RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 HERC1Q15751 4861 aa8.72□□□□□ -1.01
SDCCAG3-205ENST00000417512 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.71□□□□□ -1.02
SDCCAG3-205ENST00000417512 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.02
SDCCAG3-205ENST00000417512 A0A0J9YXY3 114 aa8.71□□□□□ -1.02
SDCCAG3-205ENST00000417512 TAX1BP3O14907 124 aa8.71□□□□□ -1.02
SDCCAG3-205ENST00000417512 SPINK8P0C7L1 97 aa8.71□□□□□ -1.02
SDCCAG3-205ENST00000417512 TTC32Q5I0X7 151 aa8.71□□□□□ -1.02
SDCCAG3-205ENST00000417512 KRTAP3-3Q9BYR6 98 aa8.71□□□□□ -1.02
SDCCAG3-205ENST00000417512 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.02
SDCCAG3-205ENST00000417512 NHP2Q9NX24 153 aaKnown RBP8.71□□□□□ -1.02
SDCCAG3-205ENST00000417512 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
SDCCAG3-205ENST00000417512 IFITM1P13164 125 aa8.7□□□□□ -1.02
SDCCAG3-205ENST00000417512 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
SDCCAG3-205ENST00000417512 VAMP3Q15836 100 aa8.7□□□□□ -1.02
SDCCAG3-205ENST00000417512 IGHV3-64A0A075B6Q5 118 aa8.69□□□□□ -1.02
SDCCAG3-205ENST00000417512 A0A1B0GWB2 263 aa8.69□□□□□ -1.02
SDCCAG3-205ENST00000417512 SMIM1B2RUZ4 78 aa8.69□□□□□ -1.02
SDCCAG3-205ENST00000417512 FABP2P12104 132 aa8.69□□□□□ -1.02
SDCCAG3-205ENST00000417512 FXYD2P54710 66 aa8.69□□□□□ -1.02
SDCCAG3-205ENST00000417512 RBX1P62877 108 aa8.69□□□□□ -1.02
SDCCAG3-205ENST00000417512 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
SDCCAG3-205ENST00000417512 SPANXCQ9NY87 97 aa8.69□□□□□ -1.02
SDCCAG3-205ENST00000417512 PPDPFQ9H3Y8 114 aa8.68□□□□□ -1.02
SDCCAG3-205ENST00000417512 PGPEP1Q9NXJ5 209 aa8.68□□□□□ -1.02
SDCCAG3-205ENST00000417512 LRP1BQ9NZR2 4599 aa8.67□□□□□ -1.02
SDCCAG3-205ENST00000417512 TRAV8-3A0A0A6YYJ7 113 aa8.67□□□□□ -1.02
SDCCAG3-205ENST00000417512 APOBP04114 4563 aaKnown RBP8.67□□□□□ -1.02
SDCCAG3-205ENST00000417512 DMBT1Q9UGM3 2413 aaPredicted RBP8.66□□□□□ -1.02
SDCCAG3-205ENST00000417512 A0A087WZ39 114 aa8.66□□□□□ -1.02
SDCCAG3-205ENST00000417512 LINC00959A0A1B0GUT2 108 aa8.66□□□□□ -1.02
SDCCAG3-205ENST00000417512 CXCL5P42830 114 aa8.66□□□□□ -1.02
SDCCAG3-205ENST00000417512 MIAQ16674 131 aa8.66□□□□□ -1.02
SDCCAG3-205ENST00000417512 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 A0A096LPF7 62 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 APOMO95445 188 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 IGHV3-30P01768 117 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 CRPP02741 224 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 ANGP03950 147 aaKnown RBP8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 PRSS2P07478 247 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 IGHV3-30-5P0DP03 117 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 UBE2V1Q13404 147 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 Q5VSD8 79 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 C10orf126Q8N4M7 172 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
SDCCAG3-205ENST00000417512 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
SDCCAG3-205ENST00000417512 A0A0B4J2C4 111 aa8.64□□□□□ -1.03
SDCCAG3-205ENST00000417512 IGKV3OR2-268A0A0C4DH90 116 aa8.64□□□□□ -1.03
SDCCAG3-205ENST00000417512 A0A1W2PPM0 123 aa8.64□□□□□ -1.03
SDCCAG3-205ENST00000417512 MEIG1Q5JSS6 88 aa8.64□□□□□ -1.03
SDCCAG3-205ENST00000417512 RAB37Q96AX2 223 aa8.64□□□□□ -1.03
SDCCAG3-205ENST00000417512 DNAH5Q8TE73 4624 aa8.64□□□□□ -1.03
SDCCAG3-205ENST00000417512 TRAV8-4A0A0B4J246 113 aa8.63□□□□□ -1.03
SDCCAG3-205ENST00000417512 GAGE10A6NGK3 116 aa8.63□□□□□ -1.03
SDCCAG3-205ENST00000417512 H3BUT2 72 aa8.63□□□□□ -1.03
SDCCAG3-205ENST00000417512 XGP55808 180 aa8.63□□□□□ -1.03
SDCCAG3-205ENST00000417512 COX6A2Q02221 97 aa8.63□□□□□ -1.03
SDCCAG3-205ENST00000417512 REG3AQ06141 175 aa8.63□□□□□ -1.03
SDCCAG3-205ENST00000417512 ESRGQ1W209 222 aa8.63□□□□□ -1.03
SDCCAG3-205ENST00000417512 CD164L2Q6UWJ8 174 aa8.63□□□□□ -1.03
SDCCAG3-205ENST00000417512 COX7A2LO14548 114 aa8.62□□□□□ -1.03
SDCCAG3-205ENST00000417512 UPK3BQ9BT76 320 aa8.62□□□□□ -1.03
SDCCAG3-205ENST00000417512 J3QL48 77 aa8.61□□□□□ -1.03
SDCCAG3-205ENST00000417512 K7EP34 96 aa8.61□□□□□ -1.03
SDCCAG3-205ENST00000417512 MALP21145 153 aa8.61□□□□□ -1.03
SDCCAG3-205ENST00000417512 FUSP35637 526 aaKnown RBP eCLIP8.61□□□□□ -1.03
SDCCAG3-205ENST00000417512 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
SDCCAG3-205ENST00000417512 Q8IZM0 81 aa8.61□□□□□ -1.03
SDCCAG3-205ENST00000417512 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
SDCCAG3-205ENST00000417512 PRO1854Q9UHT4 67 aa8.61□□□□□ -1.03
SDCCAG3-205ENST00000417512 SPCS1Q9Y6A9 102 aa8.61□□□□□ -1.03
SDCCAG3-205ENST00000417512 FAM229AH3BQW9 127 aa8.6□□□□□ -1.03
SDCCAG3-205ENST00000417512 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
SDCCAG3-205ENST00000417512 XCL1P47992 114 aa8.6□□□□□ -1.03
SDCCAG3-205ENST00000417512 LYPD5Q6UWN5 251 aa8.6□□□□□ -1.03
SDCCAG3-205ENST00000417512 LINC00269Q8N2A0 174 aa8.6□□□□□ -1.03
SDCCAG3-205ENST00000417512 IBA57-AS1B1ANH7 110 aa8.59□□□□□ -1.03
SDCCAG3-205ENST00000417512 CHCHD10Q8WYQ3 142 aaPredicted RBP8.59□□□□□ -1.03
SDCCAG3-205ENST00000417512 TOMM7Q9P0U1 55 aa8.59□□□□□ -1.03
SDCCAG3-205ENST00000417512 A4D1N5 150 aa8.58□□□□□ -1.04
SDCCAG3-205ENST00000417512 K7ERJ3 54 aa8.58□□□□□ -1.04
SDCCAG3-205ENST00000417512 CKS1BP61024 79 aa8.58□□□□□ -1.04
SDCCAG3-205ENST00000417512 C6orf226Q5I0X4 101 aa8.58□□□□□ -1.04
SDCCAG3-205ENST00000417512 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
SDCCAG3-205ENST00000417512 LITAFQ99732 161 aa8.58□□□□□ -1.04
SDCCAG3-205ENST00000417512 PRR34Q9NV39 138 aa8.58□□□□□ -1.04
SDCCAG3-205ENST00000417512 TRBV20-1A0A075B6N2 111 aa8.57□□□□□ -1.04
SDCCAG3-205ENST00000417512 K7EP13 123 aa8.57□□□□□ -1.04
SDCCAG3-205ENST00000417512 ERG28Q9UKR5 140 aa8.57□□□□□ -1.04
SDCCAG3-205ENST00000417512 COX6CP09669 75 aa8.56□□□□□ -1.04
SDCCAG3-205ENST00000417512 KRTAP10-1P60331 282 aa8.56□□□□□ -1.04
SDCCAG3-205ENST00000417512 COX17Q14061 63 aa8.56□□□□□ -1.04
SDCCAG3-205ENST00000417512 Q1RN00 199 aa8.56□□□□□ -1.04
SDCCAG3-205ENST00000417512 CLPSL2Q6UWE3 100 aa8.56□□□□□ -1.04
SDCCAG3-205ENST00000417512 Q6ZRN7 208 aaPredicted RBP8.56□□□□□ -1.04
SDCCAG3-205ENST00000417512 C5orf38Q86SI9 138 aa8.56□□□□□ -1.04
SDCCAG3-205ENST00000417512 CFC1BP0CG36 223 aa8.55□□□□□ -1.04
SDCCAG3-205ENST00000417512 CFC1P0CG37 223 aa8.55□□□□□ -1.04
SDCCAG3-205ENST00000417512 LINC01556Q5JQF7 62 aa8.55□□□□□ -1.04
SDCCAG3-205ENST00000417512 TSPAN13O95857 204 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms