RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 DEFB108AA8MXU0 73 aa4.34□□□□□ -1.72
CLIP4-205ENST00000415891 TLX1NBP0CAT3 122 aa4.34□□□□□ -1.72
CLIP4-205ENST00000415891 SPINK2P20155 84 aa4.34□□□□□ -1.72
CLIP4-205ENST00000415891 SPTBN4Q9H254 2564 aa4.34□□□□□ -1.72
CLIP4-205ENST00000415891 LOC110117498A0A087WWA1 95 aa4.33□□□□□ -1.72
CLIP4-205ENST00000415891 RPL39P5Q59GN2 51 aa4.33□□□□□ -1.72
CLIP4-205ENST00000415891 CHD9Q3L8U1 2897 aa4.33□□□□□ -1.72
CLIP4-205ENST00000415891 SDK1Q7Z5N4 2213 aa4.33□□□□□ -1.72
CLIP4-205ENST00000415891 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
CLIP4-205ENST00000415891 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
CLIP4-205ENST00000415891 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
CLIP4-205ENST00000415891 CCL26Q9Y258 94 aa4.33□□□□□ -1.72
CLIP4-205ENST00000415891 NAV3Q8IVL0 2385 aa4.32□□□□□ -1.72
CLIP4-205ENST00000415891 REV3LO60673 3130 aa4.32□□□□□ -1.72
CLIP4-205ENST00000415891 IGHV3-53P01767 116 aa4.32□□□□□ -1.72
CLIP4-205ENST00000415891 PDE6HQ13956 83 aa4.32□□□□□ -1.72
CLIP4-205ENST00000415891 C9orf47Q6ZRZ4 202 aa4.32□□□□□ -1.72
CLIP4-205ENST00000415891 WFDC10AQ9H1F0 79 aa4.32□□□□□ -1.72
CLIP4-205ENST00000415891 TRANK1O15050 2925 aa4.31□□□□□ -1.72
CLIP4-205ENST00000415891 CHD7Q9P2D1 2997 aa4.31□□□□□ -1.72
CLIP4-205ENST00000415891 NTM-AS1Q6ZSK4 140 aa4.31□□□□□ -1.72
CLIP4-205ENST00000415891 C15orf56Q8N910 161 aa4.31□□□□□ -1.72
CLIP4-205ENST00000415891 A0A087WYN8 130 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 IGHV1-18A0A0C4DH31 117 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 IGKV2-29A2NJV5 120 aaPredicted RBP4.3□□□□□ -1.72
CLIP4-205ENST00000415891 NDUFA4O00483 81 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 KRTAP26-1Q6PEX3 210 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 DEFB126Q9BYW3 111 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 CACNA1HO95180 2353 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 CADP27708 2225 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 H0Y9P7 68 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 H3BPC8 53 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 IGKV3-20P01619 116 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 Q6ZTI0 123 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 FAM186AA6NE01 2351 aa4.3□□□□□ -1.72
CLIP4-205ENST00000415891 ERHP84090 104 aaKnown RBP4.29□□□□□ -1.72
CLIP4-205ENST00000415891 LINC00308Q8TCZ7 52 aa4.29□□□□□ -1.72
CLIP4-205ENST00000415891 ABCA4P78363 2273 aa4.29□□□□□ -1.72
CLIP4-205ENST00000415891 ODF3BA8MYP8 253 aa4.29□□□□□ -1.72
CLIP4-205ENST00000415891 GAFA1Q96PS6 74 aa4.29□□□□□ -1.72
CLIP4-205ENST00000415891 KMT2BQ9UMN6 2715 aaPredicted RBP4.29□□□□□ -1.72
CLIP4-205ENST00000415891 TECTAO75443 2155 aa4.28□□□□□ -1.72
CLIP4-205ENST00000415891 BAHCC1Q9P281 2608 aa4.28□□□□□ -1.72
CLIP4-205ENST00000415891 IGKV3-15P01624 115 aa4.28□□□□□ -1.72
CLIP4-205ENST00000415891 DEFB114Q30KQ6 69 aa4.28□□□□□ -1.72
CLIP4-205ENST00000415891 C1orf137Q5JT78 98 aa4.28□□□□□ -1.72
CLIP4-205ENST00000415891 TMEM105Q8N8V8 129 aa4.28□□□□□ -1.72
CLIP4-205ENST00000415891 CACNA1GO43497 2377 aa4.27□□□□□ -1.73
CLIP4-205ENST00000415891 PTPRZ1P23471 2315 aaPredicted RBP4.27□□□□□ -1.73
CLIP4-205ENST00000415891 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.27□□□□□ -1.73
CLIP4-205ENST00000415891 IGKV4-1P06312 121 aa4.27□□□□□ -1.73
CLIP4-205ENST00000415891 WT1-ASQ06250 92 aa4.27□□□□□ -1.73
CLIP4-205ENST00000415891 PATE1Q8WXA2 126 aa4.27□□□□□ -1.73
CLIP4-205ENST00000415891 MINOS1-NBL1R4GNA1 71 aa4.27□□□□□ -1.73
CLIP4-205ENST00000415891 PKD1L2Q7Z442 2459 aa4.27□□□□□ -1.73
CLIP4-205ENST00000415891 VPS13AQ96RL7 3174 aa4.27□□□□□ -1.73
CLIP4-205ENST00000415891 CFAP54Q96N23 3096 aa4.27□□□□□ -1.73
CLIP4-205ENST00000415891 EPG5Q9HCE0 2579 aa4.27□□□□□ -1.73
CLIP4-205ENST00000415891 SMIM1B2RUZ4 78 aa4.26□□□□□ -1.73
CLIP4-205ENST00000415891 RIF1Q5UIP0 2472 aaKnown RBP4.26□□□□□ -1.73
CLIP4-205ENST00000415891 TPRP12270 2363 aaKnown RBP4.26□□□□□ -1.73
CLIP4-205ENST00000415891 IGLV4-60A0A075B6I1 120 aa4.26□□□□□ -1.73
CLIP4-205ENST00000415891 IGLV5-39A0A0G2JS06 123 aa4.26□□□□□ -1.73
CLIP4-205ENST00000415891 PRB1P04280 392 aa4.26□□□□□ -1.73
CLIP4-205ENST00000415891 CCL18P55774 89 aa4.26□□□□□ -1.73
CLIP4-205ENST00000415891 SUMO4Q6EEV6 95 aa4.26□□□□□ -1.73
CLIP4-205ENST00000415891 Q9Y3F1 56 aa4.26□□□□□ -1.73
CLIP4-205ENST00000415891 ABCA1O95477 2261 aa4.26□□□□□ -1.73
CLIP4-205ENST00000415891 IGKV2-40A0A087WW87 121 aaPredicted RBP4.25□□□□□ -1.73
CLIP4-205ENST00000415891 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 IGKV2D-40P01614 121 aaPredicted RBP4.25□□□□□ -1.73
CLIP4-205ENST00000415891 LYZP61626 148 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 WDFY4Q6ZS81 3184 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 LINC00959A0A1B0GUT2 108 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 PRB2P02812 416 aaPredicted RBP4.25□□□□□ -1.73
CLIP4-205ENST00000415891 C10orf25Q5T742 122 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 SPINK14Q6IE38 97 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 SPATA8Q6RVD6 105 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 COA5Q86WW8 74 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 DMAC1Q96GE9 116 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 SPRR4Q96PI1 79 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 GVINP1Q7Z2Y8 2422 aa4.25□□□□□ -1.73
CLIP4-205ENST00000415891 IGHV3-64A0A075B6Q5 118 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 IGHV3-64DA0A0J9YX35 117 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 H3BRN7 92 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 PANO1I0J062 215 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 RNASE3P12724 160 aaKnown RBP4.24□□□□□ -1.73
CLIP4-205ENST00000415891 DEFB112Q30KQ8 113 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 RPL39LQ96EH5 51 aaKnown RBP4.24□□□□□ -1.73
CLIP4-205ENST00000415891 IGKV3-7A0A075B6H7 116 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 IGLV11-55A0A075B6I3 123 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.24□□□□□ -1.73
CLIP4-205ENST00000415891 ETDCA0A1B0GVM5 59 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 NUPR2A6NF83 97 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 NDUFA1O15239 70 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 Q8NBF4 154 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 MGAQ8IWI9 3026 aa4.24□□□□□ -1.73
CLIP4-205ENST00000415891 ZFHX2Q9C0A1 2572 aaPredicted RBP4.23□□□□□ -1.73
CLIP4-205ENST00000415891 TRGV2A0A075B6R0 118 aa4.23□□□□□ -1.73
CLIP4-205ENST00000415891 C9orf163Q8N9P6 203 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms