RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 SFTA2Q6UW10 78 aa7.02□□□□□ -1.29
PDE4D-206ENST00000405053 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
PDE4D-206ENST00000405053 CAMK2N2Q96S95 79 aa7.02□□□□□ -1.29
PDE4D-206ENST00000405053 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
PDE4D-206ENST00000405053 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.01□□□□□ -1.29
PDE4D-206ENST00000405053 J3QQQ9 107 aa7.01□□□□□ -1.29
PDE4D-206ENST00000405053 TSPEAR-AS2P59090 65 aa7.01□□□□□ -1.29
PDE4D-206ENST00000405053 KRTAP10-2P60368 255 aa7.01□□□□□ -1.29
PDE4D-206ENST00000405053 CKS1BP61024 79 aa7.01□□□□□ -1.29
PDE4D-206ENST00000405053 ANKRD39Q53RE8 183 aa7.01□□□□□ -1.29
PDE4D-206ENST00000405053 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
PDE4D-206ENST00000405053 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
PDE4D-206ENST00000405053 Q6ZRU5 148 aa7.01□□□□□ -1.29
PDE4D-206ENST00000405053 CARD19Q96LW7 228 aa7.01□□□□□ -1.29
PDE4D-206ENST00000405053 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
PDE4D-206ENST00000405053 TRBV30A0A0K0K1B3 111 aa7□□□□□ -1.29
PDE4D-206ENST00000405053 HSBP1L1C9JCN9 74 aa7□□□□□ -1.29
PDE4D-206ENST00000405053 NMUP48645 174 aa7□□□□□ -1.29
PDE4D-206ENST00000405053 MAJINQ3KP22 176 aa7□□□□□ -1.29
PDE4D-206ENST00000405053 C10orf25Q5T742 122 aa7□□□□□ -1.29
PDE4D-206ENST00000405053 UNQ6190/PRO20217Q6UXQ8 127 aa7□□□□□ -1.29
PDE4D-206ENST00000405053 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
PDE4D-206ENST00000405053 IGLV5-52A0A0A0MRZ9 124 aa6.99□□□□□ -1.29
PDE4D-206ENST00000405053 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
PDE4D-206ENST00000405053 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
PDE4D-206ENST00000405053 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
PDE4D-206ENST00000405053 HERV-K104P63124 156 aa6.98□□□□□ -1.29
PDE4D-206ENST00000405053 MYMXA0A1B0GTQ4 84 aa6.97□□□□□ -1.29
PDE4D-206ENST00000405053 TLX1NBP0CAT3 122 aa6.97□□□□□ -1.29
PDE4D-206ENST00000405053 VAMP8Q9BV40 100 aa6.97□□□□□ -1.29
PDE4D-206ENST00000405053 DYNC1H1Q14204 4646 aaKnown RBP6.96□□□□□ -1.3
PDE4D-206ENST00000405053 SMIM6P0DI80 62 aa6.96□□□□□ -1.3
PDE4D-206ENST00000405053 FUSP35637 526 aaKnown RBP eCLIP6.96□□□□□ -1.3
PDE4D-206ENST00000405053 SDIM1Q6ZPB5 146 aa6.96□□□□□ -1.3
PDE4D-206ENST00000405053 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.3
PDE4D-206ENST00000405053 DNAH8Q96JB1 4490 aa6.95□□□□□ -1.3
PDE4D-206ENST00000405053 GCSHP23434 173 aa6.95□□□□□ -1.3
PDE4D-206ENST00000405053 COX17Q14061 63 aa6.95□□□□□ -1.3
PDE4D-206ENST00000405053 C9orf116Q5BN46 136 aaPredicted RBP6.95□□□□□ -1.3
PDE4D-206ENST00000405053 PCP2Q8IVA1 136 aa6.95□□□□□ -1.3
PDE4D-206ENST00000405053 TTTY13Q9BZ97 58 aa6.95□□□□□ -1.3
PDE4D-206ENST00000405053 PAM16Q9Y3D7 125 aa6.95□□□□□ -1.3
PDE4D-206ENST00000405053 LRP1BQ9NZR2 4599 aa6.95□□□□□ -1.3
PDE4D-206ENST00000405053 LOC107984640A0A0U1RRK4 108 aa6.94□□□□□ -1.3
PDE4D-206ENST00000405053 ZNF815PA8K554 130 aa6.94□□□□□ -1.3
PDE4D-206ENST00000405053 LINC00587B1AMM8 73 aa6.94□□□□□ -1.3
PDE4D-206ENST00000405053 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
PDE4D-206ENST00000405053 SPATA45Q537H7 98 aa6.94□□□□□ -1.3
PDE4D-206ENST00000405053 ERG28Q9UKR5 140 aa6.94□□□□□ -1.3
PDE4D-206ENST00000405053 A0A0J9YXY3 114 aa6.93□□□□□ -1.3
PDE4D-206ENST00000405053 DLEU1O43261 78 aa6.93□□□□□ -1.3
PDE4D-206ENST00000405053 COX8AP10176 69 aa6.93□□□□□ -1.3
PDE4D-206ENST00000405053 LINC01620Q4KN68 170 aa6.93□□□□□ -1.3
PDE4D-206ENST00000405053 BOD1L2Q8IYS8 172 aa6.93□□□□□ -1.3
PDE4D-206ENST00000405053 C16orf90A8MZG2 172 aa6.92□□□□□ -1.3
PDE4D-206ENST00000405053 S100A12P80511 92 aa6.92□□□□□ -1.3
PDE4D-206ENST00000405053 Q6ZRP5 223 aa6.92□□□□□ -1.3
PDE4D-206ENST00000405053 TIMM17BO60830 172 aa6.91□□□□□ -1.3
PDE4D-206ENST00000405053 SMIM13P0DJ93 91 aa6.91□□□□□ -1.3
PDE4D-206ENST00000405053 PFN2P35080 140 aa6.91□□□□□ -1.3
PDE4D-206ENST00000405053 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
PDE4D-206ENST00000405053 KRTAP10-1P60331 282 aa6.91□□□□□ -1.3
PDE4D-206ENST00000405053 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
PDE4D-206ENST00000405053 MEIG1Q5JSS6 88 aa6.91□□□□□ -1.3
PDE4D-206ENST00000405053 Q6ZSA8 131 aa6.91□□□□□ -1.3
PDE4D-206ENST00000405053 LITAFQ99732 161 aa6.91□□□□□ -1.3
PDE4D-206ENST00000405053 EPPK1P58107 5090 aaKnown RBP6.9□□□□□ -1.3
PDE4D-206ENST00000405053 A0A096LNI7 61 aa6.9□□□□□ -1.3
PDE4D-206ENST00000405053 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.3
PDE4D-206ENST00000405053 C14orf144Q96I85 54 aa6.9□□□□□ -1.3
PDE4D-206ENST00000405053 LINC00474Q9P2X8 69 aa6.9□□□□□ -1.3
PDE4D-206ENST00000405053 LINC00158P58513 81 aa6.89□□□□□ -1.31
PDE4D-206ENST00000405053 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
PDE4D-206ENST00000405053 SCGB1D4Q6XE38 83 aa6.89□□□□□ -1.31
PDE4D-206ENST00000405053 LOC107984156A0A0G2JMH3 177 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 PANO1I0J062 215 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 GAGE2EQ4V326 116 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 C9orf129Q5T035 196 aaKnown RBP6.88□□□□□ -1.31
PDE4D-206ENST00000405053 ADAMTSL4-AS1Q5T5F5 129 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 ARL17AQ8IVW1 177 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 MIR7-3HGQ8N6C7 128 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 SPACA4Q8TDM5 124 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 SND1-IT1Q9HBX3 110 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 GAGE2DQ9UEU5 116 aa6.88□□□□□ -1.31
PDE4D-206ENST00000405053 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-206ENST00000405053 IGKV2-24A0A0C4DH68 120 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 A0A0U1RRA0 63 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 TMEM238C9JI98 176 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 CHTF8P0CG12 524 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 C12orf57Q99622 126 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 SPANXCQ9NY87 97 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 FAM30AQ9NZY2 134 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 TP73-AS1Q9UF72 201 aa6.87□□□□□ -1.31
PDE4D-206ENST00000405053 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
PDE4D-206ENST00000405053 Q6ZVH6 145 aa6.86□□□□□ -1.31
PDE4D-206ENST00000405053 LINC00518Q8N0U6 118 aa6.86□□□□□ -1.31
PDE4D-206ENST00000405053 DAND5Q8N907 189 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms