RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 UBE2DNLQ8IWF7 75 aa9.16□□□□□ -0.94
LIMS1-204ENST00000409441 TRBV20-1A0A075B6N2 111 aa9.15□□□□□ -0.94
LIMS1-204ENST00000409441 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
LIMS1-204ENST00000409441 LELP1Q5T871 98 aa9.15□□□□□ -0.94
LIMS1-204ENST00000409441 COPS9Q8WXC6 57 aa9.15□□□□□ -0.94
LIMS1-204ENST00000409441 Q9H8V8 135 aa9.15□□□□□ -0.94
LIMS1-204ENST00000409441 IGLV4-60A0A075B6I1 120 aa9.14□□□□□ -0.95
LIMS1-204ENST00000409441 LOC107984156A0A0G2JMH3 177 aa9.14□□□□□ -0.95
LIMS1-204ENST00000409441 A0A1B0GUV1 79 aa9.14□□□□□ -0.95
LIMS1-204ENST00000409441 H3BMG7 143 aa9.14□□□□□ -0.95
LIMS1-204ENST00000409441 LY6G6CO95867 125 aa9.14□□□□□ -0.95
LIMS1-204ENST00000409441 ARL17AQ8IVW1 177 aa9.14□□□□□ -0.95
LIMS1-204ENST00000409441 ERG28Q9UKR5 140 aa9.14□□□□□ -0.95
LIMS1-204ENST00000409441 EIF4EBP3O60516 100 aaPredicted RBP9.13□□□□□ -0.95
LIMS1-204ENST00000409441 PRSS2P07478 247 aa9.13□□□□□ -0.95
LIMS1-204ENST00000409441 RBX1P62877 108 aa9.13□□□□□ -0.95
LIMS1-204ENST00000409441 ZNF625Q96I27 306 aaPredicted RBP9.13□□□□□ -0.95
LIMS1-204ENST00000409441 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
LIMS1-204ENST00000409441 LINC00476Q8WZB0 136 aa9.13□□□□□ -0.95
LIMS1-204ENST00000409441 CBY1Q9Y3M2 126 aa9.13□□□□□ -0.95
LIMS1-204ENST00000409441 PLECQ15149 4684 aaKnown RBP9.12□□□□□ -0.95
LIMS1-204ENST00000409441 UPK3BQ9BT76 320 aa9.12□□□□□ -0.95
LIMS1-204ENST00000409441 PRO0461Q9UI25 63 aa9.12□□□□□ -0.95
LIMS1-204ENST00000409441 PSMB2P49721 201 aa9.11□□□□□ -0.95
LIMS1-204ENST00000409441 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
LIMS1-204ENST00000409441 WFDC10BQ8IUB3 73 aa9.1□□□□□ -0.95
LIMS1-204ENST00000409441 COX7B2Q8TF08 81 aa9.1□□□□□ -0.95
LIMS1-204ENST00000409441 A0A087WZ39 114 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 LINC00959A0A1B0GUT2 108 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 SFTA2Q6UW10 78 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 LINC01561Q8N1V8 128 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 TMEM262E9PQX1 116 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 TCL1BO95988 128 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 WFDC2Q14508 124 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 SS18Q15532 418 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 MEIG1Q5JSS6 88 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 LINC00308Q8TCZ7 52 aa9.09□□□□□ -0.95
LIMS1-204ENST00000409441 Q1RN00 199 aa9.08□□□□□ -0.96
LIMS1-204ENST00000409441 IGKV3OR2-268A0A0C4DH90 116 aa9.07□□□□□ -0.96
LIMS1-204ENST00000409441 LCE6AA0A183 80 aa9.07□□□□□ -0.96
LIMS1-204ENST00000409441 RNF151Q2KHN1 245 aa9.07□□□□□ -0.96
LIMS1-204ENST00000409441 DNAH10OSP0CZ25 163 aa9.06□□□□□ -0.96
LIMS1-204ENST00000409441 NPC2P61916 151 aa9.06□□□□□ -0.96
LIMS1-204ENST00000409441 H7C2G1 150 aa9.05□□□□□ -0.96
LIMS1-204ENST00000409441 LINC01556Q5JQF7 62 aa9.05□□□□□ -0.96
LIMS1-204ENST00000409441 Q8N3U1 123 aa9.05□□□□□ -0.96
LIMS1-204ENST00000409441 J3QR89 54 aa9.05□□□□□ -0.96
LIMS1-204ENST00000409441 M0QXV9 152 aa9.05□□□□□ -0.96
LIMS1-204ENST00000409441 DAND5Q8N907 189 aa9.05□□□□□ -0.96
LIMS1-204ENST00000409441 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
LIMS1-204ENST00000409441 COX6CP09669 75 aa9.04□□□□□ -0.96
LIMS1-204ENST00000409441 ATXN8Q156A1 80 aa9.04□□□□□ -0.96
LIMS1-204ENST00000409441 LYSTQ99698 3801 aa9.03□□□□□ -0.96
LIMS1-204ENST00000409441 M0R2N4 97 aa9.03□□□□□ -0.96
LIMS1-204ENST00000409441 TRIAP1O43715 76 aa9.03□□□□□ -0.96
LIMS1-204ENST00000409441 RPL13AP40429 203 aaKnown RBP9.03□□□□□ -0.96
LIMS1-204ENST00000409441 ETDBQ3ZM63 59 aa9.03□□□□□ -0.96
LIMS1-204ENST00000409441 C5orf38Q86SI9 138 aa9.03□□□□□ -0.96
LIMS1-204ENST00000409441 TOMM7Q9P0U1 55 aa9.03□□□□□ -0.96
LIMS1-204ENST00000409441 NBDYA0A0U1RRE5 68 aa9.02□□□□□ -0.96
LIMS1-204ENST00000409441 IBA57-AS1B1ANH7 110 aa9.02□□□□□ -0.96
LIMS1-204ENST00000409441 SOSTDC1Q6X4U4 206 aa9.02□□□□□ -0.96
LIMS1-204ENST00000409441 MTURNQ8N3F0 131 aa9.02□□□□□ -0.96
LIMS1-204ENST00000409441 Q8IZM0 81 aa9.02□□□□□ -0.97
LIMS1-204ENST00000409441 VPS13DQ5THJ4 4388 aa9.01□□□□□ -0.97
LIMS1-204ENST00000409441 A0A0U1RRA0 63 aa9.01□□□□□ -0.97
LIMS1-204ENST00000409441 XCL1P47992 114 aa9.01□□□□□ -0.97
LIMS1-204ENST00000409441 CD164L2Q6UWJ8 174 aa9.01□□□□□ -0.97
LIMS1-204ENST00000409441 LINC01600Q96MT4 127 aa9.01□□□□□ -0.97
LIMS1-204ENST00000409441 KRTAP1-5Q9BYS1 174 aa9.01□□□□□ -0.97
LIMS1-204ENST00000409441 KLK12Q9UKR0 248 aa9.01□□□□□ -0.97
LIMS1-204ENST00000409441 ANGP03950 147 aaKnown RBP9□□□□□ -0.97
LIMS1-204ENST00000409441 TTC32Q5I0X7 151 aa9□□□□□ -0.97
LIMS1-204ENST00000409441 Q6ZR54 194 aa9□□□□□ -0.97
LIMS1-204ENST00000409441 LINC00269Q8N2A0 174 aa9□□□□□ -0.97
LIMS1-204ENST00000409441 REG3AQ06141 175 aa8.99□□□□□ -0.97
LIMS1-204ENST00000409441 LINC01620Q4KN68 170 aa8.99□□□□□ -0.97
LIMS1-204ENST00000409441 C6orf226Q5I0X4 101 aa8.99□□□□□ -0.97
LIMS1-204ENST00000409441 TEN1Q86WV5 123 aa8.99□□□□□ -0.97
LIMS1-204ENST00000409441 ALMS1Q8TCU4 4167 aa8.99□□□□□ -0.97
LIMS1-204ENST00000409441 SLC25A20O43772 301 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 CXCL5P42830 114 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 MIR7-3HGQ8N6C7 128 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 DNAH1Q9P2D7 4330 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 TRAV13-2A0A0B4J235 113 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 C9JAW5 83 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 COX7A2LO14548 114 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 LINC00158P58513 81 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 CLPSL2Q6UWE3 100 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 PPDPFLQ8WWR9 84 aa8.98□□□□□ -0.97
LIMS1-204ENST00000409441 CHCHD10Q8WYQ3 142 aaPredicted RBP8.98□□□□□ -0.97
LIMS1-204ENST00000409441 FOXI1Q12951 378 aa8.97□□□□□ -0.97
LIMS1-204ENST00000409441 UBE2WQ96B02 151 aa8.97□□□□□ -0.97
LIMS1-204ENST00000409441 TRBV10-2A0A0K0K1G8 114 aa8.96□□□□□ -0.98
LIMS1-204ENST00000409441 LST1O00453 97 aa8.96□□□□□ -0.98
LIMS1-204ENST00000409441 ENHOQ6UWT2 76 aa8.96□□□□□ -0.98
LIMS1-204ENST00000409441 PRR34Q9NV39 138 aa8.96□□□□□ -0.98
LIMS1-204ENST00000409441 SND1-IT1Q9HBX3 110 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms