RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 A0A1W2PPM0 123 aa11.67□□□□□ -0.54
FN1-208ENST00000426059 MEIG1Q5JSS6 88 aa11.67□□□□□ -0.54
FN1-208ENST00000426059 LINC00526Q96FQ7 95 aa11.67□□□□□ -0.54
FN1-208ENST00000426059 SPCS1Q9Y6A9 102 aa11.67□□□□□ -0.54
FN1-208ENST00000426059 SMIM13P0DJ93 91 aa11.66□□□□□ -0.54
FN1-208ENST00000426059 Q9HAA7 133 aa11.66□□□□□ -0.54
FN1-208ENST00000426059 DNAH10OSP0CZ25 163 aa11.65□□□□□ -0.54
FN1-208ENST00000426059 FBN3Q75N90 2809 aa11.65□□□□□ -0.54
FN1-208ENST00000426059 APOMO95445 188 aa11.65□□□□□ -0.54
FN1-208ENST00000426059 MIAQ16674 131 aa11.65□□□□□ -0.54
FN1-208ENST00000426059 DNAH7Q8WXX0 4024 aa11.65□□□□□ -0.55
FN1-208ENST00000426059 APLNQ9ULZ1 77 aa11.64□□□□□ -0.55
FN1-208ENST00000426059 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
FN1-208ENST00000426059 A4D1N5 150 aa11.64□□□□□ -0.55
FN1-208ENST00000426059 FABP2P12104 132 aa11.64□□□□□ -0.55
FN1-208ENST00000426059 KIAA0087Q14695 138 aa11.64□□□□□ -0.55
FN1-208ENST00000426059 Q8IZM0 81 aa11.63□□□□□ -0.55
FN1-208ENST00000426059 HERV-K104P63124 156 aa11.63□□□□□ -0.55
FN1-208ENST00000426059 CIRBPQ14011 172 aaKnown RBP11.63□□□□□ -0.55
FN1-208ENST00000426059 C6orf223Q8N319 242 aa11.63□□□□□ -0.55
FN1-208ENST00000426059 SPANXDQ9BXN6 97 aa11.63□□□□□ -0.55
FN1-208ENST00000426059 SPANXCQ9NY87 97 aa11.63□□□□□ -0.55
FN1-208ENST00000426059 IGKV2D-24A0A075B6R9 120 aa11.62□□□□□ -0.55
FN1-208ENST00000426059 KRTAP26-1Q6PEX3 210 aa11.62□□□□□ -0.55
FN1-208ENST00000426059 PFN2P35080 140 aa11.62□□□□□ -0.55
FN1-208ENST00000426059 LINC01561Q8N1V8 128 aa11.62□□□□□ -0.55
FN1-208ENST00000426059 TGP01266 2768 aa11.62□□□□□ -0.55
FN1-208ENST00000426059 DYNC2H1Q8NCM8 4307 aaKnown RBP11.61□□□□□ -0.55
FN1-208ENST00000426059 PLECQ15149 4684 aaKnown RBP11.61□□□□□ -0.55
FN1-208ENST00000426059 TIMM17BO60830 172 aa11.61□□□□□ -0.55
FN1-208ENST00000426059 CFC1BP0CG36 223 aa11.61□□□□□ -0.55
FN1-208ENST00000426059 CFC1P0CG37 223 aa11.61□□□□□ -0.55
FN1-208ENST00000426059 TMEM238LA0A1B0GVL6 79 aa11.61□□□□□ -0.55
FN1-208ENST00000426059 A6NJY4 79 aa11.61□□□□□ -0.55
FN1-208ENST00000426059 CKS1BP61024 79 aa11.61□□□□□ -0.55
FN1-208ENST00000426059 CFAP161Q6P656 301 aa11.6□□□□□ -0.55
FN1-208ENST00000426059 C1orf43Q9BWL3 253 aa11.6□□□□□ -0.55
FN1-208ENST00000426059 STARD9Q9P2P6 4700 aa11.6□□□□□ -0.55
FN1-208ENST00000426059 A0A1B0GWB2 263 aa11.59□□□□□ -0.55
FN1-208ENST00000426059 LINC00158P58513 81 aa11.59□□□□□ -0.55
FN1-208ENST00000426059 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
FN1-208ENST00000426059 SPAG11BQ08648 103 aa11.59□□□□□ -0.55
FN1-208ENST00000426059 SOSTDC1Q6X4U4 206 aa11.59□□□□□ -0.55
FN1-208ENST00000426059 C9orf116Q5BN46 136 aaPredicted RBP11.59□□□□□ -0.55
FN1-208ENST00000426059 LINC00308Q8TCZ7 52 aa11.59□□□□□ -0.55
FN1-208ENST00000426059 UPK3BQ9BT76 320 aa11.59□□□□□ -0.55
FN1-208ENST00000426059 HIGD2BQ4VC39 106 aa11.58□□□□□ -0.56
FN1-208ENST00000426059 UBE2DNLQ8IWF7 75 aa11.58□□□□□ -0.56
FN1-208ENST00000426059 MIR7-3HGQ8N6C7 128 aa11.58□□□□□ -0.56
FN1-208ENST00000426059 KLK5Q9Y337 293 aaPredicted RBP11.58□□□□□ -0.56
FN1-208ENST00000426059 C10orf25Q5T742 122 aa11.57□□□□□ -0.56
FN1-208ENST00000426059 NUPR2A6NF83 97 aa11.56□□□□□ -0.56
FN1-208ENST00000426059 UNQ6190/PRO20217Q6UXQ8 127 aa11.56□□□□□ -0.56
FN1-208ENST00000426059 ERG28Q9UKR5 140 aa11.56□□□□□ -0.56
FN1-208ENST00000426059 IBA57-AS1B1ANH7 110 aa11.56□□□□□ -0.56
FN1-208ENST00000426059 SFTA2Q6UW10 78 aa11.56□□□□□ -0.56
FN1-208ENST00000426059 DNAH1Q9P2D7 4330 aa11.56□□□□□ -0.56
FN1-208ENST00000426059 PGPEP1Q9NXJ5 209 aa11.55□□□□□ -0.56
FN1-208ENST00000426059 CASC10Q5T4H9 136 aa11.55□□□□□ -0.56
FN1-208ENST00000426059 KRTAP1-5Q9BYS1 174 aa11.55□□□□□ -0.56
FN1-208ENST00000426059 H7C2G1 150 aa11.54□□□□□ -0.56
FN1-208ENST00000426059 C15orf56Q8N910 161 aa11.54□□□□□ -0.56
FN1-208ENST00000426059 IFITM1P13164 125 aa11.53□□□□□ -0.56
FN1-208ENST00000426059 PRO1854Q9UHT4 67 aa11.52□□□□□ -0.57
FN1-208ENST00000426059 TSPAN13O95857 204 aa11.52□□□□□ -0.57
FN1-208ENST00000426059 CXCL5P42830 114 aa11.52□□□□□ -0.57
FN1-208ENST00000426059 SIGMAR1Q99720 223 aa11.51□□□□□ -0.57
FN1-208ENST00000426059 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.5□□□□□ -0.57
FN1-208ENST00000426059 ZNF561-AS1K7EIQ3 104 aa11.5□□□□□ -0.57
FN1-208ENST00000426059 NTN5Q8WTR8 489 aaPredicted RBP11.5□□□□□ -0.57
FN1-208ENST00000426059 DNAH10Q8IVF4 4471 aa11.5□□□□□ -0.57
FN1-208ENST00000426059 A0A0B4J2C4 111 aa11.49□□□□□ -0.57
FN1-208ENST00000426059 F8W1H4 67 aa11.49□□□□□ -0.57
FN1-208ENST00000426059 SCGB1A1P11684 91 aa11.49□□□□□ -0.57
FN1-208ENST00000426059 LECT2O14960 151 aa11.48□□□□□ -0.57
FN1-208ENST00000426059 J3QR89 54 aa11.48□□□□□ -0.57
FN1-208ENST00000426059 WFDC2Q14508 124 aa11.48□□□□□ -0.57
FN1-208ENST00000426059 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
FN1-208ENST00000426059 CAMK2N2Q96S95 79 aa11.47□□□□□ -0.57
FN1-208ENST00000426059 SND1-IT1Q9HBX3 110 aa11.46□□□□□ -0.57
FN1-208ENST00000426059 LOC107984156A0A0G2JMH3 177 aa11.46□□□□□ -0.58
FN1-208ENST00000426059 Q6ZRU5 148 aa11.46□□□□□ -0.58
FN1-208ENST00000426059 ARL17AQ8IVW1 177 aa11.46□□□□□ -0.58
FN1-208ENST00000426059 H3BMG7 143 aa11.45□□□□□ -0.58
FN1-208ENST00000426059 Q1RN00 199 aa11.45□□□□□ -0.58
FN1-208ENST00000426059 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
FN1-208ENST00000426059 USP17L23D6RBM5 183 aa11.44□□□□□ -0.58
FN1-208ENST00000426059 RPL13AP40429 203 aaKnown RBP11.43□□□□□ -0.58
FN1-208ENST00000426059 COX17Q14061 63 aa11.43□□□□□ -0.58
FN1-208ENST00000426059 ETDBQ3ZM63 59 aa11.43□□□□□ -0.58
FN1-208ENST00000426059 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
FN1-208ENST00000426059 GVQW2A0A096LPI5 108 aaPredicted RBP11.42□□□□□ -0.58
FN1-208ENST00000426059 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
FN1-208ENST00000426059 PRR3P79522 188 aaKnown RBP11.42□□□□□ -0.58
FN1-208ENST00000426059 RMI2Q96E14 147 aa11.42□□□□□ -0.58
FN1-208ENST00000426059 A0A1B0GV72 72 aa11.41□□□□□ -0.58
FN1-208ENST00000426059 PSMB2P49721 201 aa11.41□□□□□ -0.58
FN1-208ENST00000426059 LINC00337Q8N6G1 96 aa11.41□□□□□ -0.58
FN1-208ENST00000426059 MUC7Q8TAX7 377 aa11.41□□□□□ -0.58
FN1-208ENST00000426059 M0R2N4 97 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms