q9Y3Y4 419 aa7.56□□□□□ -1.2
TCOF1-204ENST00000427724 ADAMTSL4-AS1Q5T5F5 129 aa7.56□□□□□ -1.2
TCOF1-204ENST00000427724 A0A087WVE0 104 aa7.56□□□□□ -1.2
TCOF1-204ENST00000427724 FAM240AA0A1B0GVK7 77 aa7.56□□□□□ -1.2
TCOF1-204ENST00000427724 LINC00315P59091 139 aa7.56□□□□□ -1.2
TCOF1-204ENST00000427724 USP17L23D6RBM5 183 aa7.55□□□□□ -1.2
TCOF1-204ENST00000427724 H0YGX0 51 aa7.55□□□□□ -1.2
TCOF1-204ENST00000427724 UBE2D4Q9Y2X8 147 aa7.55□□□□□ -1.2
TCOF1-204ENST00000427724 CSMD2Q7Z408 3487 aa7.55□□□□□ -1.2
TCOF1-204ENST00000427724 NCR3O14931 201 aa7.55□□□□□ -1.2
TCOF1-204ENST00000427724 KRTAP10-11P60412 298 aa7.55□□□□□ -1.2
TCOF1-204ENST00000427724 WFDC10BQ8IUB3 73 aa7.54□□□□□ -1.2
TCOF1-204ENST00000427724 SERP2Q8N6R1 65 aa7.54□□□□□ -1.2
TCOF1-204ENST00000427724 MRPS36P82909 103 aaKnown RBP7.54□□□□□ -1.2
TCOF1-204ENST00000427724 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
TCOF1-204ENST00000427724 CELSR2Q9HCU4 2923 aa7.53□□□□□ -1.2
TCOF1-204ENST00000427724 CXCL5P42830 114 aa7.53□□□□□ -1.2
TCOF1-204ENST00000427724 TMEM258P61165 79 aa7.53□□□□□ -1.2
TCOF1-204ENST00000427724 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
TCOF1-204ENST00000427724 FHL2Q14192 279 aa7.52□□□□□ -1.2
TCOF1-204ENST00000427724 ENHOQ6UWT2 76 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms