RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 Q6ZVQ6 151 aa11.91□□□□□ -0.5
SYNGAP1-202ENST00000418600 PRR14LQ5THK1 2151 aa11.91□□□□□ -0.5
SYNGAP1-202ENST00000418600 X6R8D5 127 aa11.91□□□□□ -0.5
SYNGAP1-202ENST00000418600 LIMD2Q9BT23 127 aa11.91□□□□□ -0.5
SYNGAP1-202ENST00000418600 A0A096LNT2 108 aa11.91□□□□□ -0.5
SYNGAP1-202ENST00000418600 ABCA2Q9BZC7 2435 aa11.91□□□□□ -0.5
SYNGAP1-202ENST00000418600 LINC00336Q6ZUF6 198 aa11.9□□□□□ -0.5
SYNGAP1-202ENST00000418600 IMUPQ9GZP8 106 aa11.9□□□□□ -0.5
SYNGAP1-202ENST00000418600 RPL37AP61513 92 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-202ENST00000418600 KRTAP1-3Q8IUG1 177 aa11.89□□□□□ -0.51
SYNGAP1-202ENST00000418600 A0A1B0GUV1 79 aa11.89□□□□□ -0.51
SYNGAP1-202ENST00000418600 NRACQ8N912 160 aa11.89□□□□□ -0.51
SYNGAP1-202ENST00000418600 LST1O00453 97 aa11.89□□□□□ -0.51
SYNGAP1-202ENST00000418600 KRTAP10-3P60369 221 aa11.88□□□□□ -0.51
SYNGAP1-202ENST00000418600 POLR2KP53803 58 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-202ENST00000418600 Q6JHZ5 121 aa11.88□□□□□ -0.51
SYNGAP1-202ENST00000418600 A8MZ25 164 aa11.87□□□□□ -0.51
SYNGAP1-202ENST00000418600 LINC00588Q9Y4M8 146 aa11.87□□□□□ -0.51
SYNGAP1-202ENST00000418600 Q8NAQ8 132 aa11.87□□□□□ -0.51
SYNGAP1-202ENST00000418600 SERP2Q8N6R1 65 aa11.86□□□□□ -0.51
SYNGAP1-202ENST00000418600 C9orf116Q5BN46 136 aaPredicted RBP11.86□□□□□ -0.51
SYNGAP1-202ENST00000418600 CHD8Q9HCK8 2581 aa11.86□□□□□ -0.51
SYNGAP1-202ENST00000418600 SMIM11BQ8TCY0 68 aa11.85□□□□□ -0.51
SYNGAP1-202ENST00000418600 Q6ZSN1 163 aa11.85□□□□□ -0.51
SYNGAP1-202ENST00000418600 PCSK5Q92824 1860 aa11.85□□□□□ -0.51
SYNGAP1-202ENST00000418600 COL27A1Q8IZC6 1860 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-202ENST00000418600 A6NED7 52 aa11.84□□□□□ -0.51
SYNGAP1-202ENST00000418600 LINC00694P0DN24 101 aa11.84□□□□□ -0.51
SYNGAP1-202ENST00000418600 MAPKAPK5-AS1Q8N8E1 139 aa11.83□□□□□ -0.52
SYNGAP1-202ENST00000418600 PRYO14603 147 aa11.83□□□□□ -0.52
SYNGAP1-202ENST00000418600 LRRK2Q5S007 2527 aa11.82□□□□□ -0.52
SYNGAP1-202ENST00000418600 Q6ZRU5 148 aa11.82□□□□□ -0.52
SYNGAP1-202ENST00000418600 MT-ATP8P03928 68 aa11.81□□□□□ -0.52
SYNGAP1-202ENST00000418600 ANKRD11Q6UB99 2663 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-202ENST00000418600 C19orf73Q9NVV2 129 aa11.8□□□□□ -0.52
SYNGAP1-202ENST00000418600 TLN1Q9Y490 2541 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-202ENST00000418600 Q6ZRP5 223 aa11.8□□□□□ -0.52
SYNGAP1-202ENST00000418600 C11orf72Q8NBR9 251 aa11.8□□□□□ -0.52
SYNGAP1-202ENST00000418600 SPTBN4Q9H254 2564 aa11.8□□□□□ -0.52
SYNGAP1-202ENST00000418600 LINC00242Q5T6M2 205 aa11.79□□□□□ -0.52
SYNGAP1-202ENST00000418600 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
SYNGAP1-202ENST00000418600 Q9BRP9 147 aa11.77□□□□□ -0.52
SYNGAP1-202ENST00000418600 NTM-AS1Q6ZSK4 140 aa11.77□□□□□ -0.53
SYNGAP1-202ENST00000418600 CSDC2Q9Y534 153 aaKnown RBP11.77□□□□□ -0.53
SYNGAP1-202ENST00000418600 TRBV10-3A0A0K0K1G6 114 aa11.75□□□□□ -0.53
SYNGAP1-202ENST00000418600 TM2D3Q9BRN9 247 aa11.75□□□□□ -0.53
SYNGAP1-202ENST00000418600 CNFNQ9BYD5 112 aa11.75□□□□□ -0.53
SYNGAP1-202ENST00000418600 FAM30AQ9NZY2 134 aa11.75□□□□□ -0.53
SYNGAP1-202ENST00000418600 MYO18BQ8IUG5 2567 aa11.75□□□□□ -0.53
SYNGAP1-202ENST00000418600 LINC01561Q8N1V8 128 aa11.75□□□□□ -0.53
SYNGAP1-202ENST00000418600 SNURFQ9Y675 71 aa11.75□□□□□ -0.53
SYNGAP1-202ENST00000418600 C22orf24Q9Y442 160 aa11.74□□□□□ -0.53
SYNGAP1-202ENST00000418600 Q6Q795 121 aa11.74□□□□□ -0.53
SYNGAP1-202ENST00000418600 IGHV6-1A0A0B4J1U7 121 aa11.72□□□□□ -0.53
SYNGAP1-202ENST00000418600 TYMSOSQ8TAI1 123 aa11.71□□□□□ -0.53
SYNGAP1-202ENST00000418600 JMJD1CQ15652 2540 aa11.71□□□□□ -0.53
SYNGAP1-202ENST00000418600 COX7CP15954 63 aa11.71□□□□□ -0.53
SYNGAP1-202ENST00000418600 KIF25-AS1Q9Y6Z4 181 aa11.71□□□□□ -0.53
SYNGAP1-202ENST00000418600 SMIM1B2RUZ4 78 aa11.71□□□□□ -0.54
SYNGAP1-202ENST00000418600 PRLHP81277 87 aa11.71□□□□□ -0.54
SYNGAP1-202ENST00000418600 Q8N814 137 aa11.71□□□□□ -0.54
SYNGAP1-202ENST00000418600 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.54
SYNGAP1-202ENST00000418600 PRR4Q16378 134 aa11.7□□□□□ -0.54
SYNGAP1-202ENST00000418600 GAS8-AS1O95177 125 aa11.7□□□□□ -0.54
SYNGAP1-202ENST00000418600 CRYGAP11844 174 aa11.69□□□□□ -0.54
SYNGAP1-202ENST00000418600 HCFC1P51610 2035 aa11.69□□□□□ -0.54
SYNGAP1-202ENST00000418600 IGIPA6NJ69 53 aa11.69□□□□□ -0.54
SYNGAP1-202ENST00000418600 TRAV7A0A075B6U4 112 aa11.68□□□□□ -0.54
SYNGAP1-202ENST00000418600 TRBV7-6A0A0J9YX20 115 aa11.68□□□□□ -0.54
SYNGAP1-202ENST00000418600 PKD1L2Q7Z442 2459 aa11.67□□□□□ -0.54
SYNGAP1-202ENST00000418600 SPACA4Q8TDM5 124 aa11.67□□□□□ -0.54
SYNGAP1-202ENST00000418600 LINC00208Q96KT6 92 aa11.67□□□□□ -0.54
SYNGAP1-202ENST00000418600 SORL1Q92673 2214 aa11.65□□□□□ -0.54
SYNGAP1-202ENST00000418600 SMCR5Q8TEV8 140 aa11.65□□□□□ -0.54
SYNGAP1-202ENST00000418600 A0A0U1RQV1 116 aa11.64□□□□□ -0.55
SYNGAP1-202ENST00000418600 PHF5AQ7RTV0 110 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-202ENST00000418600 CHTF8P0CG12 524 aa11.64□□□□□ -0.55
SYNGAP1-202ENST00000418600 DNAH10OSP0CZ25 163 aa11.64□□□□□ -0.55
SYNGAP1-202ENST00000418600 CASC10Q5T4H9 136 aa11.64□□□□□ -0.55
SYNGAP1-202ENST00000418600 SMIM26A0A096LP01 95 aa11.63□□□□□ -0.55
SYNGAP1-202ENST00000418600 RETNLBQ9BQ08 111 aa11.63□□□□□ -0.55
SYNGAP1-202ENST00000418600 FASNP49327 2511 aaKnown RBP11.63□□□□□ -0.55
SYNGAP1-202ENST00000418600 COX8CQ7Z4L0 72 aa11.63□□□□□ -0.55
SYNGAP1-202ENST00000418600 SMR3BP02814 79 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-202ENST00000418600 EPM2AB3EWF7 344 aa11.61□□□□□ -0.55
SYNGAP1-202ENST00000418600 FAM19A4Q96LR4 140 aa11.61□□□□□ -0.55
SYNGAP1-202ENST00000418600 PRR3P79522 188 aaKnown RBP11.61□□□□□ -0.55
SYNGAP1-202ENST00000418600 LINC01547P58512 204 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-202ENST00000418600 C2orf91Q6ZV80 131 aa11.6□□□□□ -0.55
SYNGAP1-202ENST00000418600 ZFYVE26Q68DK2 2539 aa11.59□□□□□ -0.55
SYNGAP1-202ENST00000418600 AMELXQ99217 191 aa11.59□□□□□ -0.55
SYNGAP1-202ENST00000418600 MOBPQ13875 183 aa11.58□□□□□ -0.56
SYNGAP1-202ENST00000418600 LINC00476Q8WZB0 136 aa11.58□□□□□ -0.56
SYNGAP1-202ENST00000418600 APLNQ9ULZ1 77 aa11.57□□□□□ -0.56
SYNGAP1-202ENST00000418600 A0A087WSZ3 146 aa11.57□□□□□ -0.56
SYNGAP1-202ENST00000418600 ABCA12Q86UK0 2595 aa11.56□□□□□ -0.56
SYNGAP1-202ENST00000418600 ANKRD17O75179 2603 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-202ENST00000418600 PLXNB1O43157 2135 aa11.55□□□□□ -0.56
SYNGAP1-202ENST00000418600 YPEL4Q96NS1 127 aa11.55□□□□□ -0.56
SYNGAP1-202ENST00000418600 LINC00167Q96N53 147 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms