RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 DNAL4O96015 105 aa9.23□□□□□ -0.93
LITAF-203ENST00000413364 MIAQ16674 131 aa9.23□□□□□ -0.93
LITAF-203ENST00000413364 FAM104AQ969W3 186 aa9.23□□□□□ -0.93
LITAF-203ENST00000413364 LITAFQ99732 161 aa9.23□□□□□ -0.93
LITAF-203ENST00000413364 NIPBLQ6KC79 2804 aaeCLIP9.23□□□□□ -0.93
LITAF-203ENST00000413364 NSD1Q96L73 2696 aaPredicted RBP9.23□□□□□ -0.93
LITAF-203ENST00000413364 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
LITAF-203ENST00000413364 BAALC-AS2P0C853 105 aa9.22□□□□□ -0.93
LITAF-203ENST00000413364 FP248Q71RG6 208 aaPredicted RBP9.22□□□□□ -0.93
LITAF-203ENST00000413364 FLNBO75369 2602 aaKnown RBP9.22□□□□□ -0.93
LITAF-203ENST00000413364 FN1P02751 2386 aaKnown RBP9.22□□□□□ -0.93
LITAF-203ENST00000413364 IGHV3-38A0A0C4DH36 116 aa9.22□□□□□ -0.93
LITAF-203ENST00000413364 K7EQD1 137 aa9.22□□□□□ -0.93
LITAF-203ENST00000413364 OVOL2Q9BRP0 275 aa9.22□□□□□ -0.93
LITAF-203ENST00000413364 C2CD3Q4AC94 2353 aa9.22□□□□□ -0.93
LITAF-203ENST00000413364 A0A0U1RRA0 63 aa9.21□□□□□ -0.93
LITAF-203ENST00000413364 UBE2D4Q9Y2X8 147 aa9.21□□□□□ -0.93
LITAF-203ENST00000413364 A0A0J9YXV3 536 aa9.21□□□□□ -0.94
LITAF-203ENST00000413364 C9orf66Q5T8R8 295 aa9.21□□□□□ -0.94
LITAF-203ENST00000413364 FAM19A1Q7Z5A9 133 aa9.21□□□□□ -0.94
LITAF-203ENST00000413364 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.2□□□□□ -0.94
LITAF-203ENST00000413364 IGKV2-29A2NJV5 120 aaPredicted RBP9.2□□□□□ -0.94
LITAF-203ENST00000413364 XCL1P47992 114 aa9.2□□□□□ -0.94
LITAF-203ENST00000413364 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
LITAF-203ENST00000413364 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
LITAF-203ENST00000413364 IGKV3D-7A0A0C4DH55 119 aa9.2□□□□□ -0.94
LITAF-203ENST00000413364 PMAIP1Q13794 54 aa9.2□□□□□ -0.94
LITAF-203ENST00000413364 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.19□□□□□ -0.94
LITAF-203ENST00000413364 SPATA3Q8NHX4 192 aa9.19□□□□□ -0.94
LITAF-203ENST00000413364 HIVEP1P15822 2718 aa9.19□□□□□ -0.94
LITAF-203ENST00000413364 TRGV2A0A075B6R0 118 aa9.19□□□□□ -0.94
LITAF-203ENST00000413364 BCE1O60756 84 aa9.19□□□□□ -0.94
LITAF-203ENST00000413364 GHRHP01286 108 aa9.19□□□□□ -0.94
LITAF-203ENST00000413364 A0A087WVE0 104 aa9.18□□□□□ -0.94
LITAF-203ENST00000413364 H7BZZ5 65 aa9.18□□□□□ -0.94
LITAF-203ENST00000413364 C20orf197Q8N268 126 aa9.18□□□□□ -0.94
LITAF-203ENST00000413364 LAMTOR3Q9UHA4 124 aa9.18□□□□□ -0.94
LITAF-203ENST00000413364 TIMM17BO60830 172 aa9.17□□□□□ -0.94
LITAF-203ENST00000413364 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
LITAF-203ENST00000413364 S100A7L2Q5SY68 101 aa9.17□□□□□ -0.94
LITAF-203ENST00000413364 ATP5EP2Q5VTU8 51 aa9.17□□□□□ -0.94
LITAF-203ENST00000413364 RNASE13Q5GAN3 156 aaKnown RBP9.17□□□□□ -0.94
LITAF-203ENST00000413364 NOTCH3Q9UM47 2321 aa9.16□□□□□ -0.94
LITAF-203ENST00000413364 TRBV6-4A0A1B0GX49 114 aa9.16□□□□□ -0.94
LITAF-203ENST00000413364 IGHV3-30-3P0DP02 117 aa9.16□□□□□ -0.94
LITAF-203ENST00000413364 CYSRT1A8MQ03 144 aa9.15□□□□□ -0.94
LITAF-203ENST00000413364 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.94
LITAF-203ENST00000413364 CD164Q04900 197 aa9.15□□□□□ -0.95
LITAF-203ENST00000413364 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.95
LITAF-203ENST00000413364 TRGV4A0A0C4DH28 118 aa9.14□□□□□ -0.95
LITAF-203ENST00000413364 KLKP1Q107X0 134 aa9.14□□□□□ -0.95
LITAF-203ENST00000413364 DGAT2L7PQ6IED9 249 aa9.14□□□□□ -0.95
LITAF-203ENST00000413364 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
LITAF-203ENST00000413364 IGHV3-64A0A075B6Q5 118 aa9.14□□□□□ -0.95
LITAF-203ENST00000413364 NDUFA12Q9UI09 145 aa9.14□□□□□ -0.95
LITAF-203ENST00000413364 NDUFC1O43677 76 aa9.13□□□□□ -0.95
LITAF-203ENST00000413364 LINC00612Q8N6U2 182 aa9.13□□□□□ -0.95
LITAF-203ENST00000413364 LINC00846Q9NV44 126 aa9.13□□□□□ -0.95
LITAF-203ENST00000413364 CCKP06307 115 aa9.12□□□□□ -0.95
LITAF-203ENST00000413364 X6R8D5 127 aa9.12□□□□□ -0.95
LITAF-203ENST00000413364 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
LITAF-203ENST00000413364 LYPD5Q6UWN5 251 aa9.12□□□□□ -0.95
LITAF-203ENST00000413364 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
LITAF-203ENST00000413364 IGHV1-58A0A0C4DH39 117 aa9.11□□□□□ -0.95
LITAF-203ENST00000413364 TRBV7-6A0A0J9YX20 115 aa9.11□□□□□ -0.95
LITAF-203ENST00000413364 TRAV7A0A075B6U4 112 aa9.11□□□□□ -0.95
LITAF-203ENST00000413364 TRBV10-3A0A0K0K1G6 114 aa9.11□□□□□ -0.95
LITAF-203ENST00000413364 WFDC9Q8NEX5 89 aa9.11□□□□□ -0.95
LITAF-203ENST00000413364 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
LITAF-203ENST00000413364 DEFB130BP0DP73 79 aa9.1□□□□□ -0.95
LITAF-203ENST00000413364 DEFB130AP0DP74 79 aa9.1□□□□□ -0.95
LITAF-203ENST00000413364 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
LITAF-203ENST00000413364 Q6ZRU5 148 aa9.1□□□□□ -0.95
LITAF-203ENST00000413364 IGLV5-45A0A087WSX0 123 aa9.1□□□□□ -0.95
LITAF-203ENST00000413364 RBM3P98179 157 aaKnown RBP9.1□□□□□ -0.95
LITAF-203ENST00000413364 OBSCN-AS1Q96MR7 158 aa9.1□□□□□ -0.95
LITAF-203ENST00000413364 RETNQ9HD89 108 aa9.1□□□□□ -0.95
LITAF-203ENST00000413364 VWFP04275 2813 aa9.09□□□□□ -0.95
LITAF-203ENST00000413364 TENM1Q9UKZ4 2725 aa9.09□□□□□ -0.95
LITAF-203ENST00000413364 APOC4P55056 127 aa9.08□□□□□ -0.96
LITAF-203ENST00000413364 FAM19A3Q7Z5A8 133 aa9.08□□□□□ -0.96
LITAF-203ENST00000413364 UBE2L6O14933 153 aa9.08□□□□□ -0.96
LITAF-203ENST00000413364 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
LITAF-203ENST00000413364 CDC42SE2Q9NRR3 84 aa9.08□□□□□ -0.96
LITAF-203ENST00000413364 CDKN2A-AS1Q9UH64 79 aa9.08□□□□□ -0.96
LITAF-203ENST00000413364 LINC00242Q5T6M2 205 aa9.07□□□□□ -0.96
LITAF-203ENST00000413364 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
LITAF-203ENST00000413364 LINC00474Q9P2X8 69 aa9.07□□□□□ -0.96
LITAF-203ENST00000413364 COX6A2Q02221 97 aa9.06□□□□□ -0.96
LITAF-203ENST00000413364 DEFB135Q30KP9 77 aa9.06□□□□□ -0.96
LITAF-203ENST00000413364 C14orf132Q9NPU4 83 aa9.06□□□□□ -0.96
LITAF-203ENST00000413364 ATRQ13535 2644 aa9.06□□□□□ -0.96
LITAF-203ENST00000413364 LYRM9A8MSI8 78 aa9.06□□□□□ -0.96
LITAF-203ENST00000413364 TEP1Q99973 2627 aaKnown RBP9.05□□□□□ -0.96
LITAF-203ENST00000413364 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
LITAF-203ENST00000413364 SS18Q15532 418 aa9.05□□□□□ -0.96
LITAF-203ENST00000413364 TRAV13-2A0A0B4J235 113 aa9.04□□□□□ -0.96
LITAF-203ENST00000413364 A8MZ25 164 aa9.04□□□□□ -0.96
LITAF-203ENST00000413364 F8P00451 2351 aa9.04□□□□□ -0.96
LITAF-203ENST00000413364 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms