RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 TRGV1A0A0A0MS02 117 aa10.93□□□□□ -0.66
LIMS2-205ENST00000409455 INAFM1C9JVW0 142 aa10.93□□□□□ -0.66
LIMS2-205ENST00000409455 HIVEP1P15822 2718 aa10.93□□□□□ -0.66
LIMS2-205ENST00000409455 A0A087WVE0 104 aa10.93□□□□□ -0.66
LIMS2-205ENST00000409455 A0A1W2PRX2 142 aa10.92□□□□□ -0.66
LIMS2-205ENST00000409455 USP17L23D6RBM5 183 aa10.92□□□□□ -0.66
LIMS2-205ENST00000409455 LECT2O14960 151 aa10.92□□□□□ -0.66
LIMS2-205ENST00000409455 LINC00158P58513 81 aa10.92□□□□□ -0.66
LIMS2-205ENST00000409455 MAP6D1Q9H9H5 199 aa10.92□□□□□ -0.66
LIMS2-205ENST00000409455 TOMM7Q9P0U1 55 aa10.92□□□□□ -0.66
LIMS2-205ENST00000409455 DPH3Q96FX2 82 aa10.91□□□□□ -0.66
LIMS2-205ENST00000409455 LINC01561Q8N1V8 128 aa10.91□□□□□ -0.66
LIMS2-205ENST00000409455 UPK3BQ9BT76 320 aa10.91□□□□□ -0.66
LIMS2-205ENST00000409455 NCR3O14931 201 aa10.9□□□□□ -0.66
LIMS2-205ENST00000409455 KIR2DL5BQ8NHK3 375 aa10.9□□□□□ -0.67
LIMS2-205ENST00000409455 TMEM243Q9BU79 118 aa10.9□□□□□ -0.67
LIMS2-205ENST00000409455 XCL2Q9UBD3 114 aa10.9□□□□□ -0.67
LIMS2-205ENST00000409455 CCL18P55774 89 aa10.89□□□□□ -0.67
LIMS2-205ENST00000409455 SETXQ7Z333 2677 aaKnown RBP10.89□□□□□ -0.67
LIMS2-205ENST00000409455 DYNLRB2Q8TF09 96 aa10.88□□□□□ -0.67
LIMS2-205ENST00000409455 FN1P02751 2386 aaKnown RBP10.88□□□□□ -0.67
LIMS2-205ENST00000409455 ORMDL1Q9P0S3 153 aa10.88□□□□□ -0.67
LIMS2-205ENST00000409455 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
LIMS2-205ENST00000409455 WNK1Q9H4A3 2382 aa10.87□□□□□ -0.67
LIMS2-205ENST00000409455 CCL24O00175 119 aa10.87□□□□□ -0.67
LIMS2-205ENST00000409455 IBA57-AS1B1ANH7 110 aa10.87□□□□□ -0.67
LIMS2-205ENST00000409455 PAX4O43316 350 aa10.87□□□□□ -0.67
LIMS2-205ENST00000409455 DSCR8Q96T75 97 aa10.87□□□□□ -0.67
LIMS2-205ENST00000409455 IL17DQ8TAD2 202 aa10.86□□□□□ -0.67
LIMS2-205ENST00000409455 SLPIP03973 132 aa10.86□□□□□ -0.67
LIMS2-205ENST00000409455 S100A7L2Q5SY68 101 aa10.86□□□□□ -0.67
LIMS2-205ENST00000409455 IGKV3OR2-268A0A0C4DH90 116 aa10.85□□□□□ -0.67
LIMS2-205ENST00000409455 Q6ZTI0 123 aa10.85□□□□□ -0.67
LIMS2-205ENST00000409455 CCKP06307 115 aa10.85□□□□□ -0.67
LIMS2-205ENST00000409455 PFN2P35080 140 aa10.85□□□□□ -0.67
LIMS2-205ENST00000409455 DEFB114Q30KQ6 69 aa10.84□□□□□ -0.67
LIMS2-205ENST00000409455 ATP5EP2Q5VTU8 51 aa10.83□□□□□ -0.68
LIMS2-205ENST00000409455 STHQ8IWL8 128 aa10.83□□□□□ -0.68
LIMS2-205ENST00000409455 C1orf158Q8N1D5 194 aa10.83□□□□□ -0.68
LIMS2-205ENST00000409455 C2CD3Q4AC94 2353 aa10.82□□□□□ -0.68
LIMS2-205ENST00000409455 TRBV6-4A0A1B0GX49 114 aa10.82□□□□□ -0.68
LIMS2-205ENST00000409455 JMJD7-PLA2G4BH0Y9G9 81 aa10.81□□□□□ -0.68
LIMS2-205ENST00000409455 KRTAP10-3P60369 221 aa10.81□□□□□ -0.68
LIMS2-205ENST00000409455 SS18Q15532 418 aa10.81□□□□□ -0.68
LIMS2-205ENST00000409455 NIPBLQ6KC79 2804 aaeCLIP10.81□□□□□ -0.68
LIMS2-205ENST00000409455 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
LIMS2-205ENST00000409455 WIPF1O43516 503 aa10.81□□□□□ -0.68
LIMS2-205ENST00000409455 OXTP01178 125 aa10.8□□□□□ -0.68
LIMS2-205ENST00000409455 GHRHP01286 108 aa10.8□□□□□ -0.68
LIMS2-205ENST00000409455 A0A087WZ39 114 aa10.79□□□□□ -0.68
LIMS2-205ENST00000409455 NOP10Q9NPE3 64 aaKnown RBP10.79□□□□□ -0.68
LIMS2-205ENST00000409455 F8P00451 2351 aa10.79□□□□□ -0.68
LIMS2-205ENST00000409455 NDUFC2O95298 119 aa10.79□□□□□ -0.68
LIMS2-205ENST00000409455 FHL2Q14192 279 aa10.79□□□□□ -0.68
LIMS2-205ENST00000409455 ODF3L2Q3SX64 289 aa10.79□□□□□ -0.68
LIMS2-205ENST00000409455 TRAV23DV6A0A075B6W5 121 aa10.78□□□□□ -0.68
LIMS2-205ENST00000409455 NDUFC2-KCTD14E9PQ53 114 aa10.78□□□□□ -0.68
LIMS2-205ENST00000409455 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.69
LIMS2-205ENST00000409455 TRGV2A0A075B6R0 118 aa10.77□□□□□ -0.69
LIMS2-205ENST00000409455 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.69
LIMS2-205ENST00000409455 TMEM256-PLSCR3K7ERE1 68 aa10.77□□□□□ -0.69
LIMS2-205ENST00000409455 WFDC9Q8NEX5 89 aa10.77□□□□□ -0.69
LIMS2-205ENST00000409455 LINC00167Q96N53 147 aa10.77□□□□□ -0.69
LIMS2-205ENST00000409455 C6orf226Q5I0X4 101 aa10.76□□□□□ -0.69
LIMS2-205ENST00000409455 JMJD1CQ15652 2540 aa10.76□□□□□ -0.69
LIMS2-205ENST00000409455 C4orf26Q17RF5 130 aa10.76□□□□□ -0.69
LIMS2-205ENST00000409455 ENHOQ6UWT2 76 aa10.76□□□□□ -0.69
LIMS2-205ENST00000409455 C11orf68Q9H3H3 251 aaKnown RBP10.76□□□□□ -0.69
LIMS2-205ENST00000409455 Q8N814 137 aa10.75□□□□□ -0.69
LIMS2-205ENST00000409455 UBL5Q9BZL1 73 aa10.75□□□□□ -0.69
LIMS2-205ENST00000409455 TRAV25A0A0B4J276 109 aa10.75□□□□□ -0.69
LIMS2-205ENST00000409455 Q5XG85 94 aa10.74□□□□□ -0.69
LIMS2-205ENST00000409455 FAM19A1Q7Z5A9 133 aa10.74□□□□□ -0.69
LIMS2-205ENST00000409455 TRBV6-8A0A0A6YYG3 113 aa10.74□□□□□ -0.69
LIMS2-205ENST00000409455 TRGV4A0A0C4DH28 118 aa10.73□□□□□ -0.69
LIMS2-205ENST00000409455 TRBV10-3A0A0K0K1G6 114 aa10.73□□□□□ -0.69
LIMS2-205ENST00000409455 LYPD5Q6UWN5 251 aa10.73□□□□□ -0.69
LIMS2-205ENST00000409455 HRCT1Q6UXD1 115 aa10.73□□□□□ -0.69
LIMS2-205ENST00000409455 C20orf197Q8N268 126 aa10.72□□□□□ -0.69
LIMS2-205ENST00000409455 C16orf74Q96GX8 76 aa10.72□□□□□ -0.69
LIMS2-205ENST00000409455 LINC00959A0A1B0GUT2 108 aa10.71□□□□□ -0.7
LIMS2-205ENST00000409455 BAHCC1Q9P281 2608 aa10.7□□□□□ -0.7
LIMS2-205ENST00000409455 NOTCH3Q9UM47 2321 aa10.7□□□□□ -0.7
LIMS2-205ENST00000409455 FAM236DA0A1B0GTK5 79 aa10.69□□□□□ -0.7
LIMS2-205ENST00000409455 IGLV1-51P01701 117 aa10.69□□□□□ -0.7
LIMS2-205ENST00000409455 FAM236CP0DP71 79 aa10.69□□□□□ -0.7
LIMS2-205ENST00000409455 TENM1Q9UKZ4 2725 aa10.69□□□□□ -0.7
LIMS2-205ENST00000409455 NANOS2P60321 138 aaKnown RBP10.68□□□□□ -0.7
LIMS2-205ENST00000409455 Q8IZM0 81 aa10.68□□□□□ -0.7
LIMS2-205ENST00000409455 XCL1P47992 114 aa10.68□□□□□ -0.7
LIMS2-205ENST00000409455 PLAC8L1A1L4L8 177 aa10.67□□□□□ -0.7
LIMS2-205ENST00000409455 CYSRT1A8MQ03 144 aa10.67□□□□□ -0.7
LIMS2-205ENST00000409455 LINC00482Q8N8I6 264 aa10.67□□□□□ -0.7
LIMS2-205ENST00000409455 ATRQ13535 2644 aa10.67□□□□□ -0.7
LIMS2-205ENST00000409455 PRR3P79522 188 aaKnown RBP10.66□□□□□ -0.7
LIMS2-205ENST00000409455 VWFP04275 2813 aa10.66□□□□□ -0.7
LIMS2-205ENST00000409455 SPATA3Q8NHX4 192 aa10.65□□□□□ -0.7
LIMS2-205ENST00000409455 TEP1Q99973 2627 aaKnown RBP10.64□□□□□ -0.71
LIMS2-205ENST00000409455 TRAV7A0A075B6U4 112 aa10.64□□□□□ -0.71
LIMS2-205ENST00000409455 BCE1O60756 84 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms