RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TMEM141Q96I45 108 aa6.78□□□□□ -1.32
SSBP3-206ENST00000420121 AMELXQ99217 191 aa6.78□□□□□ -1.32
SSBP3-206ENST00000420121 MAP1LC3AQ9H492 121 aa6.78□□□□□ -1.32
SSBP3-206ENST00000420121 PSORS1C2Q9UIG4 136 aa6.78□□□□□ -1.32
SSBP3-206ENST00000420121 TGIF2-C20orf24A0A0A6YYL0 155 aa6.77□□□□□ -1.33
SSBP3-206ENST00000420121 A0A1B0GV90 55 aa6.77□□□□□ -1.33
SSBP3-206ENST00000420121 FAM168BA1KXE4 195 aa6.77□□□□□ -1.33
SSBP3-206ENST00000420121 NDUFA1O15239 70 aa6.77□□□□□ -1.33
SSBP3-206ENST00000420121 C2orf66Q6UXQ4 117 aa6.77□□□□□ -1.33
SSBP3-206ENST00000420121 IGIPA6NJ69 53 aa6.76□□□□□ -1.33
SSBP3-206ENST00000420121 FAM19A3Q7Z5A8 133 aa6.76□□□□□ -1.33
SSBP3-206ENST00000420121 IMMP2LQ96T52 175 aa6.76□□□□□ -1.33
SSBP3-206ENST00000420121 C2orf88Q9BSF0 95 aa6.76□□□□□ -1.33
SSBP3-206ENST00000420121 CYSLTR1Q9Y271 337 aa6.76□□□□□ -1.33
SSBP3-206ENST00000420121 AKR1D1P51857 326 aa6.75□□□□□ -1.33
SSBP3-206ENST00000420121 REG3GQ6UW15 175 aa6.75□□□□□ -1.33
SSBP3-206ENST00000420121 C2orf82Q6UX34 121 aa6.75□□□□□ -1.33
SSBP3-206ENST00000420121 TEX43Q6ZNM6 134 aa6.75□□□□□ -1.33
SSBP3-206ENST00000420121 LINC01561Q8N1V8 128 aa6.75□□□□□ -1.33
SSBP3-206ENST00000420121 K7EMI3 77 aa6.74□□□□□ -1.33
SSBP3-206ENST00000420121 NPSP0C0P6 89 aa6.74□□□□□ -1.33
SSBP3-206ENST00000420121 ORMDL2Q53FV1 153 aa6.74□□□□□ -1.33
SSBP3-206ENST00000420121 LRP2P98164 4655 aa6.74□□□□□ -1.33
SSBP3-206ENST00000420121 TRBV30A0A0K0K1B3 111 aa6.73□□□□□ -1.33
SSBP3-206ENST00000420121 TMEM218A2RU14 115 aa6.73□□□□□ -1.33
SSBP3-206ENST00000420121 MT-ND6P03923 174 aa6.73□□□□□ -1.33
SSBP3-206ENST00000420121 KIAA1644Q3SXP7 199 aa6.73□□□□□ -1.33
SSBP3-206ENST00000420121 KRTAP4-12Q9BQ66 201 aa6.73□□□□□ -1.33
SSBP3-206ENST00000420121 CTDSP1Q9GZU7 261 aa6.73□□□□□ -1.33
SSBP3-206ENST00000420121 NXT2Q9NPJ8 142 aaKnown RBP6.73□□□□□ -1.33
SSBP3-206ENST00000420121 GAGE2EQ4V326 116 aa6.72□□□□□ -1.33
SSBP3-206ENST00000420121 C1orf137Q5JT78 98 aa6.72□□□□□ -1.33
SSBP3-206ENST00000420121 C9orf129Q5T035 196 aaKnown RBP6.72□□□□□ -1.33
SSBP3-206ENST00000420121 UQCC3Q6UW78 93 aa6.72□□□□□ -1.33
SSBP3-206ENST00000420121 FAM19A5Q7Z5A7 132 aaPredicted RBP6.72□□□□□ -1.33
SSBP3-206ENST00000420121 VCX2Q9H322 139 aa6.72□□□□□ -1.33
SSBP3-206ENST00000420121 GAGE2DQ9UEU5 116 aa6.72□□□□□ -1.33
SSBP3-206ENST00000420121 TMEM238C9JI98 176 aa6.71□□□□□ -1.34
SSBP3-206ENST00000420121 NDUFC2-KCTD14E9PQ53 114 aa6.71□□□□□ -1.34
SSBP3-206ENST00000420121 IGLV7-43P04211 117 aa6.71□□□□□ -1.34
SSBP3-206ENST00000420121 Q6ZN92 141 aa6.71□□□□□ -1.34
SSBP3-206ENST00000420121 TOMM6Q96B49 74 aa6.71□□□□□ -1.34
SSBP3-206ENST00000420121 TIMM17AQ99595 171 aa6.71□□□□□ -1.34
SSBP3-206ENST00000420121 TRAV9-1A0A075B6T8 112 aa6.7□□□□□ -1.34
SSBP3-206ENST00000420121 A4D1N5 150 aa6.7□□□□□ -1.34
SSBP3-206ENST00000420121 LINC01546A6NGU7 62 aa6.7□□□□□ -1.34
SSBP3-206ENST00000420121 CDKN2A-AS1Q9UH64 79 aa6.7□□□□□ -1.34
SSBP3-206ENST00000420121 SCO1O75880 301 aa6.69□□□□□ -1.34
SSBP3-206ENST00000420121 Q8IZM0 81 aa6.69□□□□□ -1.34
SSBP3-206ENST00000420121 SEC11CQ9BY50 192 aa6.69□□□□□ -1.34
SSBP3-206ENST00000420121 M0QXV9 152 aa6.68□□□□□ -1.34
SSBP3-206ENST00000420121 HERVK_113P63121 156 aa6.68□□□□□ -1.34
SSBP3-206ENST00000420121 ERASQ7Z444 233 aa6.68□□□□□ -1.34
SSBP3-206ENST00000420121 PACRGQ96M98 296 aaPredicted RBP6.68□□□□□ -1.34
SSBP3-206ENST00000420121 ALKBH7Q9BT30 221 aaPredicted RBP6.68□□□□□ -1.34
SSBP3-206ENST00000420121 GNB1LQ9BYB4 327 aa6.68□□□□□ -1.34
SSBP3-206ENST00000420121 TOMM7Q9P0U1 55 aa6.68□□□□□ -1.34
SSBP3-206ENST00000420121 H0Y9J4 135 aa6.67□□□□□ -1.34
SSBP3-206ENST00000420121 KRTAP1-4P0C5Y4 121 aa6.67□□□□□ -1.34
SSBP3-206ENST00000420121 C10orf91Q5T1B1 145 aa6.67□□□□□ -1.34
SSBP3-206ENST00000420121 LCE3BQ5TA77 95 aa6.67□□□□□ -1.34
SSBP3-206ENST00000420121 IGLV5-45A0A087WSX0 123 aa6.66□□□□□ -1.34
SSBP3-206ENST00000420121 SMIM1B2RUZ4 78 aa6.66□□□□□ -1.34
SSBP3-206ENST00000420121 PRSS2P07478 247 aa6.66□□□□□ -1.34
SSBP3-206ENST00000420121 SEC11AP67812 179 aa6.66□□□□□ -1.34
SSBP3-206ENST00000420121 C6orf226Q5I0X4 101 aa6.66□□□□□ -1.34
SSBP3-206ENST00000420121 PAPPA-AS1Q5QFB9 102 aa6.66□□□□□ -1.34
SSBP3-206ENST00000420121 DIRC1Q969H9 104 aa6.66□□□□□ -1.34
SSBP3-206ENST00000420121 SCGB3A1Q96QR1 104 aa6.66□□□□□ -1.34
SSBP3-206ENST00000420121 TINCRA0A1B0GVN0 87 aa6.65□□□□□ -1.34
SSBP3-206ENST00000420121 CKS1BP61024 79 aa6.65□□□□□ -1.34
SSBP3-206ENST00000420121 PET117Q6UWS5 81 aa6.65□□□□□ -1.34
SSBP3-206ENST00000420121 COMMD7Q86VX2 200 aa6.65□□□□□ -1.34
SSBP3-206ENST00000420121 PRR26Q8N8Z3 221 aa6.65□□□□□ -1.34
SSBP3-206ENST00000420121 C14orf144Q96I85 54 aa6.65□□□□□ -1.34
SSBP3-206ENST00000420121 GEMIN7Q9H840 131 aaKnown RBP6.65□□□□□ -1.34
SSBP3-206ENST00000420121 XAGE1AQ9HD64 81 aa6.65□□□□□ -1.34
SSBP3-206ENST00000420121 A0A096LNJ9 63 aa6.64□□□□□ -1.35
SSBP3-206ENST00000420121 F8VRH5 84 aa6.64□□□□□ -1.35
SSBP3-206ENST00000420121 UBE2BP63146 152 aa6.64□□□□□ -1.35
SSBP3-206ENST00000420121 URB1-AS1Q96HZ7 61 aa6.64□□□□□ -1.35
SSBP3-206ENST00000420121 CST9LQ9H4G1 147 aa6.64□□□□□ -1.35
SSBP3-206ENST00000420121 CARHSP1Q9Y2V2 147 aaKnown RBP6.64□□□□□ -1.35
SSBP3-206ENST00000420121 C22orf24Q9Y442 160 aa6.64□□□□□ -1.35
SSBP3-206ENST00000420121 LPAP08519 4548 aa6.63□□□□□ -1.35
SSBP3-206ENST00000420121 PDZD11Q5EBL8 140 aa6.63□□□□□ -1.35
SSBP3-206ENST00000420121 LINC01549A6NIU2 74 aa6.62□□□□□ -1.35
SSBP3-206ENST00000420121 DLEU1O43261 78 aa6.62□□□□□ -1.35
SSBP3-206ENST00000420121 CXCL5P42830 114 aa6.62□□□□□ -1.35
SSBP3-206ENST00000420121 COX19Q49B96 90 aa6.62□□□□□ -1.35
SSBP3-206ENST00000420121 COX7B2Q8TF08 81 aa6.62□□□□□ -1.35
SSBP3-206ENST00000420121 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
SSBP3-206ENST00000420121 SPINK8P0C7L1 97 aa6.61□□□□□ -1.35
SSBP3-206ENST00000420121 FABP9Q0Z7S8 132 aa6.61□□□□□ -1.35
SSBP3-206ENST00000420121 PMVKQ15126 192 aa6.61□□□□□ -1.35
SSBP3-206ENST00000420121 RHEBQ15382 184 aa6.61□□□□□ -1.35
SSBP3-206ENST00000420121 RPS10P5Q9NQ39 176 aa6.61□□□□□ -1.35
SSBP3-206ENST00000420121 TP73-AS1Q9UF72 201 aa6.61□□□□□ -1.35
SSBP3-206ENST00000420121 IGLV1-50A0A075B6I6 118 aa6.6□□□□□ -1.35
SSBP3-206ENST00000420121 FA2HQ7L5A8 372 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms