RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LINC00959A0A1B0GUT2 108 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 PPBPP02775 128 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 RAB5AP20339 215 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 S100PP25815 95 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 IFI27P40305 119 aaPredicted RBP3.14□□□□□ -1.91
VPS41-205ENST00000414632 RPL32P62910 135 aaKnown RBP3.14□□□□□ -1.91
VPS41-205ENST00000414632 RHEBQ15382 184 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 C14orf177Q52M58 125 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 ZC2HC1BQ5TFG8 222 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 MRPL52Q86TS9 123 aaKnown RBP3.14□□□□□ -1.91
VPS41-205ENST00000414632 PKHD1L1Q86WI1 4243 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 E9PLD3 99 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 PHOX2AO14813 284 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 FABP9Q0Z7S8 132 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 SS18Q15532 418 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 Q5VSD8 79 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 C5orf38Q86SI9 138 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 Q8N8P6 123 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 FAM104AQ969W3 186 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 PPDPFQ9H3Y8 114 aa3.13□□□□□ -1.91
VPS41-205ENST00000414632 TRAV9-1A0A075B6T8 112 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 PANO1I0J062 215 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 CHTF8P0CG12 524 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 RPL13AP40429 203 aaKnown RBP3.12□□□□□ -1.91
VPS41-205ENST00000414632 SMAGPQ0VAQ4 97 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 C6orf226Q5I0X4 101 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 C2orf66Q6UXQ4 117 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 SCXQ7RTU7 201 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 SVBPQ8N300 66 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 Q8N377 158 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 MTURNQ8N3F0 131 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 C14orf144Q96I85 54 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 GNB1LQ9BYB4 327 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 LAMTOR2Q9Y2Q5 125 aa3.12□□□□□ -1.91
VPS41-205ENST00000414632 GVQW2A0A096LPI5 108 aaPredicted RBP3.11□□□□□ -1.91
VPS41-205ENST00000414632 IGHV1-58A0A0C4DH39 117 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 IGKV2-24A0A0C4DH68 120 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 C1orf196B1AJZ1 125 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 COX7A2LO14548 114 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 G0S2P27469 103 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 CNBPP62633 177 aaKnown RBP3.11□□□□□ -1.91
VPS41-205ENST00000414632 ORMDL2Q53FV1 153 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 Q6ZSA8 131 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 CBLN2Q8IUK8 224 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 C9orf163Q8N9P6 203 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 CIRBP-AS1Q8TBR5 109 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 TIMM21Q9BVV7 248 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 SPANXA1Q9NS26 97 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 DHRS4-AS1Q9P1J3 65 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 CYSLTR1Q9Y271 337 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 CSDC2Q9Y534 153 aaKnown RBP3.11□□□□□ -1.91
VPS41-205ENST00000414632 TRAPPC1Q9Y5R8 145 aa3.11□□□□□ -1.91
VPS41-205ENST00000414632 MYCBP2O75592 4640 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 IGLV4-69A0A075B6H9 119 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 IGHV3-64A0A075B6Q5 118 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.1□□□□□ -1.91
VPS41-205ENST00000414632 A0A0J9YXV3 536 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 MT-ND6P03923 174 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 MRPS36P82909 103 aaKnown RBP3.1□□□□□ -1.91
VPS41-205ENST00000414632 COX6A2Q02221 97 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 PMCHL1Q16048 86 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 TEX43Q6ZNM6 134 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 LINC00173Q6ZV60 143 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 ORAOV1Q8WV07 137 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 TMEM141Q96I45 108 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 CHAC1Q9BUX1 264 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 NXT2Q9NPJ8 142 aaKnown RBP3.1□□□□□ -1.91
VPS41-205ENST00000414632 SMCO4Q9NRQ5 59 aa3.1□□□□□ -1.91
VPS41-205ENST00000414632 FAT3Q8TDW7 4589 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 A0A096LNI7 61 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 IGIPA6NJ69 53 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 ATP5LO75964 103 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 UBE2D1P51668 147 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 SPAG11BQ08648 103 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 COX19Q49B96 90 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 Q6ZN92 141 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 SDIM1Q6ZPB5 146 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 Q6ZRU5 148 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 FA2HQ7L5A8 372 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 C18orf32Q8TCD1 76 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 TOMM6Q96B49 74 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 CARD19Q96LW7 228 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 YPEL4Q96NS1 127 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 SCGB3A1Q96QR1 104 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 CBY1Q9Y3M2 126 aa3.09□□□□□ -1.91
VPS41-205ENST00000414632 HERC1Q15751 4861 aa3.08□□□□□ -1.92
VPS41-205ENST00000414632 IGHV3OR16-9A0A0B4J2B5 98 aa3.08□□□□□ -1.92
VPS41-205ENST00000414632 APOMO95445 188 aa3.08□□□□□ -1.92
VPS41-205ENST00000414632 INAFM2P0DMQ5 153 aa3.08□□□□□ -1.92
VPS41-205ENST00000414632 SYCNQ0VAF6 134 aa3.08□□□□□ -1.92
VPS41-205ENST00000414632 SPACA4Q8TDM5 124 aa3.08□□□□□ -1.92
VPS41-205ENST00000414632 CAMK2N2Q96S95 79 aa3.08□□□□□ -1.92
VPS41-205ENST00000414632 AMELXQ99217 191 aa3.08□□□□□ -1.92
VPS41-205ENST00000414632 LRP1Q07954 4544 aaKnown RBP3.07□□□□□ -1.92
VPS41-205ENST00000414632 A0A096LNJ9 63 aa3.07□□□□□ -1.92
VPS41-205ENST00000414632 A0A1B0GWB2 263 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms