RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 LINC00337Q8N6G1 96 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 CFAP54Q96N23 3096 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 UNC79Q9P2D8 2635 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 KAAG1Q9UBP8 84 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 CDKN2A-AS1Q9UH64 79 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 KLK9Q9UKQ9 250 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 C5orf42Q9H799 3197 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 TRBV6-8A0A0A6YYG3 113 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 TRBV10-1A0A0K0K1A3 114 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 LOC100131303A0A0U1RQF7 123 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 GNRH2O43555 120 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 CCL4P13236 92 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 ELOF1P60002 83 aaKnown RBP2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 SYCNQ0VAF6 134 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 DEFB114Q30KQ6 69 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 CNEP1R1Q8N9A8 125 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 NKAPP1Q8N9T2 125 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 C11orf72Q8NBR9 251 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 CCL17Q92583 94 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 DIRC1Q969H9 104 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 PRO3102Q9H379 93 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 BDP1A6H8Y1 2624 aa2.2□□□□□ -2.06
SDCBPP3-201ENST00000419629 INTS1Q8N201 2190 aaKnown RBP2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGKV2-28A0A075B6P5 120 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 TRBV6-4A0A1B0GX49 114 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 CLPSL1A2RUU4 121 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 PSPHP1O15172 72 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGKV2D-28P01615 120 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 LINC00158P58513 81 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGFL3Q6UXB1 125 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 NTM-AS1Q6ZSK4 140 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 Q8N814 137 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 C1orf64Q8NEQ6 169 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 CHCHD7Q9BUK0 85 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 S4R3C0 116 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 TNCP24821 2201 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 CACNA1DQ01668 2161 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 MED12Q93074 2177 aa2.19□□□□□ -2.06
SDCBPP3-201ENST00000419629 ZDBF2Q9HCK1 2354 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 PCNX2A6NKB5 2137 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 WDFY4Q6ZS81 3184 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGHV7-81A0A0B4J1V7 117 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGHV3-66A0A0C4DH42 116 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 LCE6AA0A183 80 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 A6NN06 94 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 CHKB-CPT1BH3BT56 60 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 K7EMT4 169 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 NDUFA4O00483 81 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 PSCAO43653 123 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 LY6HO94772 140 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 COX7A1P24310 79 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 MINOS1Q5TGZ0 78 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 COX7B2Q8TF08 81 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 FAM104AQ969W3 186 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 LINC00467Q9BRT7 94 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 CDC42SE1Q9NRR8 79 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 USP34Q70CQ2 3546 aa2.18□□□□□ -2.06
SDCBPP3-201ENST00000419629 CFAP47Q6ZTR5 3102 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 SETXQ7Z333 2677 aaKnown RBP2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 DCHS1Q96JQ0 3298 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 A8MUN3 132 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 C16orf90A8MZG2 172 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 HCG22E2RYF7 251 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 CCL18P55774 89 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 ASB16-AS1Q495Z4 193 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 RNASE13Q5GAN3 156 aaKnown RBP2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 Q5VV11 94 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 DEFB123Q8N688 67 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 MUC7Q8TAX7 377 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 DEFB104AQ8WTQ1 72 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 Q9BRP9 147 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 MINOS1-NBL1R4GNA1 71 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 NACAE9PAV3 2078 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 SEC16AO15027 2179 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 NAV3Q8IVL0 2385 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 SPTBN4Q9H254 2564 aa2.17□□□□□ -2.06
SDCBPP3-201ENST00000419629 ZFHX4Q86UP3 3567 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 CDH23Q9H251 3354 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGHV3OR16-8A0A075B7F1 116 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 A0A1B0GW54 56 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 A6NED7 52 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 ODF3BA8MYP8 253 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGHV3-53P01767 116 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGKV4-1P06312 121 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 COX7BP24311 80 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 COX6A2Q02221 97 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 LINC00575Q6W349 94 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 Q6ZTI0 123 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 DEFB119Q8N690 84 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 ZCCHC13Q8WW36 166 aaKnown RBP2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 HIGD2AQ9BW72 106 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 CHD8Q9HCK8 2581 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 DSCAML1Q8TD84 2053 aa2.16□□□□□ -2.06
SDCBPP3-201ENST00000419629 REV3LO60673 3130 aa2.15□□□□□ -2.06
SDCBPP3-201ENST00000419629 ARFGEF3Q5TH69 2177 aa2.15□□□□□ -2.07
SDCBPP3-201ENST00000419629 IGHV3OR16-13A0A075B7E8 117 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms